RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 RASAL3Q86YV0 1011 aa12.85□□□□□ -0.35
SMC4-202ENST00000357388 C10orf107Q8IVU9 208 aa12.85□□□□□ -0.35
SMC4-202ENST00000357388 DSELQ8IZU8 1212 aa12.85□□□□□ -0.35
SMC4-202ENST00000357388 CXorf40BQ96DE9 158 aa12.85□□□□□ -0.35
SMC4-202ENST00000357388 LMAN2LQ9H0V9 348 aa12.85□□□□□ -0.35
SMC4-202ENST00000357388 NKIRAS2Q9NYR9 191 aa12.85□□□□□ -0.35
SMC4-202ENST00000357388 CDH22Q9UJ99 828 aa12.85□□□□□ -0.35
SMC4-202ENST00000357388 RBM7Q9Y580 266 aaKnown RBP12.85□□□□□ -0.35
SMC4-202ENST00000357388 LRRC10BA6NIK2 292 aa12.85□□□□□ -0.35
SMC4-202ENST00000357388 PLOD2O00469 737 aa12.85□□□□□ -0.35
SMC4-202ENST00000357388 ZMPSTE24O75844 475 aa12.85□□□□□ -0.35
SMC4-202ENST00000357388 HTR1BP28222 390 aa12.85□□□□□ -0.35
SMC4-202ENST00000357388 TPTEP56180 551 aa12.85□□□□□ -0.35
SMC4-202ENST00000357388 RPL38P63173 70 aaKnown RBP12.85□□□□□ -0.35
SMC4-202ENST00000357388 TMEM44Q2T9K0 475 aa12.85□□□□□ -0.35
SMC4-202ENST00000357388 GPAT3Q53EU6 434 aa12.85□□□□□ -0.35
SMC4-202ENST00000357388 DNAJB7Q7Z6W7 309 aaPredicted RBP12.85□□□□□ -0.35
SMC4-202ENST00000357388 ITFG2Q969R8 447 aa12.85□□□□□ -0.35
SMC4-202ENST00000357388 MARK4Q96L34 752 aa12.85□□□□□ -0.35
SMC4-202ENST00000357388 ARL8BQ9NVJ2 186 aa12.85□□□□□ -0.35
SMC4-202ENST00000357388 E7ENX8 843 aa12.85□□□□□ -0.35
SMC4-202ENST00000357388 ALOX15BO15296 676 aa12.85□□□□□ -0.35
SMC4-202ENST00000357388 UGT2B17O75795 530 aa12.85□□□□□ -0.35
SMC4-202ENST00000357388 RPLP0P05388 317 aaKnown RBP12.85□□□□□ -0.35
SMC4-202ENST00000357388 YBX3P16989 372 aaKnown RBP eCLIP12.85□□□□□ -0.351e-12■■■■□ 23.5
SMC4-202ENST00000357388 NPR2P20594 1047 aa12.85□□□□□ -0.35
SMC4-202ENST00000357388 RPS9P46781 194 aaKnown RBP12.85□□□□□ -0.35
SMC4-202ENST00000357388 PPP2R2BQ00005 443 aa12.85□□□□□ -0.35
SMC4-202ENST00000357388 ZNF613Q6PF04 617 aa12.85□□□□□ -0.35
SMC4-202ENST00000357388 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.85□□□□□ -0.35
SMC4-202ENST00000357388 TRAPPC5Q8IUR0 188 aa12.85□□□□□ -0.35
SMC4-202ENST00000357388 CENPNQ96H22 339 aaPredicted RBP12.85□□□□□ -0.35
SMC4-202ENST00000357388 CRELD1Q96HD1 420 aa12.85□□□□□ -0.35
SMC4-202ENST00000357388 CELF6Q96J87 481 aaKnown RBP12.85□□□□□ -0.35
SMC4-202ENST00000357388 PANX1Q96RD7 426 aa12.85□□□□□ -0.35
SMC4-202ENST00000357388 NODALQ96S42 347 aa12.85□□□□□ -0.35
SMC4-202ENST00000357388 ZNF214Q9UL59 606 aaPredicted RBP12.85□□□□□ -0.35
SMC4-202ENST00000357388 TNFSF13BQ9Y275 285 aa12.85□□□□□ -0.35
SMC4-202ENST00000357388 TSPOAP1O95153 1857 aa12.85□□□□□ -0.35
SMC4-202ENST00000357388 GAKO14976 1311 aa12.85□□□□□ -0.35
SMC4-202ENST00000357388 ANGPTL1O95841 491 aa12.85□□□□□ -0.35
SMC4-202ENST00000357388 BPGMP07738 259 aa12.85□□□□□ -0.35
SMC4-202ENST00000357388 ITGA2BP08514 1039 aa12.85□□□□□ -0.35
SMC4-202ENST00000357388 COL6A2P12110 1019 aa12.85□□□□□ -0.35
SMC4-202ENST00000357388 SNRPD1P62314 119 aaKnown RBP12.85□□□□□ -0.35
SMC4-202ENST00000357388 NIPA1Q7RTP0 329 aa12.85□□□□□ -0.35
SMC4-202ENST00000357388 IQCF2Q8IXL9 164 aa12.85□□□□□ -0.35
SMC4-202ENST00000357388 ZBTB8BQ8NAP8 495 aaPredicted RBP12.85□□□□□ -0.35
SMC4-202ENST00000357388 EBNA1BP2Q99848 306 aaKnown RBP12.85□□□□□ -0.35
SMC4-202ENST00000357388 ADGRE2Q9UHX3 823 aa12.85□□□□□ -0.35
SMC4-202ENST00000357388 CAPN8A6NHC0 703 aa12.84□□□□□ -0.35
SMC4-202ENST00000357388 EPORP19235 508 aa12.84□□□□□ -0.35
SMC4-202ENST00000357388 TFEBP19484 476 aa12.84□□□□□ -0.35
SMC4-202ENST00000357388 ADIGQ0VDE8 80 aa12.84□□□□□ -0.35
SMC4-202ENST00000357388 BMT2Q1RMZ1 405 aa12.84□□□□□ -0.35
SMC4-202ENST00000357388 EIF5AL1Q6IS14 154 aaKnown RBP12.84□□□□□ -0.35
SMC4-202ENST00000357388 CLNKQ7Z7G1 428 aa12.84□□□□□ -0.35
SMC4-202ENST00000357388 KIAA0895Q8NCT3 520 aa12.84□□□□□ -0.35
SMC4-202ENST00000357388 IPCEF1Q8WWN9 437 aaPredicted RBP12.84□□□□□ -0.35
SMC4-202ENST00000357388 EDEM1Q92611 657 aa12.84□□□□□ -0.35
SMC4-202ENST00000357388 CLPTM1LQ96KA5 538 aa12.84□□□□□ -0.35
SMC4-202ENST00000357388 MND1Q9BWT6 205 aa12.84□□□□□ -0.35
SMC4-202ENST00000357388 NXF3Q9H4D5 531 aaKnown RBP12.84□□□□□ -0.35
SMC4-202ENST00000357388 ELL3Q9HB65 397 aaPredicted RBP12.84□□□□□ -0.35
SMC4-202ENST00000357388 SSU72Q9NP77 194 aaKnown RBP12.84□□□□□ -0.35
SMC4-202ENST00000357388 XPR1Q9UBH6 696 aa12.84□□□□□ -0.35
SMC4-202ENST00000357388 DNAJB4Q9UDY4 337 aa12.84□□□□□ -0.35
SMC4-202ENST00000357388 C1orf167Q5SNV9 1468 aa12.84□□□□□ -0.35
SMC4-202ENST00000357388 INO80Q9ULG1 1556 aaPredicted RBP12.84□□□□□ -0.35
SMC4-202ENST00000357388 FAM86B2P0C5J1 330 aa12.84□□□□□ -0.35
SMC4-202ENST00000357388 MTHFRP42898 656 aa12.84□□□□□ -0.35
SMC4-202ENST00000357388 OR2B6P58173 313 aa12.84□□□□□ -0.35
SMC4-202ENST00000357388 KLF10Q13118 480 aa12.84□□□□□ -0.35
SMC4-202ENST00000357388 MPP2Q14168 576 aa12.84□□□□□ -0.35
SMC4-202ENST00000357388 FAM46CQ5VWP2 391 aa12.84□□□□□ -0.35
SMC4-202ENST00000357388 CES3Q6UWW8 571 aa12.84□□□□□ -0.35
SMC4-202ENST00000357388 UNC5AQ6ZN44 842 aa12.84□□□□□ -0.35
SMC4-202ENST00000357388 TFAP2DQ7Z6R9 452 aa12.84□□□□□ -0.35
SMC4-202ENST00000357388 DQX1Q8TE96 717 aaKnown RBP12.84□□□□□ -0.35
SMC4-202ENST00000357388 AKAP1Q92667 903 aaKnown RBP eCLIP12.84□□□□□ -0.354e-24■■■■■ 140.6
SMC4-202ENST00000357388 SLC35C1Q96A29 364 aa12.84□□□□□ -0.35
SMC4-202ENST00000357388 YTHDF1Q9BYJ9 559 aaKnown RBP12.84□□□□□ -0.35
SMC4-202ENST00000357388 ANKHQ9HCJ1 492 aa12.84□□□□□ -0.35
SMC4-202ENST00000357388 ABCC13Q9NSE7 274 aa12.84□□□□□ -0.35
SMC4-202ENST00000357388 OAS3Q9Y6K5 1087 aaKnown RBP12.84□□□□□ -0.35
SMC4-202ENST00000357388 SIGLEC16A6NMB1 481 aa12.84□□□□□ -0.35
SMC4-202ENST00000357388 NTRK1P04629 796 aa12.84□□□□□ -0.35
SMC4-202ENST00000357388 CHKAP35790 457 aa12.84□□□□□ -0.35
SMC4-202ENST00000357388 ATP5C1P36542 298 aaKnown RBP12.84□□□□□ -0.35
SMC4-202ENST00000357388 ITPK1Q13572 414 aa12.84□□□□□ -0.35
SMC4-202ENST00000357388 TMEM119Q4V9L6 283 aa12.84□□□□□ -0.35
SMC4-202ENST00000357388 ANKRD26P1Q6NSI1 321 aa12.84□□□□□ -0.35
SMC4-202ENST00000357388 XKRXQ6PP77 449 aa12.84□□□□□ -0.35
SMC4-202ENST00000357388 ERI1Q8IV48 349 aaKnown RBP12.84□□□□□ -0.35
SMC4-202ENST00000357388 GALNT6Q8NCL4 622 aa12.84□□□□□ -0.35
SMC4-202ENST00000357388 MGME1Q9BQP7 344 aa12.84□□□□□ -0.35
SMC4-202ENST00000357388 RRAGCQ9HB90 399 aa12.84□□□□□ -0.35
SMC4-202ENST00000357388 N6AMT1Q9Y5N5 214 aa12.84□□□□□ -0.35
SMC4-202ENST00000357388 PNPLA6Q8IY17 1366 aa12.84□□□□□ -0.35
SMC4-202ENST00000357388 ACKR2O00590 384 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms