RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 RIMBP3CA6NJZ7 1639 aa13.22□□□□□ -0.29
SCN8A-202ENST00000355133 RIMBP3BA6NNM3 1639 aa13.22□□□□□ -0.29
SCN8A-202ENST00000355133 RIMBP3Q9UFD9 1639 aa13.22□□□□□ -0.29
SCN8A-202ENST00000355133 KIDINS220Q9ULH0 1771 aa13.21□□□□□ -0.29
SCN8A-202ENST00000355133 BIRC5O15392 142 aa13.21□□□□□ -0.29
SCN8A-202ENST00000355133 GMFGO60234 142 aa13.21□□□□□ -0.29
SCN8A-202ENST00000355133 ADRA1BP35368 520 aa13.21□□□□□ -0.29
SCN8A-202ENST00000355133 CHST9Q7L1S5 443 aa13.21□□□□□ -0.29
SCN8A-202ENST00000355133 ULK2Q8IYT8 1036 aa13.21□□□□□ -0.29
SCN8A-202ENST00000355133 PARP8Q8N3A8 854 aa13.21□□□□□ -0.29
SCN8A-202ENST00000355133 CSPG4P5Q96PW8 444 aa13.21□□□□□ -0.29
SCN8A-202ENST00000355133 LHX5Q9H2C1 402 aa13.21□□□□□ -0.29
SCN8A-202ENST00000355133 EQTNQ9NQ60 294 aa13.21□□□□□ -0.29
SCN8A-202ENST00000355133 DEC1Q9P2X7 70 aa13.21□□□□□ -0.29
SCN8A-202ENST00000355133 ABHD14A-ACY1A0A1B0GW23 586 aa13.21□□□□□ -0.29
SCN8A-202ENST00000355133 TMEM88BA6NKF7 163 aa13.21□□□□□ -0.29
SCN8A-202ENST00000355133 MCIDASD6RGH6 385 aa13.21□□□□□ -0.29
SCN8A-202ENST00000355133 MFSD11O43934 449 aa13.21□□□□□ -0.29
SCN8A-202ENST00000355133 SSR2P43308 183 aa13.21□□□□□ -0.29
SCN8A-202ENST00000355133 EPS8Q12929 822 aa13.21□□□□□ -0.29
SCN8A-202ENST00000355133 RAPSNQ13702 412 aa13.21□□□□□ -0.29
SCN8A-202ENST00000355133 FAM110CQ1W6H9 321 aa13.21□□□□□ -0.29
SCN8A-202ENST00000355133 TIMM50Q3ZCQ8 353 aa13.21□□□□□ -0.29
SCN8A-202ENST00000355133 ANXA8L1Q5VT79 327 aa13.21□□□□□ -0.29
SCN8A-202ENST00000355133 TTC23Q5W5X9 447 aa13.21□□□□□ -0.29
SCN8A-202ENST00000355133 SLC24A5Q71RS6 500 aa13.21□□□□□ -0.29
SCN8A-202ENST00000355133 ANKRD23Q86SG2 305 aa13.21□□□□□ -0.29
SCN8A-202ENST00000355133 PHYKPLQ8IUZ5 450 aa13.21□□□□□ -0.29
SCN8A-202ENST00000355133 SMG7Q92540 1137 aaKnown RBP13.21□□□□□ -0.29
SCN8A-202ENST00000355133 TNKS2Q9H2K2 1166 aa13.21□□□□□ -0.29
SCN8A-202ENST00000355133 CD84Q9UIB8 345 aa13.21□□□□□ -0.29
SCN8A-202ENST00000355133 GGA2Q9UJY4 613 aa13.21□□□□□ -0.29
SCN8A-202ENST00000355133 IQCMA0A1B0GVH7 501 aa13.21□□□□□ -0.29
SCN8A-202ENST00000355133 E9PAM4 449 aa13.21□□□□□ -0.29
SCN8A-202ENST00000355133 PSMD11O00231 422 aa13.21□□□□□ -0.29
SCN8A-202ENST00000355133 MFN2O95140 757 aa13.21□□□□□ -0.29
SCN8A-202ENST00000355133 PCCBP05166 539 aa13.21□□□□□ -0.29
SCN8A-202ENST00000355133 ITPKBP27987 946 aa13.21□□□□□ -0.29
SCN8A-202ENST00000355133 SMIM11AP58511 58 aa13.21□□□□□ -0.29
SCN8A-202ENST00000355133 TRIM40Q6P9F5 258 aa13.21□□□□□ -0.29
SCN8A-202ENST00000355133 KLHL24Q6TFL4 600 aa13.21□□□□□ -0.29
SCN8A-202ENST00000355133 RPTNQ6XPR3 784 aa13.21□□□□□ -0.29
SCN8A-202ENST00000355133 TSHZ1Q6ZSZ6 1077 aa13.21□□□□□ -0.29
SCN8A-202ENST00000355133 C17orf64Q86WR6 236 aa13.21□□□□□ -0.29
SCN8A-202ENST00000355133 Q96MT0 163 aa13.21□□□□□ -0.29
SCN8A-202ENST00000355133 RACGAP1Q9H0H5 632 aa13.21□□□□□ -0.29
SCN8A-202ENST00000355133 SLCO1B3Q9NPD5 702 aa13.21□□□□□ -0.29
SCN8A-202ENST00000355133 CMTM6Q9NX76 183 aa13.21□□□□□ -0.29
SCN8A-202ENST00000355133 SLC17A7Q9P2U7 560 aa13.21□□□□□ -0.29
SCN8A-202ENST00000355133 TBC1D30Q9Y2I9 924 aa13.21□□□□□ -0.29
SCN8A-202ENST00000355133 RAI2Q9Y5P3 530 aa13.21□□□□□ -0.29
SCN8A-202ENST00000355133 PTPRJQ12913 1337 aa13.21□□□□□ -0.3
SCN8A-202ENST00000355133 TP73O15350 636 aa13.21□□□□□ -0.3
SCN8A-202ENST00000355133 MGRN1O60291 552 aa13.21□□□□□ -0.3
SCN8A-202ENST00000355133 SERPINB7O75635 380 aa13.21□□□□□ -0.3
SCN8A-202ENST00000355133 RPP40O75818 363 aaKnown RBP13.21□□□□□ -0.3
SCN8A-202ENST00000355133 PDE9AO76083 593 aa13.21□□□□□ -0.3
SCN8A-202ENST00000355133 UNC5CO95185 931 aa13.21□□□□□ -0.3
SCN8A-202ENST00000355133 CYP4B1P13584 511 aa13.21□□□□□ -0.3
SCN8A-202ENST00000355133 ADSLP30566 484 aaPredicted RBP13.21□□□□□ -0.3
SCN8A-202ENST00000355133 CLCNKBP51801 687 aa13.21□□□□□ -0.3
SCN8A-202ENST00000355133 SPIRE1Q08AE8 756 aa13.21□□□□□ -0.3
SCN8A-202ENST00000355133 SF1Q15637 639 aaKnown RBP13.21□□□□□ -0.3
SCN8A-202ENST00000355133 FNBP1LQ5T0N5 605 aa13.21□□□□□ -0.3
SCN8A-202ENST00000355133 ARMC3Q5W041 872 aa13.21□□□□□ -0.3
SCN8A-202ENST00000355133 STRADAQ7RTN6 431 aa13.21□□□□□ -0.3
SCN8A-202ENST00000355133 CUZD1Q86UP6 607 aa13.21□□□□□ -0.3
SCN8A-202ENST00000355133 ALOX15BO15296 676 aa13.21□□□□□ -0.3
SCN8A-202ENST00000355133 B4GALT4O60513 344 aa13.21□□□□□ -0.3
SCN8A-202ENST00000355133 RNASEH2AO75792 299 aaKnown RBP13.21□□□□□ -0.3
SCN8A-202ENST00000355133 KRT36O76013 467 aa13.21□□□□□ -0.3
SCN8A-202ENST00000355133 CST3P01034 146 aaPredicted RBP13.21□□□□□ -0.3
SCN8A-202ENST00000355133 IDO1P14902 403 aa13.21□□□□□ -0.3
SCN8A-202ENST00000355133 EIF2B2P49770 351 aaKnown RBP13.21□□□□□ -0.3
SCN8A-202ENST00000355133 CHSY3Q70JA7 882 aa13.21□□□□□ -0.3
SCN8A-202ENST00000355133 TMPRSS11BQ86T26 416 aa13.21□□□□□ -0.3
SCN8A-202ENST00000355133 ZNF248Q8NDW4 579 aa13.21□□□□□ -0.3
SCN8A-202ENST00000355133 CLP1Q92989 425 aaKnown RBP13.21□□□□□ -0.3
SCN8A-202ENST00000355133 SLC47A1Q96FL8 570 aa13.21□□□□□ -0.3
SCN8A-202ENST00000355133 INPP4AQ96PE3 977 aaPredicted RBP13.21□□□□□ -0.3
SCN8A-202ENST00000355133 NPAS2Q99743 824 aa13.21□□□□□ -0.3
SCN8A-202ENST00000355133 TBC1D10AQ9BXI6 508 aa13.21□□□□□ -0.3
SCN8A-202ENST00000355133 KLRG2A4D1S0 409 aaPredicted RBP13.2□□□□□ -0.3
SCN8A-202ENST00000355133 FFAR2O15552 330 aa13.2□□□□□ -0.3
SCN8A-202ENST00000355133 SLC22A3O75751 556 aa13.2□□□□□ -0.3
SCN8A-202ENST00000355133 FGF19O95750 216 aa13.2□□□□□ -0.3
SCN8A-202ENST00000355133 SLC6A2P23975 617 aa13.2□□□□□ -0.3
SCN8A-202ENST00000355133 IL12RB1P42701 662 aa13.2□□□□□ -0.3
SCN8A-202ENST00000355133 CHN2P52757 468 aa13.2□□□□□ -0.3
SCN8A-202ENST00000355133 TAS2R41P59536 307 aa13.2□□□□□ -0.3
SCN8A-202ENST00000355133 IRGCQ6NXR0 463 aa13.2□□□□□ -0.3
SCN8A-202ENST00000355133 LCLAT1Q6UWP7 414 aa13.2□□□□□ -0.3
SCN8A-202ENST00000355133 ALG3Q92685 438 aa13.2□□□□□ -0.3
SCN8A-202ENST00000355133 ZNF354BQ96LW1 612 aa13.2□□□□□ -0.3
SCN8A-202ENST00000355133 ZNF607Q96SK3 696 aa13.2□□□□□ -0.3
SCN8A-202ENST00000355133 PDZD7Q9H5P4 517 aa13.2□□□□□ -0.3
SCN8A-202ENST00000355133 CILPO75339 1184 aa13.2□□□□□ -0.3
SCN8A-202ENST00000355133 FAM155BO75949 473 aa13.2□□□□□ -0.3
SCN8A-202ENST00000355133 EPHX1P07099 455 aa13.2□□□□□ -0.3
SCN8A-202ENST00000355133 SERPINA6P08185 405 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms