RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 C16orf46Q6P387 395 aa6.47□□□□□ -1.37
UPF2-201ENST00000356352 PTF1AQ7RTS3 328 aa6.47□□□□□ -1.37
UPF2-201ENST00000356352 GALNT7Q86SF2 657 aa6.47□□□□□ -1.37
UPF2-201ENST00000356352 VSIG10LQ86VR7 867 aa6.47□□□□□ -1.37
UPF2-201ENST00000356352 CDYL2Q8N8U2 506 aa6.47□□□□□ -1.37
UPF2-201ENST00000356352 GPR156Q8NFN8 814 aa6.47□□□□□ -1.37
UPF2-201ENST00000356352 ADAMTS15Q8TE58 950 aa6.47□□□□□ -1.37
UPF2-201ENST00000356352 IRGQQ8WZA9 623 aa6.47□□□□□ -1.37
UPF2-201ENST00000356352 ACE2Q9BYF1 805 aaPredicted RBP6.47□□□□□ -1.37
UPF2-201ENST00000356352 ABCG4Q9H172 646 aa6.47□□□□□ -1.37
UPF2-201ENST00000356352 ZFP14Q9HCL3 533 aa6.47□□□□□ -1.37
UPF2-201ENST00000356352 ADAMTS13Q76LX8 1427 aa6.46□□□□□ -1.37
UPF2-201ENST00000356352 ERAL1O75616 437 aaKnown RBP6.46□□□□□ -1.37
UPF2-201ENST00000356352 WFS1O76024 890 aa6.46□□□□□ -1.37
UPF2-201ENST00000356352 IFNA6P05013 189 aa6.46□□□□□ -1.37
UPF2-201ENST00000356352 FGFR3P22607 806 aa6.46□□□□□ -1.37
UPF2-201ENST00000356352 SDC2P34741 201 aa6.46□□□□□ -1.37
UPF2-201ENST00000356352 SSR2P43308 183 aa6.46□□□□□ -1.37
UPF2-201ENST00000356352 RPL5P46777 297 aaKnown RBP6.46□□□□□ -1.37
UPF2-201ENST00000356352 AP3S2P59780 193 aa6.46□□□□□ -1.37
UPF2-201ENST00000356352 C15orf59Q2T9L4 293 aaPredicted RBP6.46□□□□□ -1.37
UPF2-201ENST00000356352 TMEM63BQ5T3F8 832 aa6.46□□□□□ -1.37
UPF2-201ENST00000356352 NPNTQ6UXI9 565 aa6.46□□□□□ -1.37
UPF2-201ENST00000356352 KCTD4Q8WVF5 259 aa6.46□□□□□ -1.37
UPF2-201ENST00000356352 DGCR14Q96DF8 476 aaKnown RBP6.46□□□□□ -1.37
UPF2-201ENST00000356352 ZBTB45Q96K62 511 aaPredicted RBP6.46□□□□□ -1.37
UPF2-201ENST00000356352 CHID1Q9BWS9 393 aa6.46□□□□□ -1.37
UPF2-201ENST00000356352 CLK4Q9HAZ1 481 aaKnown RBP6.46□□□□□ -1.37
UPF2-201ENST00000356352 SGK2Q9HBY8 427 aa6.46□□□□□ -1.37
UPF2-201ENST00000356352 BPIFA1Q9NP55 256 aa6.46□□□□□ -1.37
UPF2-201ENST00000356352 NUDT4Q9NZJ9 180 aa6.46□□□□□ -1.37
UPF2-201ENST00000356352 GULP1Q9UBP9 304 aa6.46□□□□□ -1.37
UPF2-201ENST00000356352 CORO1CQ9ULV4 474 aaPredicted RBP6.46□□□□□ -1.37
UPF2-201ENST00000356352 ADM5C9JUS6 153 aa6.46□□□□□ -1.38
UPF2-201ENST00000356352 AREL1O15033 823 aa6.46□□□□□ -1.38
UPF2-201ENST00000356352 KMOO15229 486 aa6.46□□□□□ -1.38
UPF2-201ENST00000356352 DDNO94850 711 aaPredicted RBP6.46□□□□□ -1.38
UPF2-201ENST00000356352 IDSP22304 550 aa6.46□□□□□ -1.38
UPF2-201ENST00000356352 NDUFV1P49821 464 aa6.46□□□□□ -1.38
UPF2-201ENST00000356352 SP3Q02447 781 aa6.46□□□□□ -1.38
UPF2-201ENST00000356352 SUZ12Q15022 739 aaKnown RBP6.46□□□□□ -1.38
UPF2-201ENST00000356352 DACT2Q5SW24 774 aa6.46□□□□□ -1.38
UPF2-201ENST00000356352 C15orf52Q6ZUT6 534 aaKnown RBP6.46□□□□□ -1.38
UPF2-201ENST00000356352 ADGRA1Q86SQ6 560 aa6.46□□□□□ -1.38
UPF2-201ENST00000356352 OR10G6Q8NH81 332 aa6.46□□□□□ -1.38
UPF2-201ENST00000356352 DNAJB14Q8TBM8 379 aa6.46□□□□□ -1.38
UPF2-201ENST00000356352 ACOT12Q8WYK0 555 aa6.46□□□□□ -1.38
UPF2-201ENST00000356352 BAP1Q92560 729 aa6.46□□□□□ -1.38
UPF2-201ENST00000356352 ACSS3Q9H6R3 686 aa6.46□□□□□ -1.38
UPF2-201ENST00000356352 KCND1Q9NSA2 647 aa6.46□□□□□ -1.38
UPF2-201ENST00000356352 BLOC1S4Q9NUP1 217 aa6.46□□□□□ -1.38
UPF2-201ENST00000356352 DNAJC11Q9NVH1 559 aa6.46□□□□□ -1.38
UPF2-201ENST00000356352 FKBP14Q9NWM8 211 aa6.46□□□□□ -1.38
UPF2-201ENST00000356352 MRPS7Q9Y2R9 242 aaKnown RBP6.46□□□□□ -1.38
UPF2-201ENST00000356352 SETD1BQ9UPS6 1966 aaKnown RBP6.46□□□□□ -1.38
UPF2-201ENST00000356352 DHFRP00374 187 aa6.46□□□□□ -1.38
UPF2-201ENST00000356352 NUDT17P0C025 328 aa6.46□□□□□ -1.38
UPF2-201ENST00000356352 ANPEPP15144 967 aa6.46□□□□□ -1.38
UPF2-201ENST00000356352 CMPK1P30085 196 aa6.46□□□□□ -1.38
UPF2-201ENST00000356352 GLUD2P49448 558 aa6.46□□□□□ -1.38
UPF2-201ENST00000356352 SMAD3P84022 425 aaKnown RBP6.46□□□□□ -1.38
UPF2-201ENST00000356352 RPL19P84098 196 aaKnown RBP6.46□□□□□ -1.38
UPF2-201ENST00000356352 CACNG1Q06432 222 aa6.46□□□□□ -1.38
UPF2-201ENST00000356352 VGLL4Q14135 290 aa6.46□□□□□ -1.38
UPF2-201ENST00000356352 SWI5Q1ZZU3 235 aa6.46□□□□□ -1.38
UPF2-201ENST00000356352 CNSTQ6PJW8 725 aa6.46□□□□□ -1.38
UPF2-201ENST00000356352 VSTM1Q6UX27 236 aa6.46□□□□□ -1.38
UPF2-201ENST00000356352 STRADAQ7RTN6 431 aa6.46□□□□□ -1.38
UPF2-201ENST00000356352 DNAJB7Q7Z6W7 309 aaPredicted RBP6.46□□□□□ -1.38
UPF2-201ENST00000356352 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.46□□□□□ -1.38
UPF2-201ENST00000356352 DAW1Q8N136 415 aa6.46□□□□□ -1.38
UPF2-201ENST00000356352 ZBTB2Q8N680 514 aa6.46□□□□□ -1.38
UPF2-201ENST00000356352 POC5Q8NA72 575 aa6.46□□□□□ -1.38
UPF2-201ENST00000356352 BTN2A3PQ96KV6 586 aa6.46□□□□□ -1.38
UPF2-201ENST00000356352 C5orf34Q96MH7 638 aa6.46□□□□□ -1.38
UPF2-201ENST00000356352 PLEKHG4BQ96PX9 1271 aa6.46□□□□□ -1.38
UPF2-201ENST00000356352 RHOBTB2Q9BYZ6 727 aa6.46□□□□□ -1.38
UPF2-201ENST00000356352 GLIS2Q9BZE0 524 aaPredicted RBP6.46□□□□□ -1.38
UPF2-201ENST00000356352 CDT1Q9H211 546 aa6.46□□□□□ -1.38
UPF2-201ENST00000356352 LHX5Q9H2C1 402 aa6.46□□□□□ -1.38
UPF2-201ENST00000356352 NXF3Q9H4D5 531 aaKnown RBP6.46□□□□□ -1.38
UPF2-201ENST00000356352 SNX15Q9NRS6 342 aa6.46□□□□□ -1.38
UPF2-201ENST00000356352 ERVW-1Q9UQF0 538 aa6.46□□□□□ -1.38
UPF2-201ENST00000356352 POLR3HQ9Y535 204 aaPredicted RBP6.46□□□□□ -1.38
UPF2-201ENST00000356352 GLYATL1P3A0A0U1RQE8 302 aa6.46□□□□□ -1.38
UPF2-201ENST00000356352 FAM237BA0A1B0GVD1 139 aa6.46□□□□□ -1.38
UPF2-201ENST00000356352 ZNF879B4DU55 563 aa6.46□□□□□ -1.38
UPF2-201ENST00000356352 H0Y858 1186 aa6.46□□□□□ -1.38
UPF2-201ENST00000356352 DHX15O43143 795 aaKnown RBP6.46□□□□□ -1.38
UPF2-201ENST00000356352 TRBC1P01850 177 aa6.46□□□□□ -1.38
UPF2-201ENST00000356352 PRNPP04156 253 aa6.46□□□□□ -1.38
UPF2-201ENST00000356352 PTX3P26022 381 aaPredicted RBP6.46□□□□□ -1.38
UPF2-201ENST00000356352 CNTN2Q02246 1040 aa6.46□□□□□ -1.38
UPF2-201ENST00000356352 ZMYND11Q15326 602 aa6.46□□□□□ -1.38
UPF2-201ENST00000356352 TEAD4Q15561 434 aa6.46□□□□□ -1.38
UPF2-201ENST00000356352 GCNT6Q5T4J0 391 aa6.46□□□□□ -1.38
UPF2-201ENST00000356352 MAP1SQ66K74 1059 aaPredicted RBP6.46□□□□□ -1.38
UPF2-201ENST00000356352 SNX20Q7Z614 316 aa6.46□□□□□ -1.38
UPF2-201ENST00000356352 FAM35AQ86V20 835 aa6.46□□□□□ -1.38
UPF2-201ENST00000356352 CREG2Q8IUH2 290 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms