RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 HP1BP3Q5SSJ5 553 aaPredicted RBP14.84□□□□□ -0.03
CCNE1-202ENST00000357943 CASC4Q6P4E1 433 aa14.84□□□□□ -0.03
CCNE1-202ENST00000357943 ARMCX6Q7L4S7 300 aa14.84□□□□□ -0.03
CCNE1-202ENST00000357943 IFT20Q8IY31 132 aa14.84□□□□□ -0.03
CCNE1-202ENST00000357943 OR4K2Q8NGD2 314 aa14.84□□□□□ -0.03
CCNE1-202ENST00000357943 SNX19Q92543 992 aa14.84□□□□□ -0.03
CCNE1-202ENST00000357943 UBXN4Q92575 508 aa14.84□□□□□ -0.03
CCNE1-202ENST00000357943 SCAMP4Q969E2 229 aa14.84□□□□□ -0.03
CCNE1-202ENST00000357943 DTD2Q96FN9 168 aa14.84□□□□□ -0.03
CCNE1-202ENST00000357943 HSPA12BQ96MM6 686 aa14.84□□□□□ -0.03
CCNE1-202ENST00000357943 RANBP9Q96S59 729 aa14.84□□□□□ -0.03
CCNE1-202ENST00000357943 WDR83Q9BRX9 315 aaKnown RBP14.84□□□□□ -0.03
CCNE1-202ENST00000357943 DUSP15Q9H1R2 295 aaPredicted RBP14.84□□□□□ -0.03
CCNE1-202ENST00000357943 SLC2A6Q9UGQ3 507 aa14.84□□□□□ -0.03
CCNE1-202ENST00000357943 R4GN57 208 aa14.84□□□□□ -0.03
CCNE1-202ENST00000357943 PLXND1Q9Y4D7 1925 aa14.84□□□□□ -0.03
CCNE1-202ENST00000357943 CCL22O00626 93 aa14.84□□□□□ -0.03
CCNE1-202ENST00000357943 RAD51BO15315 384 aa14.84□□□□□ -0.03
CCNE1-202ENST00000357943 STX7O15400 261 aaKnown RBP14.84□□□□□ -0.03
CCNE1-202ENST00000357943 BPIP17213 487 aa14.84□□□□□ -0.03
CCNE1-202ENST00000357943 MAOBP27338 520 aa14.84□□□□□ -0.03
CCNE1-202ENST00000357943 TMPRSS15P98073 1019 aa14.84□□□□□ -0.03
CCNE1-202ENST00000357943 SGCGQ13326 291 aa14.84□□□□□ -0.03
CCNE1-202ENST00000357943 HLTFQ14527 1009 aaKnown RBP eCLIP14.84□□□□□ -0.03
CCNE1-202ENST00000357943 PMS2CLQ68D20 193 aa14.84□□□□□ -0.03
CCNE1-202ENST00000357943 MICALCLQ6ZW33 695 aa14.84□□□□□ -0.03
CCNE1-202ENST00000357943 CEP68Q76N32 757 aa14.84□□□□□ -0.03
CCNE1-202ENST00000357943 LPCAT2Q7L5N7 544 aa14.84□□□□□ -0.03
CCNE1-202ENST00000357943 PELI3Q8N2H9 469 aa14.84□□□□□ -0.03
CCNE1-202ENST00000357943 GPR26Q8NDV2 337 aa14.84□□□□□ -0.03
CCNE1-202ENST00000357943 PPHLN1Q8NEY8 458 aaKnown RBP14.84□□□□□ -0.03
CCNE1-202ENST00000357943 DNAJC1Q96KC8 554 aaKnown RBP14.84□□□□□ -0.03
CCNE1-202ENST00000357943 MYOCQ99972 504 aa14.84□□□□□ -0.03
CCNE1-202ENST00000357943 ORAI3Q9BRQ5 295 aa14.84□□□□□ -0.03
CCNE1-202ENST00000357943 PCED1AQ9H1Q7 454 aa14.84□□□□□ -0.03
CCNE1-202ENST00000357943 PKD2L2Q9NZM6 624 aa14.84□□□□□ -0.03
CCNE1-202ENST00000357943 NFU1Q9UMS0 254 aa14.84□□□□□ -0.03
CCNE1-202ENST00000357943 FNDC3AQ9Y2H6 1198 aaKnown RBP14.84□□□□□ -0.03
CCNE1-202ENST00000357943 PKP3Q9Y446 797 aa14.84□□□□□ -0.03
CCNE1-202ENST00000357943 MAD1L1Q9Y6D9 718 aa14.84□□□□□ -0.03
CCNE1-202ENST00000357943 SLCO1B1Q9Y6L6 691 aa14.84□□□□□ -0.03
CCNE1-202ENST00000357943 MYLKQ15746 1914 aa14.83□□□□□ -0.04
CCNE1-202ENST00000357943 TRPM6Q9BX84 2022 aa14.83□□□□□ -0.04
CCNE1-202ENST00000357943 A0A1W2PPC4 97 aa14.83□□□□□ -0.04
CCNE1-202ENST00000357943 E7ESA3 106 aa14.83□□□□□ -0.04
CCNE1-202ENST00000357943 PDE1BQ01064 536 aa14.83□□□□□ -0.04
CCNE1-202ENST00000357943 PDIA2Q13087 525 aaKnown RBP14.83□□□□□ -0.04
CCNE1-202ENST00000357943 CUL1Q13616 776 aa14.83□□□□□ -0.04
CCNE1-202ENST00000357943 NAA30Q147X3 362 aaPredicted RBP14.83□□□□□ -0.04
CCNE1-202ENST00000357943 FASTKD3Q14CZ7 662 aaKnown RBP14.83□□□□□ -0.04
CCNE1-202ENST00000357943 AGERQ15109 404 aa14.83□□□□□ -0.04
CCNE1-202ENST00000357943 WSCD2Q2TBF2 565 aa14.83□□□□□ -0.04
CCNE1-202ENST00000357943 SETMARQ53H47 684 aaPredicted RBP14.83□□□□□ -0.04
CCNE1-202ENST00000357943 DNAJC21Q5F1R6 531 aaKnown RBP14.83□□□□□ -0.04
CCNE1-202ENST00000357943 TSTD2Q5T7W7 516 aa14.83□□□□□ -0.04
CCNE1-202ENST00000357943 ESRP1Q6NXG1 681 aaKnown RBP14.83□□□□□ -0.04
CCNE1-202ENST00000357943 CES3Q6UWW8 571 aa14.83□□□□□ -0.04
CCNE1-202ENST00000357943 KDM7AQ6ZMT4 941 aa14.83□□□□□ -0.04
CCNE1-202ENST00000357943 CYP2U1Q7Z449 544 aa14.83□□□□□ -0.04
CCNE1-202ENST00000357943 C11orf74Q86VG3 221 aa14.83□□□□□ -0.04
CCNE1-202ENST00000357943 IGDCC3Q8IVU1 814 aa14.83□□□□□ -0.04
CCNE1-202ENST00000357943 OR13J1Q8NGT2 312 aa14.83□□□□□ -0.04
CCNE1-202ENST00000357943 STYXQ8WUJ0 223 aa14.83□□□□□ -0.04
CCNE1-202ENST00000357943 FOXJ1Q92949 421 aa14.83□□□□□ -0.04
CCNE1-202ENST00000357943 CENPTQ96BT3 561 aa14.83□□□□□ -0.04
CCNE1-202ENST00000357943 NUS1Q96E22 293 aa14.83□□□□□ -0.04
CCNE1-202ENST00000357943 MFSD3Q96ES6 412 aa14.83□□□□□ -0.04
CCNE1-202ENST00000357943 KLF6Q99612 283 aaPredicted RBP14.83□□□□□ -0.04
CCNE1-202ENST00000357943 PRRX2Q99811 253 aa14.83□□□□□ -0.04
CCNE1-202ENST00000357943 KIFC1Q9BW19 673 aa14.83□□□□□ -0.04
CCNE1-202ENST00000357943 ABCG8Q9H221 673 aa14.83□□□□□ -0.04
CCNE1-202ENST00000357943 MBNL1Q9NR56 388 aaKnown RBP14.83□□□□□ -0.04
CCNE1-202ENST00000357943 EIF2B4Q9UI10 523 aaKnown RBP14.83□□□□□ -0.04
CCNE1-202ENST00000357943 SOX13Q9UN79 622 aa14.83□□□□□ -0.04
CCNE1-202ENST00000357943 MEI4A8MW99 385 aa14.82□□□□□ -0.04
CCNE1-202ENST00000357943 NMBRP28336 390 aa14.82□□□□□ -0.04
CCNE1-202ENST00000357943 ELK3P41970 407 aa14.82□□□□□ -0.04
CCNE1-202ENST00000357943 ARSDP51689 593 aa14.82□□□□□ -0.04
CCNE1-202ENST00000357943 SIM2Q14190 667 aaPredicted RBP14.82□□□□□ -0.04
CCNE1-202ENST00000357943 SPDYCQ5MJ68 293 aa14.82□□□□□ -0.04
CCNE1-202ENST00000357943 ALS2CLQ60I27 953 aa14.82□□□□□ -0.04
CCNE1-202ENST00000357943 PRR23BQ6ZRT6 265 aa14.82□□□□□ -0.04
CCNE1-202ENST00000357943 CENPUQ71F23 418 aa14.82□□□□□ -0.04
CCNE1-202ENST00000357943 CCDC25Q86WR0 208 aa14.82□□□□□ -0.04
CCNE1-202ENST00000357943 RAVER1Q8IY67 606 aaKnown RBP14.82□□□□□ -0.04
CCNE1-202ENST00000357943 TP53I13Q8NBR0 393 aaPredicted RBP14.82□□□□□ -0.04
CCNE1-202ENST00000357943 PLA2G15Q8NCC3 412 aa14.82□□□□□ -0.04
CCNE1-202ENST00000357943 PTCD2Q8WV60 388 aaKnown RBP14.82□□□□□ -0.04
CCNE1-202ENST00000357943 ASB12Q8WXK4 309 aa14.82□□□□□ -0.04
CCNE1-202ENST00000357943 AP2M1Q96CW1 435 aa14.82□□□□□ -0.04
CCNE1-202ENST00000357943 ZC3H10Q96K80 434 aaKnown RBP14.82□□□□□ -0.04
CCNE1-202ENST00000357943 IL26Q9NPH9 171 aa14.82□□□□□ -0.04
CCNE1-202ENST00000357943 NLE1Q9NVX2 485 aaPredicted RBP14.82□□□□□ -0.04
CCNE1-202ENST00000357943 SAMD15Q9P1V8 674 aa14.82□□□□□ -0.04
CCNE1-202ENST00000357943 FKBPLQ9UIM3 349 aa14.82□□□□□ -0.04
CCNE1-202ENST00000357943 CHMP2BQ9UQN3 213 aa14.82□□□□□ -0.04
CCNE1-202ENST00000357943 CA5BQ9Y2D0 317 aa14.82□□□□□ -0.04
CCNE1-202ENST00000357943 TEX264Q9Y6I9 313 aa14.82□□□□□ -0.04
CCNE1-202ENST00000357943 DOCK9Q9BZ29 2069 aa14.82□□□□□ -0.04
CCNE1-202ENST00000357943 LRRK1Q38SD2 2015 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms