RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 GIMAP2Q9UG22 337 aa11.19□□□□□ -0.62
SSU72-202ENST00000359060 RAI2Q9Y5P3 530 aa11.19□□□□□ -0.62
SSU72-202ENST00000359060 NPEPPSL1A6NEC2 478 aa11.18□□□□□ -0.62
SSU72-202ENST00000359060 CCNT2O60583 730 aaKnown RBP11.18□□□□□ -0.62
SSU72-202ENST00000359060 C1QAP02745 245 aa11.18□□□□□ -0.62
SSU72-202ENST00000359060 HOXB8P17481 243 aaPredicted RBP11.18□□□□□ -0.62
SSU72-202ENST00000359060 VCLP18206 1134 aa11.18□□□□□ -0.62
SSU72-202ENST00000359060 NELFEP18615 380 aaKnown RBP11.18□□□□□ -0.62
SSU72-202ENST00000359060 GABRB3P28472 473 aa11.18□□□□□ -0.62
SSU72-202ENST00000359060 PRDX6P30041 224 aa11.18□□□□□ -0.62
SSU72-202ENST00000359060 PPP1R3AQ16821 1122 aa11.18□□□□□ -0.62
SSU72-202ENST00000359060 AFTPHQ6ULP2 937 aa11.18□□□□□ -0.62
SSU72-202ENST00000359060 FBXO22Q8NEZ5 403 aa11.18□□□□□ -0.62
SSU72-202ENST00000359060 BRSK1Q8TDC3 778 aa11.18□□□□□ -0.62
SSU72-202ENST00000359060 LINGO1Q96FE5 620 aa11.18□□□□□ -0.62
SSU72-202ENST00000359060 C8orf48Q96LL4 319 aa11.18□□□□□ -0.62
SSU72-202ENST00000359060 CCT7Q99832 543 aa11.18□□□□□ -0.62
SSU72-202ENST00000359060 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.18□□□□□ -0.62
SSU72-202ENST00000359060 RNF186Q9NXI6 227 aa11.18□□□□□ -0.62
SSU72-202ENST00000359060 ACTL7AQ9Y615 435 aa11.18□□□□□ -0.62
SSU72-202ENST00000359060 MTMR11A4FU01 709 aa11.18□□□□□ -0.62
SSU72-202ENST00000359060 SLC38A8A6NNN8 435 aa11.18□□□□□ -0.62
SSU72-202ENST00000359060 AOC2O75106 756 aa11.18□□□□□ -0.62
SSU72-202ENST00000359060 CAPN15O75808 1086 aa11.18□□□□□ -0.62
SSU72-202ENST00000359060 UQCRBP14927 111 aa11.18□□□□□ -0.62
SSU72-202ENST00000359060 PSMA4P25789 261 aaKnown RBP11.18□□□□□ -0.62
SSU72-202ENST00000359060 SLC11A1P49279 550 aa11.18□□□□□ -0.62
SSU72-202ENST00000359060 USP41Q3LFD5 358 aa11.18□□□□□ -0.62
SSU72-202ENST00000359060 VPS26BQ4G0F5 336 aa11.18□□□□□ -0.62
SSU72-202ENST00000359060 UGT3A1Q6NUS8 523 aa11.18□□□□□ -0.62
SSU72-202ENST00000359060 PAQR3Q6TCH7 311 aa11.18□□□□□ -0.62
SSU72-202ENST00000359060 DNAJC14Q6Y2X3 702 aaPredicted RBP11.18□□□□□ -0.62
SSU72-202ENST00000359060 LPGAT1Q92604 370 aa11.18□□□□□ -0.62
SSU72-202ENST00000359060 IMP4Q96G21 291 aaKnown RBP11.18□□□□□ -0.62
SSU72-202ENST00000359060 TRMOQ9BU70 441 aa11.18□□□□□ -0.62
SSU72-202ENST00000359060 FKBPLQ9UIM3 349 aa11.18□□□□□ -0.62
SSU72-202ENST00000359060 A0A0J9YYE9 177 aa11.18□□□□□ -0.62
SSU72-202ENST00000359060 E2F6O75461 281 aa11.18□□□□□ -0.62
SSU72-202ENST00000359060 CYBBP04839 570 aa11.18□□□□□ -0.62
SSU72-202ENST00000359060 ITGALP20701 1170 aa11.18□□□□□ -0.62
SSU72-202ENST00000359060 CAPRIN1Q14444 709 aaKnown RBP11.18□□□□□ -0.62
SSU72-202ENST00000359060 THEMIS2Q5TEJ8 643 aa11.18□□□□□ -0.62
SSU72-202ENST00000359060 UMODL1-AS1Q8N2C9 162 aa11.18□□□□□ -0.62
SSU72-202ENST00000359060 MRPS31Q92665 395 aaKnown RBP11.18□□□□□ -0.62
SSU72-202ENST00000359060 OSER1Q9NX31 292 aa11.18□□□□□ -0.62
SSU72-202ENST00000359060 HCSTQ9UBK5 93 aa11.18□□□□□ -0.62
SSU72-202ENST00000359060 MOXD2PA6NHM9 499 aa11.17□□□□□ -0.62
SSU72-202ENST00000359060 CLASP2O75122 1294 aaKnown RBP11.17□□□□□ -0.62
SSU72-202ENST00000359060 CLDN11O75508 207 aa11.17□□□□□ -0.62
SSU72-202ENST00000359060 EPHB3P54753 998 aa11.17□□□□□ -0.62
SSU72-202ENST00000359060 NOGQ13253 232 aa11.17□□□□□ -0.62
SSU72-202ENST00000359060 IRF5Q13568 498 aa11.17□□□□□ -0.62
SSU72-202ENST00000359060 ARHGEF7Q14155 803 aa11.17□□□□□ -0.62
SSU72-202ENST00000359060 GSTA3Q16772 222 aa11.17□□□□□ -0.62
SSU72-202ENST00000359060 CLLU1OSQ5K130 101 aa11.17□□□□□ -0.62
SSU72-202ENST00000359060 ARMC12Q5T9G4 340 aa11.17□□□□□ -0.62
SSU72-202ENST00000359060 EFL1Q7Z2Z2 1120 aaKnown RBP11.17□□□□□ -0.62
SSU72-202ENST00000359060 MAVSQ7Z434 540 aa11.17□□□□□ -0.62
SSU72-202ENST00000359060 HERC6Q8IVU3 1022 aa11.17□□□□□ -0.62
SSU72-202ENST00000359060 MFN1Q8IWA4 741 aa11.17□□□□□ -0.62
SSU72-202ENST00000359060 MYO1HQ8N1T3 1032 aa11.17□□□□□ -0.62
SSU72-202ENST00000359060 OR56A4Q8NGH8 313 aa11.17□□□□□ -0.62
SSU72-202ENST00000359060 TWIST2Q8WVJ9 160 aa11.17□□□□□ -0.62
SSU72-202ENST00000359060 DCUN1D1Q96GG9 259 aa11.17□□□□□ -0.62
SSU72-202ENST00000359060 CDKN2AIPNLQ96HQ2 116 aa11.17□□□□□ -0.62
SSU72-202ENST00000359060 NR1H4Q96RI1 486 aaPredicted RBP11.17□□□□□ -0.62
SSU72-202ENST00000359060 TMEM79Q9BSE2 394 aa11.17□□□□□ -0.62
SSU72-202ENST00000359060 THUMPD3Q9BV44 507 aaKnown RBP11.17□□□□□ -0.62
SSU72-202ENST00000359060 TMEM248Q9NWD8 314 aa11.17□□□□□ -0.62
SSU72-202ENST00000359060 C6orf203Q9P0P8 240 aaPredicted RBP11.17□□□□□ -0.62
SSU72-202ENST00000359060 SH3BP5O60239 455 aa11.17□□□□□ -0.62
SSU72-202ENST00000359060 JUNP05412 331 aaKnown RBP11.17□□□□□ -0.62
SSU72-202ENST00000359060 RETSATQ6NUM9 610 aa11.17□□□□□ -0.62
SSU72-202ENST00000359060 IL27RAQ6UWB1 636 aa11.17□□□□□ -0.62
SSU72-202ENST00000359060 FAM151BQ6UXP7 276 aa11.17□□□□□ -0.62
SSU72-202ENST00000359060 NAT14Q8WUY8 206 aa11.17□□□□□ -0.62
SSU72-202ENST00000359060 DLG3Q92796 817 aa11.17□□□□□ -0.62
SSU72-202ENST00000359060 VPS50Q96JG6 964 aa11.17□□□□□ -0.62
SSU72-202ENST00000359060 ABCG8Q9H221 673 aa11.17□□□□□ -0.62
SSU72-202ENST00000359060 MFSD1Q9H3U5 465 aa11.17□□□□□ -0.62
SSU72-202ENST00000359060 BAG5Q9UL15 447 aa11.17□□□□□ -0.62
SSU72-202ENST00000359060 TRIM17Q9Y577 477 aa11.17□□□□□ -0.62
SSU72-202ENST00000359060 AP4B1Q9Y6B7 739 aa11.17□□□□□ -0.62
SSU72-202ENST00000359060 PIP5K1BO14986 540 aa11.17□□□□□ -0.62
SSU72-202ENST00000359060 INSIG1O15503 277 aa11.17□□□□□ -0.62
SSU72-202ENST00000359060 ETS2P15036 469 aa11.17□□□□□ -0.62
SSU72-202ENST00000359060 MAPKAPK2P49137 400 aa11.17□□□□□ -0.62
SSU72-202ENST00000359060 TTPAP49638 278 aa11.17□□□□□ -0.62
SSU72-202ENST00000359060 ELMOD1Q8N336 334 aa11.17□□□□□ -0.62
SSU72-202ENST00000359060 NKAPQ8N5F7 415 aaKnown RBP11.17□□□□□ -0.62
SSU72-202ENST00000359060 TRIM54Q9BYV2 358 aa11.17□□□□□ -0.62
SSU72-202ENST00000359060 ING2Q9H160 280 aa11.17□□□□□ -0.62
SSU72-202ENST00000359060 MAGEH1Q9H213 219 aa11.17□□□□□ -0.62
SSU72-202ENST00000359060 ASB8Q9H765 288 aa11.17□□□□□ -0.62
SSU72-202ENST00000359060 LRRC14BA6NHZ5 514 aa11.17□□□□□ -0.62
SSU72-202ENST00000359060 LIN7AO14910 233 aaPredicted RBP11.17□□□□□ -0.62
SSU72-202ENST00000359060 GJB3O75712 270 aa11.17□□□□□ -0.62
SSU72-202ENST00000359060 INHAP05111 366 aa11.17□□□□□ -0.62
SSU72-202ENST00000359060 SLC10A3P09131 477 aa11.17□□□□□ -0.62
SSU72-202ENST00000359060 PRSS56P0CW18 603 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms