RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 BAP1Q92560 729 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 CXorf21Q9HAI6 301 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 GBA2Q9HCG7 927 aaPredicted RBP11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 C12orf4Q9NQ89 552 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 XPNPEP3Q9NQH7 507 aa11.51□□□□□ -0.57
SPTBN1-202ENST00000356805 H3BNH8 94 aa11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 GPIP06744 558 aa11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 KCNA5P22460 613 aa11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 IRF8Q02556 426 aa11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 MFSD10Q14728 455 aa11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 MAPKAPK3Q16644 382 aa11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 FAM91A1Q658Y4 838 aa11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 SPATA9Q9BWV2 254 aa11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 ELOVL4Q9GZR5 314 aa11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 MLXQ9UH92 298 aa11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 PRMT5O14744 637 aaPredicted RBP11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 MPZL2O60487 215 aa11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 DPEP1P16444 411 aa11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 SLC6A2P23975 617 aa11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 NKD1Q969G9 470 aa11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 ERAL1O75616 437 aaKnown RBP11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 IFNA7P01567 189 aa11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 CASP9P55211 416 aa11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 IL18R1Q13478 541 aa11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 DPYSL3Q14195 570 aa11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 SULT1C3Q6IMI6 304 aa11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 LINC00116Q8NCU8 138 aa11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 ATG10Q9H0Y0 220 aa11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 TTYH1Q9H313 450 aaPredicted RBP11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 BRD9Q9H8M2 597 aa11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 FBXO6Q9NRD1 293 aaPredicted RBP11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 STOX2Q9P2F5 926 aaPredicted RBP11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 A0A1W2PQ72 361 aa11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 LACTBL1A8MY62 500 aa11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 GJB6O95452 261 aa11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 ZBTB11O95625 1053 aaPredicted RBP11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 OR2L3Q8NG85 312 aa11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 TSPAN18Q96SJ8 248 aa11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 ARHGEF33A8MVX0 844 aa11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 TEX46H3BTG2 121 aa11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 TFECO14948 347 aaPredicted RBP11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 MATN4O95460 622 aa11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 PSMB4P28070 264 aa11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 RAB27AP51159 221 aa11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 ATXN1P54253 815 aaKnown RBP11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 CDH4P55283 916 aa11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 HKDC1Q2TB90 917 aa11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 OR10H5Q8NGA6 315 aa11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 PPP3R2Q96LZ3 170 aa11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 MARCH2Q9P0N8 246 aa11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 BTRCQ9Y297 605 aa11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 G3V2T6 193 aa11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 SLC22A1O15245 554 aa11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 GNRH1P01148 92 aa11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 ALAS2P22557 587 aa11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 SCIMPQ6UWF3 145 aa11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 SERPINA13PQ6UXR4 307 aa11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 PGAM4Q8N0Y7 254 aa11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 RNF31Q96EP0 1072 aa11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 ITCHQ96J02 903 aa11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 ZNF607Q96SK3 696 aa11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 TDRD1Q9BXT4 1180 aaKnown RBP11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 DNAAF2Q9NVR5 837 aaKnown RBP11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 TMEM9Q9P0T7 183 aa11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 DNMT3LQ9UJW3 386 aa11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 GNEQ9Y223 722 aaKnown RBP11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 DLC1Q96QB1 1528 aa11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 XKRYO14609 159 aa11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 ALOX15BO15296 676 aa11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 H6PDO95479 791 aa11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 RPLP2P05387 115 aaKnown RBP11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 HTR1BP28222 390 aa11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 MNDAP41218 407 aa11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 MC1RQ01726 317 aa11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 ALLCQ8N6M5 410 aa11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 KIAA0895Q8NCT3 520 aa11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 STAG3L4Q8TBR4 150 aa11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 ERMAPQ96PL5 475 aaPredicted RBP11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 MED28Q9H204 178 aa11.5□□□□□ -0.57
SPTBN1-202ENST00000356805 RGS10O43665 173 aa11.49□□□□□ -0.57
SPTBN1-202ENST00000356805 SHBGP04278 402 aa11.49□□□□□ -0.57
SPTBN1-202ENST00000356805 LINC00032P0C843 101 aa11.49□□□□□ -0.57
SPTBN1-202ENST00000356805 ACAP2Q15057 778 aa11.49□□□□□ -0.57
SPTBN1-202ENST00000356805 STYK1Q6J9G0 422 aa11.49□□□□□ -0.57
SPTBN1-202ENST00000356805 KCNT2Q6UVM3 1135 aa11.49□□□□□ -0.57
SPTBN1-202ENST00000356805 ATP13A3Q9H7F0 1226 aa11.49□□□□□ -0.57
SPTBN1-202ENST00000356805 FETUBQ9UGM5 382 aa11.49□□□□□ -0.57
SPTBN1-202ENST00000356805 BUD23O43709 281 aaKnown RBP11.49□□□□□ -0.57
SPTBN1-202ENST00000356805 TULP3O75386 442 aa11.49□□□□□ -0.57
SPTBN1-202ENST00000356805 MANFP55145 182 aaKnown RBP11.49□□□□□ -0.57
SPTBN1-202ENST00000356805 RPL38P63173 70 aaKnown RBP11.49□□□□□ -0.57
SPTBN1-202ENST00000356805 MADCAM1Q13477 382 aa11.49□□□□□ -0.57
SPTBN1-202ENST00000356805 EIF2S3LQ2VIR3 472 aaKnown RBP11.49□□□□□ -0.57
SPTBN1-202ENST00000356805 SLC9A4Q6AI14 798 aa11.49□□□□□ -0.57
SPTBN1-202ENST00000356805 FAM131AQ6UXB0 335 aa11.49□□□□□ -0.57
SPTBN1-202ENST00000356805 SH3RF1Q7Z6J0 888 aa11.49□□□□□ -0.57
SPTBN1-202ENST00000356805 UBE2Q1Q7Z7E8 422 aa11.49□□□□□ -0.57
SPTBN1-202ENST00000356805 C2orf73Q8N5S3 287 aaPredicted RBP11.49□□□□□ -0.57
SPTBN1-202ENST00000356805 DNPEPQ9ULA0 475 aa11.49□□□□□ -0.57
SPTBN1-202ENST00000356805 SALL1Q9NSC2 1324 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms