RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 SLC6A3Q01959 620 aa11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 SIM2Q14190 667 aaPredicted RBP11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 PPP1R15BQ5SWA1 713 aa11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 IDNKQ5T6J7 187 aa11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 FRRS1Q6ZNA5 592 aa11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 ZFP28Q8NHY6 868 aa11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 SMARCD1Q96GM5 515 aa11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 PNMA5Q96PV4 448 aa11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 SLC17A7Q9P2U7 560 aa11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 IKZF2Q9UKS7 526 aa11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 SCN2BO60939 215 aa11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 AVILO75366 819 aa11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 ICAM1P05362 532 aa11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 GRK5P34947 590 aa11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 MBTD1Q05BQ5 628 aa11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 PEX6Q13608 980 aa11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 NOL9Q5SY16 702 aaKnown RBP11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 REP15Q6BDI9 236 aa11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 ATCAYQ86WG3 371 aa11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 FAIM2Q9BWQ8 316 aa11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 MOV10Q9HCE1 1003 aaKnown RBP11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 ADAM28Q9UKQ2 775 aa11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 ZNF780BQ9Y6R6 833 aa11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 EDF1O60869 148 aaKnown RBP11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 SMU1Q2TAY7 513 aa11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 OGFRL1Q5TC84 451 aaPredicted RBP11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 TPGS1Q6ZTW0 290 aa11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 TRIM43Q96BQ3 446 aaPredicted RBP11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 MRPL57Q9BQC6 102 aaKnown RBP11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 EQTNQ9NQ60 294 aa11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 PXMP2Q9NR77 195 aa11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 EMC3Q9P0I2 261 aa11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 CDH22Q9UJ99 828 aa11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 LRRIQ1Q96JM4 1722 aa11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 E5RJQ4 531 aa11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 CPNE3O75131 537 aaKnown RBP11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 SLC25A27O95847 323 aa11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 URODP06132 367 aa11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 HNRNPH3P31942 346 aaKnown RBP11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 ACVR2BQ13705 512 aa11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 SNAPC1Q16533 368 aa11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 CNPY1Q3B7I2 92 aa11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 HMBOX1Q6NT76 420 aa11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 ZDHHC17Q8IUH5 632 aa11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 STK40Q8N2I9 435 aa11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 FERD3LQ96RJ6 166 aa11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 GAL3ST1Q99999 423 aa11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 IRF2BPLQ9H1B7 796 aa11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 ASB8Q9H765 288 aa11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 GSC2O15499 205 aa11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 SLC22A3O75751 556 aa11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 MT-ND1P03886 318 aa11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 FUT4P22083 530 aa11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 CD83Q01151 205 aa11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 LIPEQ05469 1076 aa11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 MPPE1Q53F39 396 aa11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 ANGEL2Q5VTE6 544 aaKnown RBP11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 ZNF248Q8NDW4 579 aa11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 ZNF563Q8TA94 476 aa11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 VAT1Q99536 393 aa11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 RBM4BQ9BQ04 359 aaKnown RBP11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 RBM4Q9BWF3 364 aaKnown RBP11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 POLR1EQ9GZS1 481 aaKnown RBP11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 TREM1Q9NP99 234 aa11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 DNAJC11Q9NVH1 559 aa11.03□□□□□ -0.64
GTF3C1-201ENST00000356183 GIMD1P0DJR0 217 aa11.02□□□□□ -0.64
GTF3C1-201ENST00000356183 GLRA2P23416 452 aa11.02□□□□□ -0.64
GTF3C1-201ENST00000356183 HSD3B2P26439 372 aa11.02□□□□□ -0.64
GTF3C1-201ENST00000356183 ATXN1P54253 815 aaKnown RBP11.02□□□□□ -0.64
GTF3C1-201ENST00000356183 SCN1BQ07699 218 aa11.02□□□□□ -0.64
GTF3C1-201ENST00000356183 CRY2Q49AN0 593 aa11.02□□□□□ -0.64
GTF3C1-201ENST00000356183 NEPROQ6NW34 567 aa11.02□□□□□ -0.64
GTF3C1-201ENST00000356183 CAMSAP1Q5T5Y3 1602 aa11.02□□□□□ -0.64
GTF3C1-201ENST00000356183 LACTBL1A8MY62 500 aa11.02□□□□□ -0.64
GTF3C1-201ENST00000356183 APOC4-APOC2K7ER74 178 aa11.02□□□□□ -0.64
GTF3C1-201ENST00000356183 SMAD9O15198 467 aaKnown RBP11.02□□□□□ -0.64
GTF3C1-201ENST00000356183 APOC2P02655 101 aa11.02□□□□□ -0.64
GTF3C1-201ENST00000356183 IDO1P14902 403 aa11.02□□□□□ -0.64
GTF3C1-201ENST00000356183 GABRB2P47870 512 aa11.02□□□□□ -0.64
GTF3C1-201ENST00000356183 SLC5A3P53794 718 aa11.02□□□□□ -0.64
GTF3C1-201ENST00000356183 SLC12A3P55017 1021 aa11.02□□□□□ -0.64
GTF3C1-201ENST00000356183 RTP1P59025 263 aa11.02□□□□□ -0.64
GTF3C1-201ENST00000356183 PDPRQ8NCN5 879 aa11.02□□□□□ -0.64
GTF3C1-201ENST00000356183 SLC2A14Q8TDB8 520 aa11.02□□□□□ -0.64
GTF3C1-201ENST00000356183 LRTOMTQ8WZ04 291 aa11.02□□□□□ -0.64
GTF3C1-201ENST00000356183 SNX15Q9NRS6 342 aa11.02□□□□□ -0.64
GTF3C1-201ENST00000356183 ZNF69Q9UC07 566 aa11.02□□□□□ -0.64
GTF3C1-201ENST00000356183 TRIM17Q9Y577 477 aa11.02□□□□□ -0.64
GTF3C1-201ENST00000356183 MAU2Q9Y6X3 613 aa11.02□□□□□ -0.64
GTF3C1-201ENST00000356183 MYO3AQ8NEV4 1616 aa11.02□□□□□ -0.65
GTF3C1-201ENST00000356183 OR6C70A6NIJ9 312 aa11.02□□□□□ -0.65
GTF3C1-201ENST00000356183 MPSTP25325 297 aa11.02□□□□□ -0.65
GTF3C1-201ENST00000356183 PRKCIP41743 596 aa11.02□□□□□ -0.65
GTF3C1-201ENST00000356183 DNASE1L1P49184 302 aa11.02□□□□□ -0.65
GTF3C1-201ENST00000356183 HECTD3Q5T447 861 aa11.02□□□□□ -0.65
GTF3C1-201ENST00000356183 GHDCQ8N2G8 530 aa11.02□□□□□ -0.65
GTF3C1-201ENST00000356183 OR52J3Q8NH60 311 aa11.02□□□□□ -0.65
GTF3C1-201ENST00000356183 CD101Q93033 1021 aa11.02□□□□□ -0.65
GTF3C1-201ENST00000356183 KLHL5Q96PQ7 755 aa11.02□□□□□ -0.65
GTF3C1-201ENST00000356183 TEFMQ96QE5 360 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms