RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 NACC2Q96BF6 587 aa9.39□□□□□ -0.91
SMG6-202ENST00000354901 PCED1BQ96HM7 432 aa9.39□□□□□ -0.91
SMG6-202ENST00000354901 GAD1Q99259 594 aa9.39□□□□□ -0.91
SMG6-202ENST00000354901 PAAF1Q9BRP4 392 aa9.39□□□□□ -0.91
SMG6-202ENST00000354901 FTHL17Q9BXU8 183 aa9.39□□□□□ -0.91
SMG6-202ENST00000354901 ACE2Q9BYF1 805 aaPredicted RBP9.39□□□□□ -0.91
SMG6-202ENST00000354901 WDCPQ9H6R7 721 aa9.39□□□□□ -0.91
SMG6-202ENST00000354901 GDAP2Q9NXN4 497 aa9.39□□□□□ -0.91
SMG6-202ENST00000354901 GMPR2Q9P2T1 348 aaKnown RBP9.39□□□□□ -0.91
SMG6-202ENST00000354901 RUVBL2Q9Y230 463 aaKnown RBP9.39□□□□□ -0.91
SMG6-202ENST00000354901 PCDHB12Q9Y5F1 795 aa9.39□□□□□ -0.91
SMG6-202ENST00000354901 CDY2AQ9Y6F7 541 aa9.39□□□□□ -0.91
SMG6-202ENST00000354901 CDY1Q9Y6F8 540 aa9.39□□□□□ -0.91
SMG6-202ENST00000354901 PLXNB2O15031 1838 aa9.39□□□□□ -0.91
SMG6-202ENST00000354901 GOLGA8CPA6NN73 597 aa9.39□□□□□ -0.91
SMG6-202ENST00000354901 H0Y858 1186 aa9.39□□□□□ -0.91
SMG6-202ENST00000354901 SNPHO15079 494 aa9.39□□□□□ -0.91
SMG6-202ENST00000354901 PMPCBO75439 489 aa9.39□□□□□ -0.91
SMG6-202ENST00000354901 LRIG2O94898 1065 aa9.39□□□□□ -0.91
SMG6-202ENST00000354901 VAPBO95292 243 aa9.39□□□□□ -0.91
SMG6-202ENST00000354901 ARSAP15289 507 aa9.39□□□□□ -0.91
SMG6-202ENST00000354901 ZNF26P17031 533 aaPredicted RBP9.39□□□□□ -0.91
SMG6-202ENST00000354901 MATN1P21941 496 aa9.39□□□□□ -0.91
SMG6-202ENST00000354901 TPD52P55327 224 aaPredicted RBP9.39□□□□□ -0.91
SMG6-202ENST00000354901 RPL26P61254 145 aaKnown RBP9.39□□□□□ -0.91
SMG6-202ENST00000354901 TUBA1BP68363 451 aa9.39□□□□□ -0.91
SMG6-202ENST00000354901 MPP1Q00013 466 aa9.39□□□□□ -0.91
SMG6-202ENST00000354901 IFITM2Q01629 132 aa9.39□□□□□ -0.91
SMG6-202ENST00000354901 PIGFQ07326 219 aa9.39□□□□□ -0.91
SMG6-202ENST00000354901 TUBA1AQ71U36 451 aa9.39□□□□□ -0.91
SMG6-202ENST00000354901 RPS27LQ71UM5 84 aaKnown RBP9.39□□□□□ -0.91
SMG6-202ENST00000354901 PMEPA1Q969W9 287 aa9.39□□□□□ -0.91
SMG6-202ENST00000354901 TSNARE1Q96NA8 513 aa9.39□□□□□ -0.91
SMG6-202ENST00000354901 SMOQ99835 787 aa9.39□□□□□ -0.91
SMG6-202ENST00000354901 C1orf50Q9BV19 199 aa9.39□□□□□ -0.91
SMG6-202ENST00000354901 NPLQ9BXD5 320 aaPredicted RBP9.39□□□□□ -0.91
SMG6-202ENST00000354901 RAD21L1Q9H4I0 556 aa9.39□□□□□ -0.91
SMG6-202ENST00000354901 SPC25Q9HBM1 224 aa9.39□□□□□ -0.91
SMG6-202ENST00000354901 NRCAMQ92823 1304 aa9.39□□□□□ -0.91
SMG6-202ENST00000354901 RRN3P2A6NIE6 340 aa9.39□□□□□ -0.91
SMG6-202ENST00000354901 A8MX80 341 aa9.39□□□□□ -0.91
SMG6-202ENST00000354901 SOCS2O14508 198 aa9.39□□□□□ -0.91
SMG6-202ENST00000354901 PTGESO14684 152 aa9.39□□□□□ -0.91
SMG6-202ENST00000354901 MOCS2O96007 188 aaPredicted RBP9.39□□□□□ -0.91
SMG6-202ENST00000354901 GRIA4P48058 902 aa9.39□□□□□ -0.91
SMG6-202ENST00000354901 POLD3Q15054 466 aaPredicted RBP9.39□□□□□ -0.91
SMG6-202ENST00000354901 PAFAH1B3Q15102 231 aaKnown RBP9.39□□□□□ -0.91
SMG6-202ENST00000354901 ARL13AQ5H913 290 aaPredicted RBP9.39□□□□□ -0.91
SMG6-202ENST00000354901 UBXN11Q5T124 520 aa9.39□□□□□ -0.91
SMG6-202ENST00000354901 ZFP1Q6P2D0 407 aa9.39□□□□□ -0.91
SMG6-202ENST00000354901 NEK5Q6P3R8 708 aa9.39□□□□□ -0.91
SMG6-202ENST00000354901 PDZD4Q76G19 769 aaPredicted RBP9.39□□□□□ -0.91
SMG6-202ENST00000354901 ITIH5Q86UX2 942 aa9.39□□□□□ -0.91
SMG6-202ENST00000354901 PIAS4Q8N2W9 510 aaPredicted RBP9.39□□□□□ -0.91
SMG6-202ENST00000354901 SMG8Q8ND04 991 aaKnown RBP9.39□□□□□ -0.91
SMG6-202ENST00000354901 ZNF486Q96H40 463 aaPredicted RBP9.39□□□□□ -0.91
SMG6-202ENST00000354901 PARK7Q99497 189 aaKnown RBP9.39□□□□□ -0.91
SMG6-202ENST00000354901 ABHD16BQ9H3Z7 469 aa9.39□□□□□ -0.91
SMG6-202ENST00000354901 NEK6Q9HC98 313 aa9.39□□□□□ -0.91
SMG6-202ENST00000354901 CYP4F12Q9HCS2 524 aa9.39□□□□□ -0.91
SMG6-202ENST00000354901 EIF2B3Q9NR50 452 aaKnown RBP9.39□□□□□ -0.91
SMG6-202ENST00000354901 TRAF6Q9Y4K3 522 aa9.39□□□□□ -0.91
SMG6-202ENST00000354901 NEMP2A6NFY4 417 aa9.38□□□□□ -0.91
SMG6-202ENST00000354901 TOMM70O94826 608 aa9.38□□□□□ -0.91
SMG6-202ENST00000354901 CDH1P12830 882 aa9.38□□□□□ -0.91
SMG6-202ENST00000354901 IFI30P13284 250 aa9.38□□□□□ -0.91
SMG6-202ENST00000354901 PNPLA4P41247 253 aa9.38□□□□□ -0.91
SMG6-202ENST00000354901 MLLT3P42568 568 aaPredicted RBP9.38□□□□□ -0.91
SMG6-202ENST00000354901 HARS2P49590 506 aaKnown RBP9.38□□□□□ -0.91
SMG6-202ENST00000354901 CLCNKBP51801 687 aa9.38□□□□□ -0.91
SMG6-202ENST00000354901 DAOAP59103 153 aa9.38□□□□□ -0.91
SMG6-202ENST00000354901 MFSD10Q14728 455 aa9.38□□□□□ -0.91
SMG6-202ENST00000354901 LSM12Q3MHD2 195 aaKnown RBP9.38□□□□□ -0.91
SMG6-202ENST00000354901 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.38□□□□□ -0.914e-8■■■■□ 21.6
SMG6-202ENST00000354901 IQSEC1Q6DN90 963 aa9.38□□□□□ -0.91
SMG6-202ENST00000354901 CYS1Q717R9 158 aa9.38□□□□□ -0.91
SMG6-202ENST00000354901 FAM35AQ86V20 835 aa9.38□□□□□ -0.91
SMG6-202ENST00000354901 ELMOD2Q8IZ81 293 aa9.38□□□□□ -0.91
SMG6-202ENST00000354901 ELMOD1Q8N336 334 aa9.38□□□□□ -0.91
SMG6-202ENST00000354901 PTCD2Q8WV60 388 aaKnown RBP9.38□□□□□ -0.91
SMG6-202ENST00000354901 MS4A4AQ96JQ5 239 aa9.38□□□□□ -0.91
SMG6-202ENST00000354901 CNDP1Q96KN2 507 aa9.38□□□□□ -0.91
SMG6-202ENST00000354901 OLFM1Q99784 485 aa9.38□□□□□ -0.91
SMG6-202ENST00000354901 COLEC11Q9BWP8 271 aa9.38□□□□□ -0.91
SMG6-202ENST00000354901 ILKAPQ9H0C8 392 aaPredicted RBP9.38□□□□□ -0.91
SMG6-202ENST00000354901 ADPRHL2Q9NX46 363 aa9.38□□□□□ -0.91
SMG6-202ENST00000354901 RCOR3Q9P2K3 495 aaPredicted RBP9.38□□□□□ -0.91
SMG6-202ENST00000354901 SEPT3Q9UH03 358 aa9.38□□□□□ -0.91
SMG6-202ENST00000354901 PCDHGA7Q9Y5G6 932 aa9.38□□□□□ -0.91
SMG6-202ENST00000354901 PCDHGA11Q9Y5H2 935 aa9.38□□□□□ -0.91
SMG6-202ENST00000354901 LINC00854A0A1B0GVQ3 168 aa9.38□□□□□ -0.91
SMG6-202ENST00000354901 ILVBLA1L0T0 632 aa9.38□□□□□ -0.91
SMG6-202ENST00000354901 CLDN25C9JDP6 229 aa9.38□□□□□ -0.91
SMG6-202ENST00000354901 XYLBO75191 536 aa9.38□□□□□ -0.91
SMG6-202ENST00000354901 CLPXO76031 633 aa9.38□□□□□ -0.91
SMG6-202ENST00000354901 HDCP19113 662 aa9.38□□□□□ -0.91
SMG6-202ENST00000354901 GABRB3P28472 473 aa9.38□□□□□ -0.91
SMG6-202ENST00000354901 CCT8P50990 548 aa9.38□□□□□ -0.91
SMG6-202ENST00000354901 PLK1P53350 603 aa9.38□□□□□ -0.91
SMG6-202ENST00000354901 NOMO2Q5JPE7 1267 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms