RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 UROC1Q96N76 676 aa13.72□□□□□ -0.21
VCP-201ENST00000358901 TWNKQ96RR1 684 aa13.72□□□□□ -0.21
VCP-201ENST00000358901 UNC93B1Q9H1C4 597 aa13.72□□□□□ -0.21
VCP-201ENST00000358901 FZD8Q9H461 694 aa13.72□□□□□ -0.21
VCP-201ENST00000358901 PRMT5O14744 637 aaPredicted RBP13.72□□□□□ -0.21
VCP-201ENST00000358901 TBL1XO60907 577 aa13.72□□□□□ -0.21
VCP-201ENST00000358901 KLRC2P26717 231 aa13.72□□□□□ -0.21
VCP-201ENST00000358901 NOS3P29474 1203 aa13.72□□□□□ -0.21
VCP-201ENST00000358901 GRK4P32298 578 aa13.72□□□□□ -0.21
VCP-201ENST00000358901 CYP4F2P78329 520 aa13.72□□□□□ -0.21
VCP-201ENST00000358901 ENPEPQ07075 957 aa13.72□□□□□ -0.21
VCP-201ENST00000358901 CYP4F3Q08477 520 aa13.72□□□□□ -0.21
VCP-201ENST00000358901 KRT73Q86Y46 540 aa13.72□□□□□ -0.21
VCP-201ENST00000358901 ZC3H7AQ8IWR0 971 aaKnown RBP13.72□□□□□ -0.21
VCP-201ENST00000358901 NIPA2Q8N8Q9 360 aa13.72□□□□□ -0.21
VCP-201ENST00000358901 POC5Q8NA72 575 aa13.72□□□□□ -0.21
VCP-201ENST00000358901 FAM81AQ8TBF8 368 aa13.72□□□□□ -0.21
VCP-201ENST00000358901 TWIST2Q8WVJ9 160 aa13.72□□□□□ -0.21
VCP-201ENST00000358901 VPS35Q96QK1 796 aa13.72□□□□□ -0.21
VCP-201ENST00000358901 COPS8Q99627 209 aa13.72□□□□□ -0.21
VCP-201ENST00000358901 ATP13A3Q9H7F0 1226 aa13.72□□□□□ -0.21
VCP-201ENST00000358901 SYNDIG1Q9H7V2 258 aa13.72□□□□□ -0.21
VCP-201ENST00000358901 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.72□□□□□ -0.21
VCP-201ENST00000358901 IKZF3Q9UKT9 509 aa13.72□□□□□ -0.21
VCP-201ENST00000358901 ZNF536O15090 1300 aa13.72□□□□□ -0.21
VCP-201ENST00000358901 TRMUO75648 421 aaKnown RBP13.71□□□□□ -0.21
VCP-201ENST00000358901 CHRNGP07510 517 aa13.71□□□□□ -0.21
VCP-201ENST00000358901 TSPAN19P0C672 248 aa13.71□□□□□ -0.21
VCP-201ENST00000358901 CYP2A6P11509 494 aaPredicted RBP13.71□□□□□ -0.21
VCP-201ENST00000358901 RABGGTBP53611 331 aa13.71□□□□□ -0.21
VCP-201ENST00000358901 SNRPD1P62314 119 aaKnown RBP13.71□□□□□ -0.21
VCP-201ENST00000358901 POM121L1PQ3SYA9 428 aa13.71□□□□□ -0.21
VCP-201ENST00000358901 TMEM198Q66K66 360 aa13.71□□□□□ -0.21
VCP-201ENST00000358901 HIPK1Q86Z02 1210 aa13.71□□□□□ -0.21
VCP-201ENST00000358901 UBR7Q8N806 425 aa13.71□□□□□ -0.21
VCP-201ENST00000358901 DCAKDQ8WVC6 231 aa13.71□□□□□ -0.21
VCP-201ENST00000358901 CD101Q93033 1021 aa13.71□□□□□ -0.21
VCP-201ENST00000358901 HNRNPABQ99729 332 aaKnown RBP13.71□□□□□ -0.21
VCP-201ENST00000358901 LPIN3Q9BQK8 851 aa13.71□□□□□ -0.21
VCP-201ENST00000358901 EHD3Q9NZN3 535 aa13.71□□□□□ -0.21
VCP-201ENST00000358901 ADGRE2Q9UHX3 823 aa13.71□□□□□ -0.21
VCP-201ENST00000358901 MAGEL2Q9UJ55 1249 aa13.71□□□□□ -0.21
VCP-201ENST00000358901 TCAF1Q9Y4C2 921 aa13.71□□□□□ -0.21
VCP-201ENST00000358901 KIF1AQ12756 1690 aa13.71□□□□□ -0.21
VCP-201ENST00000358901 YJEFN3A6XGL0 299 aa13.71□□□□□ -0.21
VCP-201ENST00000358901 ZNF57Q68EA5 555 aaPredicted RBP13.71□□□□□ -0.21
VCP-201ENST00000358901 C6orf89Q6UWU4 347 aa13.71□□□□□ -0.21
VCP-201ENST00000358901 KIAA0408Q6ZU52 694 aa13.71□□□□□ -0.21
VCP-201ENST00000358901 USP50Q70EL3 339 aaPredicted RBP13.71□□□□□ -0.21
VCP-201ENST00000358901 ERLEC1Q96DZ1 483 aa13.71□□□□□ -0.21
VCP-201ENST00000358901 BTBD9Q96Q07 612 aa13.71□□□□□ -0.21
VCP-201ENST00000358901 TMCO1Q9UM00 188 aa13.71□□□□□ -0.21
VCP-201ENST00000358901 SLC28A1O00337 649 aa13.71□□□□□ -0.21
VCP-201ENST00000358901 CAPZA2P47755 286 aa13.71□□□□□ -0.21
VCP-201ENST00000358901 OGDHQ02218 1023 aa13.71□□□□□ -0.21
VCP-201ENST00000358901 PAGE2BQ5JRK9 111 aa13.71□□□□□ -0.21
VCP-201ENST00000358901 CDK20Q8IZL9 346 aa13.71□□□□□ -0.21
VCP-201ENST00000358901 HEXDCQ8WVB3 486 aa13.71□□□□□ -0.21
VCP-201ENST00000358901 PCED1BQ96HM7 432 aa13.71□□□□□ -0.21
VCP-201ENST00000358901 GPR21Q99679 349 aa13.71□□□□□ -0.21
VCP-201ENST00000358901 SPG21Q9NZD8 308 aa13.71□□□□□ -0.21
VCP-201ENST00000358901 ATXN10Q9UBB4 475 aa13.71□□□□□ -0.21
VCP-201ENST00000358901 CCDC189A1A4V9 331 aa13.71□□□□□ -0.22
VCP-201ENST00000358901 NPEPPSL1A6NEC2 478 aa13.71□□□□□ -0.22
VCP-201ENST00000358901 NEMP2A6NFY4 417 aa13.71□□□□□ -0.22
VCP-201ENST00000358901 ANKDD1BA6NHY2 528 aa13.71□□□□□ -0.22
VCP-201ENST00000358901 MMP3P08254 477 aa13.71□□□□□ -0.22
VCP-201ENST00000358901 CNPP09543 421 aaKnown RBP13.71□□□□□ -0.22
VCP-201ENST00000358901 GPX6P59796 221 aa13.71□□□□□ -0.22
VCP-201ENST00000358901 CDC42P60953 191 aa13.71□□□□□ -0.22
VCP-201ENST00000358901 PRKD1Q15139 912 aaPredicted RBP13.71□□□□□ -0.22
VCP-201ENST00000358901 CYP2A13Q16696 494 aa13.71□□□□□ -0.22
VCP-201ENST00000358901 MSS51Q4VC12 460 aa13.71□□□□□ -0.22
VCP-201ENST00000358901 PITRM1Q5JRX3 1037 aa13.71□□□□□ -0.22
VCP-201ENST00000358901 INTS6LQ5JSJ4 861 aaKnown RBP13.71□□□□□ -0.22
VCP-201ENST00000358901 UTS2BQ765I0 119 aa13.71□□□□□ -0.22
VCP-201ENST00000358901 TAC4Q86UU9 113 aa13.71□□□□□ -0.22
VCP-201ENST00000358901 BTN2A3PQ96KV6 586 aa13.71□□□□□ -0.22
VCP-201ENST00000358901 SERHL2Q9H4I8 314 aa13.71□□□□□ -0.22
VCP-201ENST00000358901 SERHLQ9NQF3 203 aa13.71□□□□□ -0.22
VCP-201ENST00000358901 NKX1-2Q9UD57 310 aaPredicted RBP13.71□□□□□ -0.22
VCP-201ENST00000358901 ADAM30Q9UKF2 790 aa13.71□□□□□ -0.22
VCP-201ENST00000358901 RAB26Q9ULW5 256 aa13.71□□□□□ -0.22
VCP-201ENST00000358901 RPP40O75818 363 aaKnown RBP13.7□□□□□ -0.22
VCP-201ENST00000358901 NADKO95544 446 aaPredicted RBP13.7□□□□□ -0.22
VCP-201ENST00000358901 HPGDP15428 266 aa13.7□□□□□ -0.22
VCP-201ENST00000358901 CCNCP24863 283 aa13.7□□□□□ -0.22
VCP-201ENST00000358901 MAPK8P45983 427 aa13.7□□□□□ -0.22
VCP-201ENST00000358901 SLC5A3P53794 718 aa13.7□□□□□ -0.22
VCP-201ENST00000358901 TGM3Q08188 693 aa13.7□□□□□ -0.22
VCP-201ENST00000358901 DUSP4Q13115 394 aa13.7□□□□□ -0.22
VCP-201ENST00000358901 TARBP2Q15633 366 aaKnown RBP13.7□□□□□ -0.22
VCP-201ENST00000358901 XKR6Q5GH73 641 aa13.7□□□□□ -0.22
VCP-201ENST00000358901 LRTOMTQ8WZ04 291 aa13.7□□□□□ -0.22
VCP-201ENST00000358901 RHOBTB2Q9BYZ6 727 aa13.7□□□□□ -0.22
VCP-201ENST00000358901 AFDNP55196 1824 aaKnown RBP13.7□□□□□ -0.22
VCP-201ENST00000358901 ZNF541Q9H0D2 1346 aa13.7□□□□□ -0.22
VCP-201ENST00000358901 COL1A2P08123 1366 aa13.7□□□□□ -0.22
VCP-201ENST00000358901 A0A1B0GW55 424 aa13.7□□□□□ -0.22
VCP-201ENST00000358901 E9PAM4 449 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms