RNA–Protein interactions for RNA: ENST00000359785.9

PTPN22-201, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN22, Length 3,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-201ENST00000359785 KCNK2O95069 426 aa4.52□□□□□ -1.69
PTPN22-201ENST00000359785 BCL10O95999 233 aa4.52□□□□□ -1.69
PTPN22-201ENST00000359785 HLA-DRAP01903 254 aa4.52□□□□□ -1.69
PTPN22-201ENST00000359785 PFKMP08237 780 aa4.52□□□□□ -1.69
PTPN22-201ENST00000359785 GABRB1P18505 474 aa4.52□□□□□ -1.69
PTPN22-201ENST00000359785 POLR2IP36954 125 aaKnown RBP4.52□□□□□ -1.69
PTPN22-201ENST00000359785 RXRGP48443 463 aa4.52□□□□□ -1.69
PTPN22-201ENST00000359785 ALDH18A1P54886 795 aaKnown RBP4.52□□□□□ -1.69
PTPN22-201ENST00000359785 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.52□□□□□ -1.69
PTPN22-201ENST00000359785 MMRN1Q13201 1228 aa4.52□□□□□ -1.69
PTPN22-201ENST00000359785 DAG1Q14118 895 aa4.52□□□□□ -1.69
PTPN22-201ENST00000359785 TTLL9Q3SXZ7 439 aa4.52□□□□□ -1.69
PTPN22-201ENST00000359785 SEZ6Q53EL9 994 aa4.52□□□□□ -1.69
PTPN22-201ENST00000359785 CDKL4Q5MAI5 379 aa4.52□□□□□ -1.69
PTPN22-201ENST00000359785 LRIF1Q5T3J3 769 aa4.52□□□□□ -1.69
PTPN22-201ENST00000359785 ZNF280DQ6N043 979 aa4.52□□□□□ -1.69
PTPN22-201ENST00000359785 BLOC1S3Q6QNY0 202 aa4.52□□□□□ -1.69
PTPN22-201ENST00000359785 RANBP10Q6VN20 620 aa4.52□□□□□ -1.69
PTPN22-201ENST00000359785 HTR3DQ70Z44 454 aa4.52□□□□□ -1.69
PTPN22-201ENST00000359785 C10orf107Q8IVU9 208 aa4.52□□□□□ -1.69
PTPN22-201ENST00000359785 MCOLN3Q8TDD5 553 aa4.52□□□□□ -1.69
PTPN22-201ENST00000359785 SETD7Q8WTS6 366 aaKnown RBP4.52□□□□□ -1.69
PTPN22-201ENST00000359785 UBTD2Q8WUN7 234 aa4.52□□□□□ -1.69
PTPN22-201ENST00000359785 COA7Q96BR5 231 aa4.52□□□□□ -1.69
PTPN22-201ENST00000359785 LCORQ96JN0 433 aaPredicted RBP4.52□□□□□ -1.69
PTPN22-201ENST00000359785 MSLNLQ96KJ4 702 aa4.52□□□□□ -1.69
PTPN22-201ENST00000359785 UBL7Q96S82 380 aaPredicted RBP4.52□□□□□ -1.69
PTPN22-201ENST00000359785 HAPLN2Q9GZV7 340 aa4.52□□□□□ -1.69
PTPN22-201ENST00000359785 FAM49AQ9H0Q0 323 aaPredicted RBP4.52□□□□□ -1.69
PTPN22-201ENST00000359785 MUC3BQ9H195 1237 aa4.52□□□□□ -1.69
PTPN22-201ENST00000359785 LRRC40Q9H9A6 602 aa4.52□□□□□ -1.69
PTPN22-201ENST00000359785 SNX15Q9NRS6 342 aa4.52□□□□□ -1.69
PTPN22-201ENST00000359785 FBXO28Q9NVF7 368 aa4.52□□□□□ -1.69
PTPN22-201ENST00000359785 IFT80Q9P2H3 777 aaPredicted RBP4.52□□□□□ -1.69
PTPN22-201ENST00000359785 NDRG4Q9ULP0 352 aaKnown RBP4.52□□□□□ -1.69
PTPN22-201ENST00000359785 CLEC11AQ9Y240 323 aa4.52□□□□□ -1.69
PTPN22-201ENST00000359785 KCNK7Q9Y2U2 307 aa4.52□□□□□ -1.69
PTPN22-201ENST00000359785 WDR91A4D1P6 747 aa4.51□□□□□ -1.69
PTPN22-201ENST00000359785 STX16-NPEPL1H3BU86 382 aa4.51□□□□□ -1.69
PTPN22-201ENST00000359785 K7ENM7 598 aa4.51□□□□□ -1.69
PTPN22-201ENST00000359785 STX16O14662 325 aa4.51□□□□□ -1.69
PTPN22-201ENST00000359785 SLITRK5O94991 958 aa4.51□□□□□ -1.69
PTPN22-201ENST00000359785 CELF2O95319 508 aaKnown RBP4.51□□□□□ -1.69
PTPN22-201ENST00000359785 ALBP02768 609 aa4.51□□□□□ -1.69
PTPN22-201ENST00000359785 BMP4P12644 408 aa4.51□□□□□ -1.69
PTPN22-201ENST00000359785 NFKB1P19838 968 aa4.51□□□□□ -1.69
PTPN22-201ENST00000359785 EDNRBP24530 442 aa4.51□□□□□ -1.69
PTPN22-201ENST00000359785 PAX6P26367 422 aa4.51□□□□□ -1.69
PTPN22-201ENST00000359785 LRPAP1P30533 357 aa4.51□□□□□ -1.69
PTPN22-201ENST00000359785 ETV3P41162 512 aa4.51□□□□□ -1.69
PTPN22-201ENST00000359785 RPS9P46781 194 aaKnown RBP4.51□□□□□ -1.69
PTPN22-201ENST00000359785 BCAT1P54687 386 aa4.51□□□□□ -1.69
PTPN22-201ENST00000359785 KCNQ4P56696 695 aa4.51□□□□□ -1.69
PTPN22-201ENST00000359785 EIF3EP60228 445 aaKnown RBP4.51□□□□□ -1.69
PTPN22-201ENST00000359785 RBP5P82980 135 aa4.51□□□□□ -1.69
PTPN22-201ENST00000359785 GALK2Q01415 458 aa4.51□□□□□ -1.69
PTPN22-201ENST00000359785 POU4F1Q01851 419 aa4.51□□□□□ -1.69
PTPN22-201ENST00000359785 ZBTB16Q05516 673 aa4.51□□□□□ -1.69
PTPN22-201ENST00000359785 KCNC3Q14003 757 aa4.51□□□□□ -1.69
PTPN22-201ENST00000359785 MBTPS1Q14703 1052 aa4.51□□□□□ -1.69
PTPN22-201ENST00000359785 GRIK5Q16478 980 aa4.51□□□□□ -1.69
PTPN22-201ENST00000359785 UBE2SQ16763 222 aa4.51□□□□□ -1.69
PTPN22-201ENST00000359785 UGP2Q16851 508 aa4.51□□□□□ -1.69
PTPN22-201ENST00000359785 DGUOKQ16854 277 aa4.51□□□□□ -1.69
PTPN22-201ENST00000359785 SMUG1Q53HV7 270 aa4.51□□□□□ -1.69
PTPN22-201ENST00000359785 FGD3Q5JSP0 725 aa4.51□□□□□ -1.69
PTPN22-201ENST00000359785 KIAA0930Q6ICG6 404 aaPredicted RBP4.51□□□□□ -1.69
PTPN22-201ENST00000359785 DENND5BQ6ZUT9 1274 aa4.51□□□□□ -1.69
PTPN22-201ENST00000359785 KCTD8Q6ZWB6 473 aa4.51□□□□□ -1.69
PTPN22-201ENST00000359785 VASH1Q7L8A9 365 aaPredicted RBP4.51□□□□□ -1.69
PTPN22-201ENST00000359785 FAM83AQ86UY5 434 aa4.51□□□□□ -1.69
PTPN22-201ENST00000359785 FUNDC1Q8IVP5 155 aa4.51□□□□□ -1.69
PTPN22-201ENST00000359785 FAM20CQ8IXL6 584 aa4.51□□□□□ -1.69
PTPN22-201ENST00000359785 CENPLQ8N0S6 344 aaPredicted RBP4.51□□□□□ -1.69
PTPN22-201ENST00000359785 EID3Q8N140 333 aa4.51□□□□□ -1.69
PTPN22-201ENST00000359785 MYO1HQ8N1T3 1032 aa4.51□□□□□ -1.69
PTPN22-201ENST00000359785 LIX1Q8N485 282 aa4.51□□□□□ -1.69
PTPN22-201ENST00000359785 CCDC127Q96BQ5 260 aa4.51□□□□□ -1.69
PTPN22-201ENST00000359785 SLC10A4Q96EP9 437 aa4.51□□□□□ -1.69
PTPN22-201ENST00000359785 CERS2Q96G23 380 aa4.51□□□□□ -1.69
PTPN22-201ENST00000359785 AHCYL2Q96HN2 611 aaKnown RBP4.51□□□□□ -1.69
PTPN22-201ENST00000359785 GLT1D1Q96MS3 346 aa4.51□□□□□ -1.69
PTPN22-201ENST00000359785 CDCA4Q9BXL8 241 aa4.51□□□□□ -1.69
PTPN22-201ENST00000359785 DPEP3Q9H4B8 488 aa4.51□□□□□ -1.69
PTPN22-201ENST00000359785 PRDM12Q9H4Q4 367 aa4.51□□□□□ -1.69
PTPN22-201ENST00000359785 POLR1BQ9H9Y6 1135 aa4.51□□□□□ -1.69
PTPN22-201ENST00000359785 ZNF556Q9HAH1 456 aa4.51□□□□□ -1.69
PTPN22-201ENST00000359785 ACP6Q9NPH0 428 aa4.51□□□□□ -1.69
PTPN22-201ENST00000359785 PRDM8Q9NQV8 689 aa4.51□□□□□ -1.69
PTPN22-201ENST00000359785 XPNPEP1Q9NQW7 623 aa4.51□□□□□ -1.69
PTPN22-201ENST00000359785 IGSF5Q9NSI5 407 aa4.51□□□□□ -1.69
PTPN22-201ENST00000359785 MRPS18AQ9NVS2 196 aaKnown RBP4.51□□□□□ -1.69
PTPN22-201ENST00000359785 RHBDL2Q9NX52 303 aa4.51□□□□□ -1.69
PTPN22-201ENST00000359785 SIRT5Q9NXA8 310 aa4.51□□□□□ -1.69
PTPN22-201ENST00000359785 SMPD4Q9NXE4 827 aa4.51□□□□□ -1.69
PTPN22-201ENST00000359785 FBXL12Q9NXK8 326 aa4.51□□□□□ -1.69
PTPN22-201ENST00000359785 SLCO3A1Q9UIG8 710 aa4.51□□□□□ -1.69
PTPN22-201ENST00000359785 DCTN4Q9UJW0 460 aa4.51□□□□□ -1.69
PTPN22-201ENST00000359785 BAG5Q9UL15 447 aa4.51□□□□□ -1.69
PTPN22-201ENST00000359785 CDC14AQ9UNH5 594 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms