RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 FXYD1O00168 92 aa17.69■□□□□ 0.42
RTN4-204ENST00000357732 DCKP27707 260 aa17.69■□□□□ 0.42
RTN4-204ENST00000357732 HMOX2P30519 316 aa17.69■□□□□ 0.42
RTN4-204ENST00000357732 GALK1P51570 392 aa17.69■□□□□ 0.42
RTN4-204ENST00000357732 ACVR1Q04771 509 aa17.69■□□□□ 0.42
RTN4-204ENST00000357732 GPR158Q5T848 1215 aa17.69■□□□□ 0.42
RTN4-204ENST00000357732 SPATA19Q7Z5L4 167 aa17.69■□□□□ 0.42
RTN4-204ENST00000357732 PATL1Q86TB9 770 aaKnown RBP17.69■□□□□ 0.42
RTN4-204ENST00000357732 ZNF554Q86TJ5 538 aa17.69■□□□□ 0.42
RTN4-204ENST00000357732 ADGRG5Q8IZF4 528 aa17.69■□□□□ 0.42
RTN4-204ENST00000357732 TWIST2Q8WVJ9 160 aa17.69■□□□□ 0.42
RTN4-204ENST00000357732 LRRC58Q96CX6 371 aa17.69■□□□□ 0.42
RTN4-204ENST00000357732 MS4A4AQ96JQ5 239 aa17.69■□□□□ 0.42
RTN4-204ENST00000357732 C3orf30Q96M34 536 aa17.69■□□□□ 0.42
RTN4-204ENST00000357732 AURKCQ9UQB9 309 aa17.69■□□□□ 0.42
RTN4-204ENST00000357732 MIA3Q5JRA6 1907 aa17.69■□□□□ 0.42
RTN4-204ENST00000357732 CCL15-CCL14A0A0B4J2E2 113 aa17.69■□□□□ 0.42
RTN4-204ENST00000357732 RNF103-CHMP3A0A140T963 221 aa17.69■□□□□ 0.42
RTN4-204ENST00000357732 TRIM64BA6NI03 449 aa17.69■□□□□ 0.42
RTN4-204ENST00000357732 SAC3D1A6NKF1 404 aa17.69■□□□□ 0.42
RTN4-204ENST00000357732 CDK14O94921 469 aa17.69■□□□□ 0.42
RTN4-204ENST00000357732 CYP11A1P05108 521 aa17.69■□□□□ 0.42
RTN4-204ENST00000357732 CD1DP15813 335 aa17.69■□□□□ 0.42
RTN4-204ENST00000357732 SLC6A2P23975 617 aa17.69■□□□□ 0.42
RTN4-204ENST00000357732 PSEN2P49810 448 aa17.69■□□□□ 0.42
RTN4-204ENST00000357732 CLCNKBP51801 687 aa17.69■□□□□ 0.42
RTN4-204ENST00000357732 CDKN2DP55273 166 aa17.69■□□□□ 0.42
RTN4-204ENST00000357732 SH3BP2P78314 561 aa17.69■□□□□ 0.42
RTN4-204ENST00000357732 PRAMEP78395 509 aa17.69■□□□□ 0.42
RTN4-204ENST00000357732 CCL15Q16663 113 aa17.69■□□□□ 0.42
RTN4-204ENST00000357732 EFL1Q7Z2Z2 1120 aaKnown RBP17.69■□□□□ 0.42
RTN4-204ENST00000357732 METTL23Q86XA0 190 aa17.69■□□□□ 0.42
RTN4-204ENST00000357732 TBC1D21Q8IYX1 336 aa17.69■□□□□ 0.42
RTN4-204ENST00000357732 DCP1BQ8IZD4 617 aaKnown RBP17.69■□□□□ 0.42
RTN4-204ENST00000357732 UMODL1-AS1Q8N2C9 162 aa17.69■□□□□ 0.42
RTN4-204ENST00000357732 GPR150Q8NGU9 434 aa17.69■□□□□ 0.42
RTN4-204ENST00000357732 GRIN3AQ8TCU5 1115 aa17.69■□□□□ 0.42
RTN4-204ENST00000357732 SLC39A3Q9BRY0 314 aa17.69■□□□□ 0.42
RTN4-204ENST00000357732 TFB2MQ9H5Q4 396 aaKnown RBP17.69■□□□□ 0.42
RTN4-204ENST00000357732 FBRSL1Q9HCM7 1045 aaKnown RBP17.69■□□□□ 0.42
RTN4-204ENST00000357732 RGS18Q9NS28 235 aa17.69■□□□□ 0.42
RTN4-204ENST00000357732 FAIMQ9NVQ4 179 aa17.69■□□□□ 0.42
RTN4-204ENST00000357732 INTS10Q9NVR2 710 aaKnown RBP17.69■□□□□ 0.42
RTN4-204ENST00000357732 DSEQ9UL01 958 aa17.69■□□□□ 0.42
RTN4-204ENST00000357732 PCDHA9Q9Y5H5 950 aa17.69■□□□□ 0.42
RTN4-204ENST00000357732 ATP6AP2A0A1C7CYW4 349 aa17.68■□□□□ 0.42
RTN4-204ENST00000357732 E9PAM4 449 aa17.68■□□□□ 0.42
RTN4-204ENST00000357732 ATP6AP2O75787 350 aa17.68■□□□□ 0.42
RTN4-204ENST00000357732 PEX11BO96011 259 aa17.68■□□□□ 0.42
RTN4-204ENST00000357732 GFAPP14136 432 aa17.68■□□□□ 0.42
RTN4-204ENST00000357732 CAPN3P20807 821 aa17.68■□□□□ 0.42
RTN4-204ENST00000357732 FSCN1Q16658 493 aaKnown RBP17.68■□□□□ 0.42
RTN4-204ENST00000357732 BLOC1S3Q6QNY0 202 aa17.68■□□□□ 0.42
RTN4-204ENST00000357732 TMEM207Q6UWW9 146 aa17.68■□□□□ 0.42
RTN4-204ENST00000357732 RPS27LQ71UM5 84 aaKnown RBP17.68■□□□□ 0.42
RTN4-204ENST00000357732 BRI3BPQ8WY22 251 aa17.68■□□□□ 0.42
RTN4-204ENST00000357732 C12orf43Q96C57 262 aaKnown RBP17.68■□□□□ 0.42
RTN4-204ENST00000357732 ATXN3LQ9H3M9 355 aa17.68■□□□□ 0.42
RTN4-204ENST00000357732 ARPC2O15144 300 aa17.68■□□□□ 0.42
RTN4-204ENST00000357732 NPPAP01160 153 aa17.68■□□□□ 0.42
RTN4-204ENST00000357732 ARSAP15289 507 aa17.68■□□□□ 0.42
RTN4-204ENST00000357732 NELFEP18615 380 aaKnown RBP17.68■□□□□ 0.42
RTN4-204ENST00000357732 CAPGP40121 348 aa17.68■□□□□ 0.42
RTN4-204ENST00000357732 AFF1P51825 1210 aaKnown RBP17.68■□□□□ 0.42
RTN4-204ENST00000357732 CDH15P55291 814 aa17.68■□□□□ 0.42
RTN4-204ENST00000357732 TMED1Q13445 227 aa17.68■□□□□ 0.42
RTN4-204ENST00000357732 BTG3Q14201 252 aaPredicted RBP17.68■□□□□ 0.42
RTN4-204ENST00000357732 Q6ZNX1 250 aa17.68■□□□□ 0.42
RTN4-204ENST00000357732 USP50Q70EL3 339 aaPredicted RBP17.68■□□□□ 0.42
RTN4-204ENST00000357732 SPPL2CQ8IUH8 684 aa17.68■□□□□ 0.42
RTN4-204ENST00000357732 SMYD1Q8NB12 490 aa17.68■□□□□ 0.42
RTN4-204ENST00000357732 TADA1Q96BN2 335 aa17.68■□□□□ 0.42
RTN4-204ENST00000357732 KATNAL1Q9BW62 490 aa17.68■□□□□ 0.42
RTN4-204ENST00000357732 NPLQ9BXD5 320 aaPredicted RBP17.68■□□□□ 0.42
RTN4-204ENST00000357732 ZNF408Q9H9D4 720 aa17.68■□□□□ 0.42
RTN4-204ENST00000357732 PFDN4Q9NQP4 134 aa17.68■□□□□ 0.42
RTN4-204ENST00000357732 POLR3BQ9NW08 1133 aaPredicted RBP17.68■□□□□ 0.42
RTN4-204ENST00000357732 CMTM6Q9NX76 183 aa17.68■□□□□ 0.42
RTN4-204ENST00000357732 SMPD3Q9NY59 655 aaPredicted RBP17.68■□□□□ 0.42
RTN4-204ENST00000357732 RIMKLBQ9ULI2 386 aa17.68■□□□□ 0.42
RTN4-204ENST00000357732 GIT1Q9Y2X7 761 aa17.68■□□□□ 0.42
RTN4-204ENST00000357732 A0A1W2PP18 115 aa17.67■□□□□ 0.42
RTN4-204ENST00000357732 GRXCR2A6NFK2 248 aa17.67■□□□□ 0.42
RTN4-204ENST00000357732 RFC2P35250 354 aa17.67■□□□□ 0.42
RTN4-204ENST00000357732 EEFSECP57772 596 aaKnown RBP17.67■□□□□ 0.42
RTN4-204ENST00000357732 PCSK7Q16549 785 aa17.67■□□□□ 0.42
RTN4-204ENST00000357732 PLEKHH3Q7Z736 793 aa17.67■□□□□ 0.42
RTN4-204ENST00000357732 DHRSXQ8N5I4 330 aa17.67■□□□□ 0.42
RTN4-204ENST00000357732 PTGR2Q8N8N7 351 aaPredicted RBP17.67■□□□□ 0.42
RTN4-204ENST00000357732 PTERQ96BW5 349 aa17.67■□□□□ 0.42
RTN4-204ENST00000357732 PLEKHG4BQ96PX9 1271 aa17.67■□□□□ 0.42
RTN4-204ENST00000357732 PKMYT1Q99640 499 aa17.67■□□□□ 0.42
RTN4-204ENST00000357732 RTP3Q9BQQ7 232 aa17.67■□□□□ 0.42
RTN4-204ENST00000357732 CXorf21Q9HAI6 301 aa17.67■□□□□ 0.42
RTN4-204ENST00000357732 MID1IP1Q9NPA3 183 aa17.67■□□□□ 0.42
RTN4-204ENST00000357732 H0YAE9 185 aa17.67■□□□□ 0.42
RTN4-204ENST00000357732 PIP5K1BO14986 540 aa17.67■□□□□ 0.42
RTN4-204ENST00000357732 ACOX3O15254 700 aa17.67■□□□□ 0.42
RTN4-204ENST00000357732 CLOCKO15516 846 aa17.67■□□□□ 0.42
RTN4-204ENST00000357732 CBFA2T3O75081 653 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms