RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 GNPDA1P46926 289 aa10.65□□□□□ -0.7
CAPN3-204ENST00000356316 EPHB1P54762 984 aa10.65□□□□□ -0.7
CAPN3-204ENST00000356316 MAXP61244 160 aa10.65□□□□□ -0.7
CAPN3-204ENST00000356316 SKOR1P84550 965 aa10.65□□□□□ -0.7
CAPN3-204ENST00000356316 ZBED6P86452 979 aa10.65□□□□□ -0.7
CAPN3-204ENST00000356316 FANCCQ00597 558 aa10.65□□□□□ -0.7
CAPN3-204ENST00000356316 HLTFQ14527 1009 aaKnown RBP eCLIP10.65□□□□□ -0.7
CAPN3-204ENST00000356316 IQCB1Q15051 598 aa10.65□□□□□ -0.7
CAPN3-204ENST00000356316 MAP9Q49MG5 647 aa10.65□□□□□ -0.7
CAPN3-204ENST00000356316 ZFYVE27Q5T4F4 411 aa10.65□□□□□ -0.7
CAPN3-204ENST00000356316 PHF19Q5T6S3 580 aa10.65□□□□□ -0.7
CAPN3-204ENST00000356316 TMEM164Q5U3C3 297 aa10.65□□□□□ -0.7
CAPN3-204ENST00000356316 E4F1Q66K89 784 aaPredicted RBP10.65□□□□□ -0.7
CAPN3-204ENST00000356316 RAET1GQ6H3X3 334 aa10.65□□□□□ -0.7
CAPN3-204ENST00000356316 TIGD7Q6NT04 549 aaPredicted RBP10.65□□□□□ -0.7
CAPN3-204ENST00000356316 Q6ZVL8 140 aa10.65□□□□□ -0.7
CAPN3-204ENST00000356316 SPRED1Q7Z699 444 aa10.65□□□□□ -0.7
CAPN3-204ENST00000356316 HEATR4Q86WZ0 1026 aa10.65□□□□□ -0.7
CAPN3-204ENST00000356316 MAP7D3Q8IWC1 876 aa10.65□□□□□ -0.7
CAPN3-204ENST00000356316 PGBD5Q8N414 524 aa10.65□□□□□ -0.7
CAPN3-204ENST00000356316 ZNF843Q8N446 348 aa10.65□□□□□ -0.7
CAPN3-204ENST00000356316 NIPA2Q8N8Q9 360 aa10.65□□□□□ -0.7
CAPN3-204ENST00000356316 KCTD6Q8NC69 237 aa10.65□□□□□ -0.7
CAPN3-204ENST00000356316 ZDHHC1Q8WTX9 485 aa10.65□□□□□ -0.7
CAPN3-204ENST00000356316 MARVELD3Q96A59 401 aa10.65□□□□□ -0.7
CAPN3-204ENST00000356316 DTD2Q96FN9 168 aa10.65□□□□□ -0.7
CAPN3-204ENST00000356316 BTBD6Q96KE9 485 aa10.65□□□□□ -0.7
CAPN3-204ENST00000356316 CCNL2Q96S94 520 aaPredicted RBP10.65□□□□□ -0.7
CAPN3-204ENST00000356316 SEMA3CQ99985 751 aa10.65□□□□□ -0.7
CAPN3-204ENST00000356316 MGME1Q9BQP7 344 aa10.65□□□□□ -0.7
CAPN3-204ENST00000356316 POLR1EQ9GZS1 481 aaKnown RBP10.65□□□□□ -0.7
CAPN3-204ENST00000356316 NT5MQ9NPB1 228 aa10.65□□□□□ -0.7
CAPN3-204ENST00000356316 TRNAU1APQ9NX07 287 aaKnown RBP10.65□□□□□ -0.7
CAPN3-204ENST00000356316 RCOR3Q9P2K3 495 aaPredicted RBP10.65□□□□□ -0.7
CAPN3-204ENST00000356316 PISDQ9UG56 409 aa10.65□□□□□ -0.7
CAPN3-204ENST00000356316 ATXN7L1Q9ULK2 861 aaPredicted RBP10.65□□□□□ -0.7
CAPN3-204ENST00000356316 CAPN11Q9UMQ6 739 aa10.65□□□□□ -0.7
CAPN3-204ENST00000356316 LUC7L2Q9Y383 392 aaKnown RBP10.65□□□□□ -0.7
CAPN3-204ENST00000356316 COL27A1Q8IZC6 1860 aaPredicted RBP10.65□□□□□ -0.7
CAPN3-204ENST00000356316 KIF26BQ2KJY2 2108 aa10.64□□□□□ -0.71
CAPN3-204ENST00000356316 PMS2P1A4D2B8 440 aa10.64□□□□□ -0.71
CAPN3-204ENST00000356316 K7ENP7 123 aa10.64□□□□□ -0.71
CAPN3-204ENST00000356316 AGRPO00253 132 aa10.64□□□□□ -0.71
CAPN3-204ENST00000356316 NVLO15381 856 aaKnown RBP10.64□□□□□ -0.71
CAPN3-204ENST00000356316 NOBOXO60393 691 aa10.64□□□□□ -0.71
CAPN3-204ENST00000356316 PGLSO95336 258 aa10.64□□□□□ -0.71
CAPN3-204ENST00000356316 CPNE6O95741 557 aa10.64□□□□□ -0.71
CAPN3-204ENST00000356316 PEX11BO96011 259 aa10.64□□□□□ -0.71
CAPN3-204ENST00000356316 CYP1A2P05177 515 aa10.64□□□□□ -0.71
CAPN3-204ENST00000356316 CEACAM5P06731 702 aa10.64□□□□□ -0.71
CAPN3-204ENST00000356316 PYGLP06737 847 aa10.64□□□□□ -0.71
CAPN3-204ENST00000356316 TCF4P15884 667 aa10.64□□□□□ -0.71
CAPN3-204ENST00000356316 GM2AP17900 193 aa10.64□□□□□ -0.71
CAPN3-204ENST00000356316 CA4P22748 312 aa10.64□□□□□ -0.71
CAPN3-204ENST00000356316 PPM1FP49593 454 aaPredicted RBP10.64□□□□□ -0.71
CAPN3-204ENST00000356316 PDX1P52945 283 aa10.64□□□□□ -0.71
CAPN3-204ENST00000356316 CDK3Q00526 305 aa10.64□□□□□ -0.71
CAPN3-204ENST00000356316 TRAF2Q12933 501 aa10.64□□□□□ -0.71
CAPN3-204ENST00000356316 CLN3Q13286 438 aa10.64□□□□□ -0.71
CAPN3-204ENST00000356316 AMZ1Q400G9 498 aa10.64□□□□□ -0.71
CAPN3-204ENST00000356316 HGSNATQ68CP4 663 aa10.64□□□□□ -0.71
CAPN3-204ENST00000356316 KCTD16Q68DU8 428 aa10.64□□□□□ -0.71
CAPN3-204ENST00000356316 ALKBH5Q6P6C2 394 aaKnown RBP10.64□□□□□ -0.71
CAPN3-204ENST00000356316 INO80CQ6PI98 192 aaPredicted RBP10.64□□□□□ -0.71
CAPN3-204ENST00000356316 SLC30A9Q6PML9 568 aa10.64□□□□□ -0.71
CAPN3-204ENST00000356316 USP53Q70EK8 1073 aa10.64□□□□□ -0.71
CAPN3-204ENST00000356316 HSD11B1LQ7Z5J1 315 aa10.64□□□□□ -0.71
CAPN3-204ENST00000356316 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.64□□□□□ -0.71
CAPN3-204ENST00000356316 CCL4L1Q8NHW4 92 aa10.64□□□□□ -0.71
CAPN3-204ENST00000356316 GPBAR1Q8TDU6 330 aa10.64□□□□□ -0.71
CAPN3-204ENST00000356316 SNRNP27Q8WVK2 155 aaKnown RBP10.64□□□□□ -0.71
CAPN3-204ENST00000356316 AP2M1Q96CW1 435 aa10.64□□□□□ -0.71
CAPN3-204ENST00000356316 NSMCE3Q96MG7 304 aa10.64□□□□□ -0.71
CAPN3-204ENST00000356316 SPATS2LQ9NUQ6 558 aaKnown RBP10.64□□□□□ -0.71
CAPN3-204ENST00000356316 SUFUQ9UMX1 484 aa10.64□□□□□ -0.71
CAPN3-204ENST00000356316 LOXL2Q9Y4K0 774 aa10.64□□□□□ -0.71
CAPN3-204ENST00000356316 TTLL3Q9Y4R7 772 aa10.64□□□□□ -0.71
CAPN3-204ENST00000356316 A0A087X0T9 212 aa10.63□□□□□ -0.71
CAPN3-204ENST00000356316 SYCE3A1L190 88 aa10.63□□□□□ -0.71
CAPN3-204ENST00000356316 NPIPB15A6NHN6 443 aaPredicted RBP10.63□□□□□ -0.71
CAPN3-204ENST00000356316 C1QL1O75973 258 aa10.63□□□□□ -0.71
CAPN3-204ENST00000356316 ECEL1O95672 775 aa10.63□□□□□ -0.71
CAPN3-204ENST00000356316 FGF1P05230 155 aa10.63□□□□□ -0.71
CAPN3-204ENST00000356316 TPM3P06753 285 aa10.63□□□□□ -0.71
CAPN3-204ENST00000356316 FAM228BP0C875 321 aa10.63□□□□□ -0.71
CAPN3-204ENST00000356316 HGFP14210 728 aa10.63□□□□□ -0.71
CAPN3-204ENST00000356316 CCNCP24863 283 aa10.63□□□□□ -0.71
CAPN3-204ENST00000356316 TEAD1P28347 426 aa10.63□□□□□ -0.71
CAPN3-204ENST00000356316 GPR3P46089 330 aa10.63□□□□□ -0.71
CAPN3-204ENST00000356316 POLD2P49005 469 aa10.63□□□□□ -0.71
CAPN3-204ENST00000356316 MAPK10P53779 464 aa10.63□□□□□ -0.71
CAPN3-204ENST00000356316 OR1D5P58170 312 aa10.63□□□□□ -0.71
CAPN3-204ENST00000356316 ZFP36L1Q07352 338 aaKnown RBP10.63□□□□□ -0.71
CAPN3-204ENST00000356316 DPTQ07507 201 aa10.63□□□□□ -0.71
CAPN3-204ENST00000356316 MMRN1Q13201 1228 aa10.63□□□□□ -0.71
CAPN3-204ENST00000356316 PDK2Q15119 407 aa10.63□□□□□ -0.71
CAPN3-204ENST00000356316 IFI16Q16666 785 aaKnown RBP10.63□□□□□ -0.71
CAPN3-204ENST00000356316 CLPPQ16740 277 aaPredicted RBP10.63□□□□□ -0.71
CAPN3-204ENST00000356316 TXNRD3NBQ6F5E7 133 aa10.63□□□□□ -0.71
CAPN3-204ENST00000356316 DOK6Q6PKX4 331 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms