RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 GPR63Q9BZJ6 419 aa13.86□□□□□ -0.19
PDLIM5-203ENST00000359265 RHOJQ9H4E5 214 aa13.86□□□□□ -0.19
PDLIM5-203ENST00000359265 C8orf33Q9H7E9 229 aaPredicted RBP13.86□□□□□ -0.19
PDLIM5-203ENST00000359265 FBXO5Q9UKT4 447 aa13.86□□□□□ -0.19
PDLIM5-203ENST00000359265 USP24Q9UPU5 2620 aa13.85□□□□□ -0.19
PDLIM5-203ENST00000359265 TBC1D3BA6NDS4 549 aa13.85□□□□□ -0.19
PDLIM5-203ENST00000359265 BUD23O43709 281 aaKnown RBP13.85□□□□□ -0.19
PDLIM5-203ENST00000359265 SPAG7O75391 227 aa13.85□□□□□ -0.19
PDLIM5-203ENST00000359265 KAT7O95251 611 aa13.85□□□□□ -0.19
PDLIM5-203ENST00000359265 ALPIP09923 528 aa13.85□□□□□ -0.19
PDLIM5-203ENST00000359265 CHN1P15882 459 aa13.85□□□□□ -0.19
PDLIM5-203ENST00000359265 OGNP20774 298 aaKnown RBP13.85□□□□□ -0.19
PDLIM5-203ENST00000359265 CCNFP41002 786 aa13.85□□□□□ -0.19
PDLIM5-203ENST00000359265 GRIA2P42262 883 aa13.85□□□□□ -0.19
PDLIM5-203ENST00000359265 SERPINB8P50452 374 aa13.85□□□□□ -0.19
PDLIM5-203ENST00000359265 ARSDP51689 593 aa13.85□□□□□ -0.19
PDLIM5-203ENST00000359265 SLC18A1P54219 525 aa13.85□□□□□ -0.19
PDLIM5-203ENST00000359265 POLR2LP62875 67 aaKnown RBP13.85□□□□□ -0.19
PDLIM5-203ENST00000359265 TMPRSS15P98073 1019 aa13.85□□□□□ -0.19
PDLIM5-203ENST00000359265 BRAT1Q6PJG6 821 aa13.85□□□□□ -0.19
PDLIM5-203ENST00000359265 GALNT7Q86SF2 657 aa13.85□□□□□ -0.19
PDLIM5-203ENST00000359265 ZC3HC1Q86WB0 502 aaKnown RBP13.85□□□□□ -0.19
PDLIM5-203ENST00000359265 RALGPS2Q86X27 583 aaPredicted RBP13.85□□□□□ -0.19
PDLIM5-203ENST00000359265 DCLK2Q8N568 766 aa13.85□□□□□ -0.19
PDLIM5-203ENST00000359265 ANKRD42Q8N9B4 389 aa13.85□□□□□ -0.19
PDLIM5-203ENST00000359265 OR4K2Q8NGD2 314 aa13.85□□□□□ -0.19
PDLIM5-203ENST00000359265 OR13C4Q8NGS5 318 aa13.85□□□□□ -0.19
PDLIM5-203ENST00000359265 APOPT1Q96IL0 206 aa13.85□□□□□ -0.19
PDLIM5-203ENST00000359265 VPS39Q96JC1 886 aa13.85□□□□□ -0.19
PDLIM5-203ENST00000359265 SERAC1Q96JX3 654 aa13.85□□□□□ -0.19
PDLIM5-203ENST00000359265 TBATAQ96M53 351 aa13.85□□□□□ -0.19
PDLIM5-203ENST00000359265 C19orf43Q9BQ61 176 aa13.85□□□□□ -0.19
PDLIM5-203ENST00000359265 CATSPERZQ9NTU4 200 aa13.85□□□□□ -0.19
PDLIM5-203ENST00000359265 INTS9Q9NV88 658 aaKnown RBP13.85□□□□□ -0.19
PDLIM5-203ENST00000359265 MKS1Q9NXB0 559 aa13.85□□□□□ -0.19
PDLIM5-203ENST00000359265 IL36AQ9UHA7 158 aa13.85□□□□□ -0.19
PDLIM5-203ENST00000359265 PKP3Q9Y446 797 aa13.85□□□□□ -0.19
PDLIM5-203ENST00000359265 PLXNA2O75051 1894 aa13.84□□□□□ -0.19
PDLIM5-203ENST00000359265 PLXNB3Q9ULL4 1909 aa13.84□□□□□ -0.19
PDLIM5-203ENST00000359265 C1orf232A0A0U1RR37 186 aa13.84□□□□□ -0.19
PDLIM5-203ENST00000359265 TSPAN11A1L157 253 aa13.84□□□□□ -0.19
PDLIM5-203ENST00000359265 HMX2A2RU54 273 aa13.84□□□□□ -0.19
PDLIM5-203ENST00000359265 CCDC162PA2VCL2 907 aa13.84□□□□□ -0.19
PDLIM5-203ENST00000359265 GOLGA8RI6L899 631 aa13.84□□□□□ -0.19
PDLIM5-203ENST00000359265 CCL22O00626 93 aa13.84□□□□□ -0.19
PDLIM5-203ENST00000359265 AURKAO14965 403 aa13.84□□□□□ -0.19
PDLIM5-203ENST00000359265 ZWINTO95229 277 aa13.84□□□□□ -0.19
PDLIM5-203ENST00000359265 GOT2P00505 430 aaKnown RBP13.84□□□□□ -0.19
PDLIM5-203ENST00000359265 PYGBP11216 843 aa13.84□□□□□ -0.19
PDLIM5-203ENST00000359265 GLULP15104 373 aa13.84□□□□□ -0.19
PDLIM5-203ENST00000359265 CD151P48509 253 aa13.84□□□□□ -0.19
PDLIM5-203ENST00000359265 GNGT1P63211 74 aa13.84□□□□□ -0.19
PDLIM5-203ENST00000359265 MPP1Q00013 466 aa13.84□□□□□ -0.19
PDLIM5-203ENST00000359265 SLC18A2Q05940 514 aa13.84□□□□□ -0.19
PDLIM5-203ENST00000359265 MESP2Q0VG99 397 aa13.84□□□□□ -0.19
PDLIM5-203ENST00000359265 TDGQ13569 410 aa13.84□□□□□ -0.19
PDLIM5-203ENST00000359265 ZNF234Q14588 700 aa13.84□□□□□ -0.19
PDLIM5-203ENST00000359265 PTPRCAPQ14761 206 aa13.84□□□□□ -0.19
PDLIM5-203ENST00000359265 RSPO4Q2I0M5 234 aaPredicted RBP13.84□□□□□ -0.19
PDLIM5-203ENST00000359265 HNRNPA1L2Q32P51 320 aaKnown RBP13.84□□□□□ -0.19
PDLIM5-203ENST00000359265 MRNIPQ6NTE8 343 aa13.84□□□□□ -0.19
PDLIM5-203ENST00000359265 SERPINA13PQ6UXR4 307 aa13.84□□□□□ -0.19
PDLIM5-203ENST00000359265 LYSMD3Q7Z3D4 306 aa13.84□□□□□ -0.19
PDLIM5-203ENST00000359265 PTAR1Q7Z6K3 402 aaPredicted RBP13.84□□□□□ -0.19
PDLIM5-203ENST00000359265 DENND6AQ8IWF6 608 aa13.84□□□□□ -0.19
PDLIM5-203ENST00000359265 BANPQ8N9N5 519 aa13.84□□□□□ -0.19
PDLIM5-203ENST00000359265 GPR150Q8NGU9 434 aa13.84□□□□□ -0.19
PDLIM5-203ENST00000359265 MDM1Q8TC05 714 aa13.84□□□□□ -0.19
PDLIM5-203ENST00000359265 SCG3Q8WXD2 468 aaKnown RBP13.84□□□□□ -0.19
PDLIM5-203ENST00000359265 OR8D1Q8WZ84 308 aa13.84□□□□□ -0.19
PDLIM5-203ENST00000359265 CDKN2AIPNLQ96HQ2 116 aa13.84□□□□□ -0.19
PDLIM5-203ENST00000359265 SGSM3Q96HU1 749 aa13.84□□□□□ -0.19
PDLIM5-203ENST00000359265 KLHL32Q96NJ5 620 aa13.84□□□□□ -0.19
PDLIM5-203ENST00000359265 SMIM14Q96QK8 99 aa13.84□□□□□ -0.19
PDLIM5-203ENST00000359265 LYSMD1Q96S90 227 aa13.84□□□□□ -0.19
PDLIM5-203ENST00000359265 KLF6Q99612 283 aaPredicted RBP13.84□□□□□ -0.19
PDLIM5-203ENST00000359265 GPR22Q99680 433 aa13.84□□□□□ -0.19
PDLIM5-203ENST00000359265 P2RY13Q9BPV8 354 aa13.84□□□□□ -0.19
PDLIM5-203ENST00000359265 MCMBPQ9BTE3 642 aa13.84□□□□□ -0.19
PDLIM5-203ENST00000359265 IQCGQ9H095 443 aaKnown RBP13.84□□□□□ -0.19
PDLIM5-203ENST00000359265 PSD3Q9NYI0 1048 aa13.84□□□□□ -0.19
PDLIM5-203ENST00000359265 PPIL1Q9Y3C6 166 aa13.84□□□□□ -0.19
PDLIM5-203ENST00000359265 WASF2Q9Y6W5 498 aa13.84□□□□□ -0.19
PDLIM5-203ENST00000359265 FRYLO94915 3013 aa13.84□□□□□ -0.19
PDLIM5-203ENST00000359265 SPECC1L-ADORA2AF8WAN1 911 aa13.83□□□□□ -0.2
PDLIM5-203ENST00000359265 H7C0S8 307 aa13.83□□□□□ -0.2
PDLIM5-203ENST00000359265 COPEO14579 308 aa13.83□□□□□ -0.2
PDLIM5-203ENST00000359265 TPP1O14773 563 aa13.83□□□□□ -0.2
PDLIM5-203ENST00000359265 NPC1O15118 1278 aa13.83□□□□□ -0.2
PDLIM5-203ENST00000359265 TM9SF1O15321 606 aa13.83□□□□□ -0.2
PDLIM5-203ENST00000359265 CD3EAPO15446 510 aaKnown RBP13.83□□□□□ -0.2
PDLIM5-203ENST00000359265 PI15O43692 258 aa13.83□□□□□ -0.2
PDLIM5-203ENST00000359265 TYROBPO43914 113 aa13.83□□□□□ -0.2
PDLIM5-203ENST00000359265 SHOX2O60902 331 aaPredicted RBP13.83□□□□□ -0.2
PDLIM5-203ENST00000359265 LEFTY1O75610 366 aa13.83□□□□□ -0.2
PDLIM5-203ENST00000359265 RFPL1O75677 317 aa13.83□□□□□ -0.2
PDLIM5-203ENST00000359265 LMNAP02545 664 aaKnown RBP13.83□□□□□ -0.2
PDLIM5-203ENST00000359265 PRNPP04156 253 aa13.83□□□□□ -0.2
PDLIM5-203ENST00000359265 ASGR2P07307 311 aa13.83□□□□□ -0.2
PDLIM5-203ENST00000359265 CYP2A6P11509 494 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms