RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 SH3PXD2AQ5TCZ1 1133 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 PAPD7Q5XG87 772 aaKnown RBP9.77□□□□□ -0.85
CHD3-202ENST00000358181 METTL3Q86U44 580 aaKnown RBP9.77□□□□□ -0.85
CHD3-202ENST00000358181 LRRC17Q8N6Y2 441 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 AARSD1Q9BTE6 412 aaKnown RBP9.77□□□□□ -0.85
CHD3-202ENST00000358181 NIFKQ9BYG3 293 aaKnown RBP9.77□□□□□ -0.85
CHD3-202ENST00000358181 THAP2Q9H0W7 228 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 DKKL1Q9UK85 242 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 PHTF1Q9UMS5 762 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 PDE2AO00408 941 aaPredicted RBP9.77□□□□□ -0.85
CHD3-202ENST00000358181 SASH3O75995 380 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 RRM1P23921 792 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 CDH15P55291 814 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 SNU13P55769 128 aaKnown RBP9.77□□□□□ -0.85
CHD3-202ENST00000358181 SPIRE1Q08AE8 756 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 KHDC1LQ5JSQ8 128 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 DHFR2Q86XF0 187 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 FAM13CQ8NE31 585 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 CYP2W1Q8TAV3 490 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 ZHX1-C8orf76Q96EF9 292 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 TIPINQ9BVW5 301 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 CDHR5Q9HBB8 845 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 NYAP2Q9P242 653 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 ACOT9Q9Y305 439 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 KDM6AO15550 1401 aaPredicted RBP9.76□□□□□ -0.85
CHD3-202ENST00000358181 SLC31A1O15431 190 aa9.76□□□□□ -0.85
CHD3-202ENST00000358181 PIRTP0C851 137 aa9.76□□□□□ -0.85
CHD3-202ENST00000358181 VEGFAP15692 232 aaPredicted RBP9.76□□□□□ -0.85
CHD3-202ENST00000358181 AGXTP21549 392 aa9.76□□□□□ -0.85
CHD3-202ENST00000358181 TARBP2Q15633 366 aaKnown RBP9.76□□□□□ -0.85
CHD3-202ENST00000358181 TMED8Q6PL24 325 aaPredicted RBP9.76□□□□□ -0.85
CHD3-202ENST00000358181 PTCHD4Q6ZW05 846 aa9.76□□□□□ -0.85
CHD3-202ENST00000358181 TRAPPC6BQ86SZ2 158 aa9.76□□□□□ -0.85
CHD3-202ENST00000358181 OR5T2Q8NGG2 359 aa9.76□□□□□ -0.85
CHD3-202ENST00000358181 PIH1D2Q8WWB5 315 aa9.76□□□□□ -0.85
CHD3-202ENST00000358181 S100PBPQ96BU1 408 aa9.76□□□□□ -0.85
CHD3-202ENST00000358181 GORASP1Q9BQQ3 440 aa9.76□□□□□ -0.85
CHD3-202ENST00000358181 SEC61A2Q9H9S3 476 aa9.76□□□□□ -0.85
CHD3-202ENST00000358181 ACTR10Q9NZ32 417 aa9.76□□□□□ -0.85
CHD3-202ENST00000358181 SLC16A3O15427 465 aaKnown RBP9.76□□□□□ -0.85
CHD3-202ENST00000358181 VAPBO95292 243 aa9.76□□□□□ -0.85
CHD3-202ENST00000358181 VNN2O95498 520 aa9.76□□□□□ -0.85
CHD3-202ENST00000358181 SYN1P17600 705 aa9.76□□□□□ -0.85
CHD3-202ENST00000358181 DSG2Q14126 1118 aa9.76□□□□□ -0.85
CHD3-202ENST00000358181 DPY19L4Q7Z388 723 aa9.76□□□□□ -0.85
CHD3-202ENST00000358181 DEFB107AQ8IZN7 70 aa9.76□□□□□ -0.85
CHD3-202ENST00000358181 ALG9Q9H6U8 611 aa9.76□□□□□ -0.85
CHD3-202ENST00000358181 VNN3Q9NY84 501 aa9.76□□□□□ -0.85
CHD3-202ENST00000358181 PLK2Q9NYY3 685 aa9.76□□□□□ -0.85
CHD3-202ENST00000358181 IQCF5A8MTL0 148 aa9.76□□□□□ -0.85
CHD3-202ENST00000358181 KPNA4O00629 521 aaPredicted RBP9.76□□□□□ -0.85
CHD3-202ENST00000358181 MICAL2O94851 1124 aa9.76□□□□□ -0.85
CHD3-202ENST00000358181 IRF2P14316 349 aa9.76□□□□□ -0.85
CHD3-202ENST00000358181 RAB4AP20338 218 aa9.76□□□□□ -0.85
CHD3-202ENST00000358181 S100A10P60903 97 aa9.76□□□□□ -0.85
CHD3-202ENST00000358181 NUP54Q7Z3B4 507 aa9.76□□□□□ -0.85
CHD3-202ENST00000358181 ZBTB46Q86UZ6 589 aa9.76□□□□□ -0.85
CHD3-202ENST00000358181 FAM110BQ8TC76 370 aa9.76□□□□□ -0.85
CHD3-202ENST00000358181 HEXDCQ8WVB3 486 aa9.76□□□□□ -0.85
CHD3-202ENST00000358181 BDH2Q9BUT1 245 aa9.76□□□□□ -0.85
CHD3-202ENST00000358181 MORF4L1Q9UBU8 362 aa9.76□□□□□ -0.85
CHD3-202ENST00000358181 RWDD3Q9Y3V2 267 aa9.76□□□□□ -0.85
CHD3-202ENST00000358181 PCDHB3Q9Y5E6 796 aa9.76□□□□□ -0.85
CHD3-202ENST00000358181 CDH16O75309 829 aa9.76□□□□□ -0.85
CHD3-202ENST00000358181 ENTPD3O75355 529 aa9.76□□□□□ -0.85
CHD3-202ENST00000358181 BCAS1O75363 584 aaPredicted RBP9.76□□□□□ -0.85
CHD3-202ENST00000358181 CATP04040 527 aaKnown RBP9.76□□□□□ -0.85
CHD3-202ENST00000358181 ANXA6P08133 673 aa9.76□□□□□ -0.85
CHD3-202ENST00000358181 ETS1P14921 441 aa9.76□□□□□ -0.85
CHD3-202ENST00000358181 SSR2P43308 183 aa9.76□□□□□ -0.85
CHD3-202ENST00000358181 DEFB115Q30KQ5 88 aa9.76□□□□□ -0.85
CHD3-202ENST00000358181 NAIF1Q69YI7 327 aaPredicted RBP9.76□□□□□ -0.85
CHD3-202ENST00000358181 CEP97Q8IW35 865 aa9.76□□□□□ -0.85
CHD3-202ENST00000358181 ASB2Q96Q27 587 aa9.76□□□□□ -0.85
CHD3-202ENST00000358181 TDRD1Q9BXT4 1180 aaKnown RBP9.76□□□□□ -0.85
CHD3-202ENST00000358181 C3orf14Q9HBI5 128 aa9.76□□□□□ -0.85
CHD3-202ENST00000358181 PLEKHA6Q9Y2H5 1048 aa9.76□□□□□ -0.85
CHD3-202ENST00000358181 GRIN2DO15399 1336 aa9.76□□□□□ -0.85
CHD3-202ENST00000358181 C9J4A7 227 aa9.76□□□□□ -0.85
CHD3-202ENST00000358181 E7EQ34 232 aa9.76□□□□□ -0.85
CHD3-202ENST00000358181 PGRMC2O15173 223 aa9.76□□□□□ -0.85
CHD3-202ENST00000358181 TUFMP49411 452 aaKnown RBP9.76□□□□□ -0.85
CHD3-202ENST00000358181 CDKN1CP49918 316 aaPredicted RBP9.76□□□□□ -0.85
CHD3-202ENST00000358181 CLCN7P51798 805 aa9.76□□□□□ -0.85
CHD3-202ENST00000358181 CLVS1Q8IUQ0 354 aaPredicted RBP9.76□□□□□ -0.85
CHD3-202ENST00000358181 ZFPM1Q8IX07 1006 aa9.76□□□□□ -0.85
CHD3-202ENST00000358181 NLGN4XQ8N0W4 816 aa9.76□□□□□ -0.85
CHD3-202ENST00000358181 DNAJA3Q96EY1 480 aa9.76□□□□□ -0.85
CHD3-202ENST00000358181 NDNQ99608 321 aa9.76□□□□□ -0.85
CHD3-202ENST00000358181 METTL8Q9H825 291 aaKnown RBP9.76□□□□□ -0.85
CHD3-202ENST00000358181 WASF3Q9UPY6 502 aa9.76□□□□□ -0.85
CHD3-202ENST00000358181 NEXMIFQ5QGS0 1516 aa9.76□□□□□ -0.85
CHD3-202ENST00000358181 SHOXO15266 292 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 PPP1R37O75864 691 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 ADH1AP07327 375 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 AMPD1P23109 780 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 ST3GAL4Q11206 333 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 NRF1Q16656 503 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 MOB2Q70IA6 237 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 OR5T1Q8NG75 326 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms