RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 CACNG1Q06432 222 aa17.19■□□□□ 0.34
VPS13B-201ENST00000355155 GALNT1Q10472 559 aaPredicted RBP17.19■□□□□ 0.34
VPS13B-201ENST00000355155 SMAD1Q15797 465 aaKnown RBP17.19■□□□□ 0.34
VPS13B-201ENST00000355155 GPR149Q86SP6 731 aa17.19■□□□□ 0.34
VPS13B-201ENST00000355155 RNF135Q8IUD6 432 aa17.19■□□□□ 0.34
VPS13B-201ENST00000355155 STK40Q8N2I9 435 aa17.19■□□□□ 0.34
VPS13B-201ENST00000355155 RHEBL1Q8TAI7 183 aa17.19■□□□□ 0.34
VPS13B-201ENST00000355155 NXNL1Q96CM4 212 aa17.19■□□□□ 0.34
VPS13B-201ENST00000355155 ASB16Q96NS5 453 aa17.19■□□□□ 0.34
VPS13B-201ENST00000355155 LRRC3BQ96PB8 259 aa17.19■□□□□ 0.34
VPS13B-201ENST00000355155 P2RY12Q9H244 342 aa17.19■□□□□ 0.34
VPS13B-201ENST00000355155 SUDS3Q9H7L9 328 aaPredicted RBP17.19■□□□□ 0.34
VPS13B-201ENST00000355155 PLK2Q9NYY3 685 aa17.19■□□□□ 0.34
VPS13B-201ENST00000355155 PCDHB9Q9Y5E1 797 aa17.19■□□□□ 0.34
VPS13B-201ENST00000355155 NEDD8-MDP1E9PL57 170 aa17.19■□□□□ 0.34
VPS13B-201ENST00000355155 PFDN6O15212 129 aa17.19■□□□□ 0.34
VPS13B-201ENST00000355155 CYP17A1P05093 508 aa17.19■□□□□ 0.34
VPS13B-201ENST00000355155 ARFIP2P53365 341 aa17.19■□□□□ 0.34
VPS13B-201ENST00000355155 PTPRCAPQ14761 206 aa17.19■□□□□ 0.34
VPS13B-201ENST00000355155 DHCR24Q15392 516 aa17.19■□□□□ 0.34
VPS13B-201ENST00000355155 GAB4Q2WGN9 574 aa17.19■□□□□ 0.34
VPS13B-201ENST00000355155 SETMARQ53H47 684 aaPredicted RBP17.19■□□□□ 0.34
VPS13B-201ENST00000355155 TMEM207Q6UWW9 146 aa17.19■□□□□ 0.34
VPS13B-201ENST00000355155 ATG14Q6ZNE5 492 aa17.19■□□□□ 0.34
VPS13B-201ENST00000355155 TBC1D1Q86TI0 1168 aaPredicted RBP17.19■□□□□ 0.34
VPS13B-201ENST00000355155 GPATCH11Q8N954 259 aa17.19■□□□□ 0.34
VPS13B-201ENST00000355155 PIWIL2Q8TC59 973 aaKnown RBP17.19■□□□□ 0.34
VPS13B-201ENST00000355155 HEXDCQ8WVB3 486 aa17.19■□□□□ 0.34
VPS13B-201ENST00000355155 RSPRY1Q96DX4 576 aa17.19■□□□□ 0.34
VPS13B-201ENST00000355155 LRIG1Q96JA1 1093 aa17.19■□□□□ 0.34
VPS13B-201ENST00000355155 GDF15Q99988 308 aa17.19■□□□□ 0.34
VPS13B-201ENST00000355155 NFKBIL1Q9UBC1 381 aaPredicted RBP17.19■□□□□ 0.34
VPS13B-201ENST00000355155 ERVW-1Q9UQF0 538 aa17.19■□□□□ 0.34
VPS13B-201ENST00000355155 PLXNB3Q9ULL4 1909 aa17.19■□□□□ 0.34
VPS13B-201ENST00000355155 STX7O15400 261 aaKnown RBP17.18■□□□□ 0.34
VPS13B-201ENST00000355155 UBOX5O94941 541 aa17.18■□□□□ 0.34
VPS13B-201ENST00000355155 KCNA4P22459 653 aa17.18■□□□□ 0.34
VPS13B-201ENST00000355155 ARRB2P32121 409 aa17.18■□□□□ 0.34
VPS13B-201ENST00000355155 CTC1Q2NKJ3 1217 aa17.18■□□□□ 0.34
VPS13B-201ENST00000355155 CAMK1DQ8IU85 385 aa17.18■□□□□ 0.34
VPS13B-201ENST00000355155 NPAS3Q8IXF0 933 aa17.18■□□□□ 0.34
VPS13B-201ENST00000355155 BIRC8Q96P09 236 aa17.18■□□□□ 0.34
VPS13B-201ENST00000355155 TMEM120AQ9BXJ8 343 aa17.18■□□□□ 0.34
VPS13B-201ENST00000355155 SUV39H2Q9H5I1 410 aa17.18■□□□□ 0.34
VPS13B-201ENST00000355155 PLXNA2O75051 1894 aa17.18■□□□□ 0.34
VPS13B-201ENST00000355155 ITM2AO43736 263 aa17.18■□□□□ 0.34
VPS13B-201ENST00000355155 HNRNPCL1O60812 293 aaKnown RBP17.18■□□□□ 0.34
VPS13B-201ENST00000355155 PIRTP0C851 137 aa17.18■□□□□ 0.34
VPS13B-201ENST00000355155 NEFHP12036 1026 aa17.18■□□□□ 0.34
VPS13B-201ENST00000355155 ATP5F1P24539 256 aaPredicted RBP17.18■□□□□ 0.34
VPS13B-201ENST00000355155 PTGER3P43115 390 aa17.18■□□□□ 0.34
VPS13B-201ENST00000355155 KRT72Q14CN4 511 aa17.18■□□□□ 0.34
VPS13B-201ENST00000355155 ZDHHC20Q5W0Z9 365 aa17.18■□□□□ 0.34
VPS13B-201ENST00000355155 TMEM215Q68D42 235 aa17.18■□□□□ 0.34
VPS13B-201ENST00000355155 SCRN2Q96FV2 425 aa17.18■□□□□ 0.34
VPS13B-201ENST00000355155 TUBB6Q9BUF5 446 aa17.18■□□□□ 0.34
VPS13B-201ENST00000355155 SORCS3Q9UPU3 1222 aa17.18■□□□□ 0.34
VPS13B-201ENST00000355155 GMPRP36959 345 aa17.17■□□□□ 0.34
VPS13B-201ENST00000355155 ABL2P42684 1182 aa17.17■□□□□ 0.34
VPS13B-201ENST00000355155 SETDB1Q15047 1291 aa17.17■□□□□ 0.34
VPS13B-201ENST00000355155 ASRGL1Q7L266 308 aa17.17■□□□□ 0.34
VPS13B-201ENST00000355155 ZSWIM9Q86XI8 627 aa17.17■□□□□ 0.34
VPS13B-201ENST00000355155 MRPL38Q96DV4 380 aaKnown RBP17.17■□□□□ 0.34
VPS13B-201ENST00000355155 LRRC37BQ96QE4 947 aa17.17■□□□□ 0.34
VPS13B-201ENST00000355155 GATA5Q9BWX5 397 aaPredicted RBP17.17■□□□□ 0.34
VPS13B-201ENST00000355155 DKK3Q9UBP4 350 aa17.17■□□□□ 0.34
VPS13B-201ENST00000355155 FKBPLQ9UIM3 349 aa17.17■□□□□ 0.34
VPS13B-201ENST00000355155 PKP3Q9Y446 797 aa17.17■□□□□ 0.34
VPS13B-201ENST00000355155 MYO1CO00159 1063 aa17.17■□□□□ 0.34
VPS13B-201ENST00000355155 DLX3O60479 287 aa17.17■□□□□ 0.34
VPS13B-201ENST00000355155 FCARP24071 287 aa17.17■□□□□ 0.34
VPS13B-201ENST00000355155 MC4RP32245 332 aa17.17■□□□□ 0.34
VPS13B-201ENST00000355155 PBX2P40425 430 aa17.17■□□□□ 0.34
VPS13B-201ENST00000355155 NAPRTQ6XQN6 538 aa17.17■□□□□ 0.34
VPS13B-201ENST00000355155 TPRG1Q6ZUI0 275 aa17.17■□□□□ 0.34
VPS13B-201ENST00000355155 SMARCD2Q92925 531 aa17.17■□□□□ 0.34
VPS13B-201ENST00000355155 TFB2MQ9H5Q4 396 aaKnown RBP17.17■□□□□ 0.34
VPS13B-201ENST00000355155 XPR1Q9UBH6 696 aa17.17■□□□□ 0.34
VPS13B-201ENST00000355155 PCDHB1Q9Y5F3 818 aa17.17■□□□□ 0.34
VPS13B-201ENST00000355155 WNT6Q9Y6F9 365 aa17.17■□□□□ 0.34
VPS13B-201ENST00000355155 CCL22O00626 93 aa17.16■□□□□ 0.34
VPS13B-201ENST00000355155 PIGNO95427 931 aa17.16■□□□□ 0.34
VPS13B-201ENST00000355155 ADH1CP00326 375 aa17.16■□□□□ 0.34
VPS13B-201ENST00000355155 ZNF37AP17032 561 aaPredicted RBP17.16■□□□□ 0.34
VPS13B-201ENST00000355155 HNF1BP35680 557 aa17.16■□□□□ 0.34
VPS13B-201ENST00000355155 NAA20P61599 178 aa17.16■□□□□ 0.34
VPS13B-201ENST00000355155 TUBB3Q13509 450 aa17.16■□□□□ 0.34
VPS13B-201ENST00000355155 ITGA9Q13797 1035 aa17.16■□□□□ 0.34
VPS13B-201ENST00000355155 RCN2Q14257 317 aa17.16■□□□□ 0.34
VPS13B-201ENST00000355155 KLC3Q6P597 504 aa17.16■□□□□ 0.34
VPS13B-201ENST00000355155 LYSMD3Q7Z3D4 306 aa17.16■□□□□ 0.34
VPS13B-201ENST00000355155 NDNQ99608 321 aa17.16■□□□□ 0.34
VPS13B-201ENST00000355155 TM6SF2Q9BZW4 377 aa17.16■□□□□ 0.34
VPS13B-201ENST00000355155 DERL2Q9GZP9 239 aa17.16■□□□□ 0.34
VPS13B-201ENST00000355155 WWP1Q9H0M0 922 aa17.16■□□□□ 0.34
VPS13B-201ENST00000355155 NKX2-4Q9H2Z4 354 aa17.16■□□□□ 0.34
VPS13B-201ENST00000355155 SYTL2Q9HCH5 934 aa17.16■□□□□ 0.34
VPS13B-201ENST00000355155 GPAMQ9HCL2 828 aa17.16■□□□□ 0.34
VPS13B-201ENST00000355155 LATS2Q9NRM7 1088 aa17.16■□□□□ 0.34
VPS13B-201ENST00000355155 DUS2Q9NX74 493 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms