RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 RGS21Q2M5E4 152 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 ZBED5Q49AG3 693 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 TAF2Q6P1X5 1199 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 ERMP1Q7Z2K6 904 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 ZC3H7AQ8IWR0 971 aaKnown RBP6.57□□□□□ -1.36
CSDE1-203ENST00000358528 CHERPQ8IWX8 916 aaKnown RBP6.57□□□□□ -1.36
CSDE1-203ENST00000358528 THEM5Q8N1Q8 247 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 FNDC8Q8TC99 324 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 SEPT8Q92599 483 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 BORCS5Q969J3 196 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 ULK4Q96C45 1275 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 CENPNQ96H22 339 aaPredicted RBP6.57□□□□□ -1.36
CSDE1-203ENST00000358528 COX4I2Q96KJ9 171 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 CDK15Q96Q40 435 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 SEMA3CQ99985 751 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 PRKD2Q9BZL6 878 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 OSBPL2Q9H1P3 480 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 BPIFA1Q9NP55 256 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 TNFRSF12AQ9NP84 129 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 CNGB3Q9NQW8 809 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 NRCAMQ92823 1304 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 C16orf96A6NNT2 1141 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 ENPP3O14638 875 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 FFAR3O14843 346 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 GPR42O15529 346 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 ATE1O95260 518 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 DARSP14868 501 aaKnown RBP6.56□□□□□ -1.36
CSDE1-203ENST00000358528 IL7RP16871 459 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 CDH3P22223 829 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 LHX1P48742 406 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 RENBPP51606 427 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 APLP1P51693 650 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 HK2P52789 917 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 RPL26P61254 145 aaKnown RBP6.56□□□□□ -1.36
CSDE1-203ENST00000358528 LAPTM5Q13571 262 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 RAB39AQ14964 217 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 PABPC1LQ4VXU2 614 aaKnown RBP6.56□□□□□ -1.36
CSDE1-203ENST00000358528 TMTC4Q5T4D3 741 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 GLYATQ6IB77 296 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 ANGPTL8Q6UXH0 198 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 ZDHHC13Q8IUH4 622 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 SMYD1Q8NB12 490 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 METTL6Q8TCB7 284 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 CHID1Q9BWS9 393 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 ZFP14Q9HCL3 533 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 CRTAC1Q9NQ79 661 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 VPS45Q9NRW7 570 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.56□□□□□ -1.364e-7■■■□□ 19.2
CSDE1-203ENST00000358528 IFT80Q9P2H3 777 aaPredicted RBP6.56□□□□□ -1.36
CSDE1-203ENST00000358528 EVLQ9UI08 416 aaPredicted RBP6.56□□□□□ -1.36
CSDE1-203ENST00000358528 CLASP2O75122 1294 aaKnown RBP6.56□□□□□ -1.36
CSDE1-203ENST00000358528 DEAF1O75398 565 aaPredicted RBP6.56□□□□□ -1.36
CSDE1-203ENST00000358528 FCGR1AP12314 374 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 SLC2A4P14672 509 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 FUT4P22083 530 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 HOXA11P31270 313 aaPredicted RBP6.56□□□□□ -1.36
CSDE1-203ENST00000358528 GSK3BP49841 420 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 FOXA1P55317 472 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 RAD51Q06609 339 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 VAC14Q08AM6 782 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 GALNT2Q10471 571 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 TSTA3Q13630 321 aaPredicted RBP6.56□□□□□ -1.36
CSDE1-203ENST00000358528 SNX17Q15036 470 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 FAM187BQ17R55 369 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 RAP1GAP2Q684P5 730 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 TIGD7Q6NT04 549 aaPredicted RBP6.56□□□□□ -1.36
CSDE1-203ENST00000358528 DCLRE1AQ6PJP8 1040 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 IL27RAQ6UWB1 636 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 CLEC14AQ86T13 490 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 CMTR2Q8IYT2 770 aaKnown RBP6.56□□□□□ -1.36
CSDE1-203ENST00000358528 SFRP1Q8N474 314 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 OR13C4Q8NGS5 318 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 CLHC1Q8NHS4 586 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 OSCP1Q8WVF1 389 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 MTFMTQ96DP5 389 aaKnown RBP6.56□□□□□ -1.36
CSDE1-203ENST00000358528 PLEKHA8Q96JA3 519 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 GPATCH1Q9BRR8 931 aaKnown RBP6.56□□□□□ -1.36
CSDE1-203ENST00000358528 KIFC1Q9BW19 673 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 OLAHQ9NV23 265 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 MRGBPQ9NV56 204 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 PNMA8BQ9ULN7 279 aaPredicted RBP6.56□□□□□ -1.36
CSDE1-203ENST00000358528 USP22Q9UPT9 525 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 MAGED1Q9Y5V3 778 aaPredicted RBP6.56□□□□□ -1.36
CSDE1-203ENST00000358528 ARL5AQ9Y689 179 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 UBR3Q6ZT12 1888 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 PRRC2BQ5JSZ5 2229 aaKnown RBP6.56□□□□□ -1.36
CSDE1-203ENST00000358528 LINC00854A0A1B0GVQ3 168 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 MOXD2PA6NHM9 499 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 J3KR12 359 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 SOAT2O75908 522 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 ESRRBO95718 433 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 ZNF682O95780 498 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 PRSS56P0CW18 603 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 SLC10A7Q0GE19 358 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 TSNQ15631 228 aaKnown RBP6.56□□□□□ -1.36
CSDE1-203ENST00000358528 TAF12Q16514 161 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 C10orf120Q5SQS8 335 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 ZNF772Q68DY9 489 aaPredicted RBP6.56□□□□□ -1.36
CSDE1-203ENST00000358528 BNIPLQ7Z465 357 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 GALNT5Q7Z7M9 940 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms