RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 TAS2R13Q9NYV9 303 aa9.19□□□□□ -0.94
UPF2-202ENST00000357604 INVSQ9Y283 1065 aa9.19□□□□□ -0.94
UPF2-202ENST00000357604 SPACA6W5XKT8 324 aa9.19□□□□□ -0.94
UPF2-202ENST00000357604 CCDC163A0A0D9SF12 145 aa9.19□□□□□ -0.94
UPF2-202ENST00000357604 GOLGA8QA0A0J9YX86 632 aa9.19□□□□□ -0.94
UPF2-202ENST00000357604 GOLGA8OA6NCC3 632 aa9.19□□□□□ -0.94
UPF2-202ENST00000357604 GOLGA8NF8WBI6 632 aa9.19□□□□□ -0.94
UPF2-202ENST00000357604 H0Y858 1186 aa9.19□□□□□ -0.94
UPF2-202ENST00000357604 INPP4BO15327 924 aa9.19□□□□□ -0.94
UPF2-202ENST00000357604 MAGEA4P43358 317 aa9.19□□□□□ -0.94
UPF2-202ENST00000357604 CCT5P48643 541 aa9.19□□□□□ -0.94
UPF2-202ENST00000357604 TMEM52BQ4KMG9 183 aa9.19□□□□□ -0.94
UPF2-202ENST00000357604 FAM151BQ6UXP7 276 aa9.19□□□□□ -0.94
UPF2-202ENST00000357604 OTOAQ7RTW8 1153 aa9.19□□□□□ -0.94
UPF2-202ENST00000357604 LRRTM4Q86VH4 590 aa9.19□□□□□ -0.94
UPF2-202ENST00000357604 RIBC1Q8N443 379 aaPredicted RBP9.19□□□□□ -0.94
UPF2-202ENST00000357604 WDR24Q96S15 920 aa9.19□□□□□ -0.94
UPF2-202ENST00000357604 APOL2Q9BQE5 337 aa9.19□□□□□ -0.94
UPF2-202ENST00000357604 HERPUD2Q9BSE4 406 aa9.19□□□□□ -0.94
UPF2-202ENST00000357604 TRIM51Q9BSJ1 452 aa9.19□□□□□ -0.94
UPF2-202ENST00000357604 CNOT10Q9H9A5 744 aaKnown RBP9.19□□□□□ -0.94
UPF2-202ENST00000357604 USP29Q9HBJ7 922 aa9.19□□□□□ -0.94
UPF2-202ENST00000357604 NOD2Q9HC29 1040 aa9.19□□□□□ -0.94
UPF2-202ENST00000357604 EML4Q9HC35 981 aaKnown RBP9.19□□□□□ -0.94
UPF2-202ENST00000357604 ZNF212Q9UDV6 495 aa9.19□□□□□ -0.94
UPF2-202ENST00000357604 CHMP2BQ9UQN3 213 aa9.19□□□□□ -0.94
UPF2-202ENST00000357604 A0A087X1B8 175 aa9.18□□□□□ -0.94
UPF2-202ENST00000357604 USP27XA6NNY8 438 aa9.18□□□□□ -0.94
UPF2-202ENST00000357604 VEGFDO43915 354 aa9.18□□□□□ -0.94
UPF2-202ENST00000357604 MAFKO60675 156 aa9.18□□□□□ -0.94
UPF2-202ENST00000357604 PECAM1P16284 738 aaPredicted RBP9.18□□□□□ -0.94
UPF2-202ENST00000357604 CRABP2P29373 138 aa9.18□□□□□ -0.94
UPF2-202ENST00000357604 LIG3P49916 1009 aa9.18□□□□□ -0.94
UPF2-202ENST00000357604 TTC19Q6DKK2 380 aaPredicted RBP9.18□□□□□ -0.94
UPF2-202ENST00000357604 PKN3Q6P5Z2 889 aa9.18□□□□□ -0.94
UPF2-202ENST00000357604 CAMK1DQ8IU85 385 aa9.18□□□□□ -0.94
UPF2-202ENST00000357604 ANKMY2Q8IV38 441 aa9.18□□□□□ -0.94
UPF2-202ENST00000357604 ZNF366Q8N895 744 aa9.18□□□□□ -0.94
UPF2-202ENST00000357604 SNX31Q8N9S9 440 aa9.18□□□□□ -0.94
UPF2-202ENST00000357604 OR52K1Q8NGK4 314 aa9.18□□□□□ -0.94
UPF2-202ENST00000357604 MCOLN3Q8TDD5 553 aa9.18□□□□□ -0.94
UPF2-202ENST00000357604 GABRG3Q99928 467 aa9.18□□□□□ -0.94
UPF2-202ENST00000357604 PCDH12Q9NPG4 1184 aa9.18□□□□□ -0.94
UPF2-202ENST00000357604 FAM72CH0Y354 149 aa9.18□□□□□ -0.94
UPF2-202ENST00000357604 AP1G1O43747 822 aa9.18□□□□□ -0.94
UPF2-202ENST00000357604 MOSPD3O75425 235 aa9.18□□□□□ -0.94
UPF2-202ENST00000357604 STAMBPO95630 424 aa9.18□□□□□ -0.94
UPF2-202ENST00000357604 LMNAP02545 664 aaKnown RBP9.18□□□□□ -0.94
UPF2-202ENST00000357604 MPOP05164 745 aa9.18□□□□□ -0.94
UPF2-202ENST00000357604 MTAPQ13126 283 aa9.18□□□□□ -0.94
UPF2-202ENST00000357604 FAM72AQ5TYM5 149 aa9.18□□□□□ -0.94
UPF2-202ENST00000357604 FAM72DQ6L9T8 149 aa9.18□□□□□ -0.94
UPF2-202ENST00000357604 MARK2Q7KZI7 788 aaKnown RBP9.18□□□□□ -0.94
UPF2-202ENST00000357604 TMEM150AQ86TG1 271 aa9.18□□□□□ -0.94
UPF2-202ENST00000357604 NLRP14Q86W24 1093 aa9.18□□□□□ -0.94
UPF2-202ENST00000357604 TRIM69Q86WT6 500 aa9.18□□□□□ -0.94
UPF2-202ENST00000357604 FAM72BQ86X60 149 aa9.18□□□□□ -0.94
UPF2-202ENST00000357604 RBM12BQ8IXT5 1001 aaKnown RBP9.18□□□□□ -0.94
UPF2-202ENST00000357604 PQLC3Q8N755 202 aa9.18□□□□□ -0.94
UPF2-202ENST00000357604 SORCS1Q8WY21 1168 aa9.18□□□□□ -0.94
UPF2-202ENST00000357604 CCDC3Q9BQI4 270 aa9.18□□□□□ -0.94
UPF2-202ENST00000357604 BPIFA1Q9NP55 256 aa9.18□□□□□ -0.94
UPF2-202ENST00000357604 CD3EAPO15446 510 aaKnown RBP9.18□□□□□ -0.94
UPF2-202ENST00000357604 SH3BP5O60239 455 aa9.18□□□□□ -0.94
UPF2-202ENST00000357604 OGNP20774 298 aaKnown RBP9.18□□□□□ -0.94
UPF2-202ENST00000357604 RPL22P35268 128 aaKnown RBP9.18□□□□□ -0.94
UPF2-202ENST00000357604 PITX1P78337 314 aaPredicted RBP9.18□□□□□ -0.94
UPF2-202ENST00000357604 SKOR1P84550 965 aa9.18□□□□□ -0.94
UPF2-202ENST00000357604 RBBP7Q16576 425 aa9.18□□□□□ -0.94
UPF2-202ENST00000357604 TSNAXIP1Q2TAA8 658 aa9.18□□□□□ -0.94
UPF2-202ENST00000357604 AGAP9Q5VTM2 703 aa9.18□□□□□ -0.94
UPF2-202ENST00000357604 RNF43Q68DV7 783 aa9.18□□□□□ -0.94
UPF2-202ENST00000357604 OR10G6Q8NH81 332 aa9.18□□□□□ -0.94
UPF2-202ENST00000357604 WDR48Q8TAF3 677 aa9.18□□□□□ -0.94
UPF2-202ENST00000357604 DENND1AQ8TEH3 1009 aa9.18□□□□□ -0.94
UPF2-202ENST00000357604 COG1Q8WTW3 980 aa9.18□□□□□ -0.94
UPF2-202ENST00000357604 REPS1Q96D71 796 aa9.18□□□□□ -0.94
UPF2-202ENST00000357604 SLC38A3Q99624 504 aa9.18□□□□□ -0.94
UPF2-202ENST00000357604 DPYSL5Q9BPU6 564 aa9.18□□□□□ -0.94
UPF2-202ENST00000357604 POLR3BQ9NW08 1133 aaPredicted RBP9.18□□□□□ -0.94
UPF2-202ENST00000357604 CD274Q9NZQ7 290 aa9.18□□□□□ -0.94
UPF2-202ENST00000357604 REXO2Q9Y3B8 237 aaKnown RBP9.18□□□□□ -0.94
UPF2-202ENST00000357604 TCAF1Q9Y4C2 921 aa9.18□□□□□ -0.94
UPF2-202ENST00000357604 CAPN8A6NHC0 703 aa9.18□□□□□ -0.94
UPF2-202ENST00000357604 MYO1DO94832 1006 aa9.18□□□□□ -0.94
UPF2-202ENST00000357604 CATP04040 527 aaKnown RBP9.18□□□□□ -0.94
UPF2-202ENST00000357604 CD38P28907 300 aa9.18□□□□□ -0.94
UPF2-202ENST00000357604 RACK1P63244 317 aaKnown RBP9.18□□□□□ -0.94
UPF2-202ENST00000357604 SYT12Q8IV01 421 aa9.18□□□□□ -0.94
UPF2-202ENST00000357604 HSPA12BQ96MM6 686 aa9.18□□□□□ -0.94
UPF2-202ENST00000357604 TCF12Q99081 682 aa9.18□□□□□ -0.94
UPF2-202ENST00000357604 RIOK2Q9BVS4 552 aaKnown RBP9.18□□□□□ -0.94
UPF2-202ENST00000357604 GPN3Q9UHW5 284 aaPredicted RBP9.18□□□□□ -0.94
UPF2-202ENST00000357604 GPR34Q9UPC5 381 aa9.18□□□□□ -0.94
UPF2-202ENST00000357604 PCDHGA5Q9Y5G8 931 aa9.18□□□□□ -0.94
UPF2-202ENST00000357604 RAD51CO43502 376 aa9.18□□□□□ -0.94
UPF2-202ENST00000357604 TPH1P17752 444 aa9.18□□□□□ -0.94
UPF2-202ENST00000357604 KRT71Q3SY84 523 aa9.18□□□□□ -0.94
UPF2-202ENST00000357604 TMEM164Q5U3C3 297 aa9.18□□□□□ -0.94
UPF2-202ENST00000357604 IRAK1BP1Q5VVH5 260 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms