RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 TSPAN33Q86UF1 283 aa20.52■□□□□ 0.88
TRIM4-202ENST00000354241 ARMC2Q8NEN0 867 aa20.52■□□□□ 0.88
TRIM4-202ENST00000354241 CHFRQ96EP1 664 aa20.52■□□□□ 0.88
TRIM4-202ENST00000354241 FAM96AQ9H5X1 160 aa20.52■□□□□ 0.88
TRIM4-202ENST00000354241 CRYL1Q9Y2S2 319 aa20.52■□□□□ 0.88
TRIM4-202ENST00000354241 PPIL1Q9Y3C6 166 aa20.52■□□□□ 0.88
TRIM4-202ENST00000354241 TCF20Q9UGU0 1960 aaKnown RBP20.52■□□□□ 0.87
TRIM4-202ENST00000354241 TCP11X1B4DZS4 312 aa20.51■□□□□ 0.87
TRIM4-202ENST00000354241 ARNTLO00327 626 aa20.51■□□□□ 0.87
TRIM4-202ENST00000354241 PHGDHO43175 533 aaKnown RBP20.51■□□□□ 0.87
TRIM4-202ENST00000354241 KAT7O95251 611 aa20.51■□□□□ 0.87
TRIM4-202ENST00000354241 C2P06681 752 aa20.51■□□□□ 0.87
TRIM4-202ENST00000354241 VIMP08670 466 aaKnown RBP20.51■□□□□ 0.87
TRIM4-202ENST00000354241 FOXN2P32314 431 aa20.51■□□□□ 0.87
TRIM4-202ENST00000354241 EIF2DP41214 584 aaKnown RBP20.51■□□□□ 0.87
TRIM4-202ENST00000354241 POLD2P49005 469 aa20.51■□□□□ 0.87
TRIM4-202ENST00000354241 SLC12A2P55011 1212 aa20.51■□□□□ 0.87
TRIM4-202ENST00000354241 POLR2LP62875 67 aaKnown RBP20.51■□□□□ 0.87
TRIM4-202ENST00000354241 IRF9Q00978 393 aa20.51■□□□□ 0.87
TRIM4-202ENST00000354241 PEX6Q13608 980 aa20.51■□□□□ 0.87
TRIM4-202ENST00000354241 BRAT1Q6PJG6 821 aa20.51■□□□□ 0.87
TRIM4-202ENST00000354241 TPRG1Q6ZUI0 275 aa20.51■□□□□ 0.87
TRIM4-202ENST00000354241 LYSMD1Q96S90 227 aa20.51■□□□□ 0.87
TRIM4-202ENST00000354241 TLK1Q9UKI8 766 aa20.51■□□□□ 0.87
TRIM4-202ENST00000354241 BRWD1Q9NSI6 2320 aa20.51■□□□□ 0.87
TRIM4-202ENST00000354241 H7C0S8 307 aa20.51■□□□□ 0.87
TRIM4-202ENST00000354241 SOX1O00570 391 aaPredicted RBP20.51■□□□□ 0.87
TRIM4-202ENST00000354241 STMN1P16949 149 aa20.51■□□□□ 0.87
TRIM4-202ENST00000354241 SOX9P48436 509 aa20.51■□□□□ 0.87
TRIM4-202ENST00000354241 STC1P52823 247 aa20.51■□□□□ 0.87
TRIM4-202ENST00000354241 TAF1BQ53T94 588 aaPredicted RBP20.51■□□□□ 0.87
TRIM4-202ENST00000354241 N4BP2L1Q5TBK1 243 aaPredicted RBP20.51■□□□□ 0.87
TRIM4-202ENST00000354241 C16orf46Q6P387 395 aa20.51■□□□□ 0.87
TRIM4-202ENST00000354241 CRTC1Q6UUV9 634 aa20.51■□□□□ 0.87
TRIM4-202ENST00000354241 LRRC34Q8IZ02 419 aa20.51■□□□□ 0.87
TRIM4-202ENST00000354241 KDM1BQ8NB78 822 aa20.51■□□□□ 0.87
TRIM4-202ENST00000354241 ZNF317Q96PQ6 595 aaPredicted RBP20.51■□□□□ 0.87
TRIM4-202ENST00000354241 CCT8L2Q96SF2 557 aa20.51■□□□□ 0.87
TRIM4-202ENST00000354241 OMDQ99983 421 aa20.51■□□□□ 0.87
TRIM4-202ENST00000354241 OSBPL1AQ9BXW6 950 aa20.51■□□□□ 0.87
TRIM4-202ENST00000354241 BPTFQ12830 3046 aa20.5■□□□□ 0.87
TRIM4-202ENST00000354241 ZNF106Q9H2Y7 1883 aaKnown RBP20.5■□□□□ 0.87
TRIM4-202ENST00000354241 EDDM13A0A1B0GTR0 161 aa20.5■□□□□ 0.87
TRIM4-202ENST00000354241 APODP05090 189 aa20.5■□□□□ 0.87
TRIM4-202ENST00000354241 DHRS4L1P0CG22 281 aa20.5■□□□□ 0.87
TRIM4-202ENST00000354241 CDKN1CP49918 316 aaPredicted RBP20.5■□□□□ 0.87
TRIM4-202ENST00000354241 TAS2R39P59534 338 aa20.5■□□□□ 0.87
TRIM4-202ENST00000354241 RAB10P61026 200 aa20.5■□□□□ 0.87
TRIM4-202ENST00000354241 IRX4P78413 519 aa20.5■□□□□ 0.87
TRIM4-202ENST00000354241 POU4F1Q01851 419 aa20.5■□□□□ 0.87
TRIM4-202ENST00000354241 ZNF460Q14592 562 aa20.5■□□□□ 0.87
TRIM4-202ENST00000354241 PDK4Q16654 411 aa20.5■□□□□ 0.87
TRIM4-202ENST00000354241 TYSND1Q2T9J0 566 aa20.5■□□□□ 0.87
TRIM4-202ENST00000354241 POM121L1PQ3SYA9 428 aa20.5■□□□□ 0.87
TRIM4-202ENST00000354241 PREPLQ4J6C6 727 aaPredicted RBP20.5■□□□□ 0.87
TRIM4-202ENST00000354241 LRRC66Q68CR7 880 aa20.5■□□□□ 0.87
TRIM4-202ENST00000354241 PSAPL1Q6NUJ1 521 aa20.5■□□□□ 0.87
TRIM4-202ENST00000354241 SERPINA13PQ6UXR4 307 aa20.5■□□□□ 0.87
TRIM4-202ENST00000354241 CEP97Q8IW35 865 aa20.5■□□□□ 0.87
TRIM4-202ENST00000354241 STK40Q8N2I9 435 aa20.5■□□□□ 0.87
TRIM4-202ENST00000354241 CCDC63Q8NA47 563 aa20.5■□□□□ 0.87
TRIM4-202ENST00000354241 CSGALNACT1Q8TDX6 532 aa20.5■□□□□ 0.87
TRIM4-202ENST00000354241 LRIG1Q96JA1 1093 aa20.5■□□□□ 0.87
TRIM4-202ENST00000354241 MCCC1Q96RQ3 725 aaPredicted RBP20.5■□□□□ 0.87
TRIM4-202ENST00000354241 ZDHHC4Q9NPG8 344 aa20.5■□□□□ 0.87
TRIM4-202ENST00000354241 GRXCR2A6NFK2 248 aa20.49■□□□□ 0.87
TRIM4-202ENST00000354241 ANHXE9PGG2 379 aa20.49■□□□□ 0.87
TRIM4-202ENST00000354241 NDUFAB1O14561 156 aa20.49■□□□□ 0.87
TRIM4-202ENST00000354241 GRIA2P42262 883 aa20.49■□□□□ 0.87
TRIM4-202ENST00000354241 XIAPP98170 497 aa20.49■□□□□ 0.87
TRIM4-202ENST00000354241 INSCQ1MX18 579 aa20.49■□□□□ 0.87
TRIM4-202ENST00000354241 HNRNPA1L2Q32P51 320 aaKnown RBP20.49■□□□□ 0.87
TRIM4-202ENST00000354241 HECTD2Q5U5R9 776 aa20.49■□□□□ 0.87
TRIM4-202ENST00000354241 FAM151BQ6UXP7 276 aa20.49■□□□□ 0.87
TRIM4-202ENST00000354241 KYAT3Q6YP21 454 aaKnown RBP20.49■□□□□ 0.87
TRIM4-202ENST00000354241 CPLX4Q7Z7G2 160 aa20.49■□□□□ 0.87
TRIM4-202ENST00000354241 PLD6Q8N2A8 252 aaKnown RBP20.49■□□□□ 0.87
TRIM4-202ENST00000354241 LRRC8CQ8TDW0 803 aa20.49■□□□□ 0.87
TRIM4-202ENST00000354241 INTS10Q9NVR2 710 aaKnown RBP20.49■□□□□ 0.87
TRIM4-202ENST00000354241 ZNF358Q9NW07 568 aa20.49■□□□□ 0.87
TRIM4-202ENST00000354241 B4GALT6Q9UBX8 382 aa20.49■□□□□ 0.87
TRIM4-202ENST00000354241 SLC30A1Q9Y6M5 507 aa20.49■□□□□ 0.87
TRIM4-202ENST00000354241 TRIOBPQ9H2D6 2365 aa20.49■□□□□ 0.87
TRIM4-202ENST00000354241 UBA6A0AVT1 1052 aaPredicted RBP20.49■□□□□ 0.87
TRIM4-202ENST00000354241 NDUFS3O75489 264 aa20.49■□□□□ 0.87
TRIM4-202ENST00000354241 FAM107AO95990 144 aa20.49■□□□□ 0.87
TRIM4-202ENST00000354241 NEFHP12036 1026 aa20.49■□□□□ 0.87
TRIM4-202ENST00000354241 TAC1P20366 129 aa20.49■□□□□ 0.87
TRIM4-202ENST00000354241 CRABP2P29373 138 aa20.49■□□□□ 0.87
TRIM4-202ENST00000354241 SERPINB4P48594 390 aa20.49■□□□□ 0.87
TRIM4-202ENST00000354241 CSRP3P50461 194 aa20.49■□□□□ 0.87
TRIM4-202ENST00000354241 CCDC85BQ15834 202 aaPredicted RBP20.49■□□□□ 0.87
TRIM4-202ENST00000354241 AAK1Q2M2I8 961 aa20.49■□□□□ 0.87
TRIM4-202ENST00000354241 ZNF805Q5CZA5 627 aa20.49■□□□□ 0.87
TRIM4-202ENST00000354241 TAS2R42Q7RTR8 314 aa20.49■□□□□ 0.87
TRIM4-202ENST00000354241 OLFM1Q99784 485 aa20.49■□□□□ 0.87
TRIM4-202ENST00000354241 TMEM216Q9P0N5 145 aa20.49■□□□□ 0.87
TRIM4-202ENST00000354241 EMCNQ9ULC0 261 aa20.49■□□□□ 0.87
TRIM4-202ENST00000354241 ANKRD6Q9Y2G4 727 aa20.49■□□□□ 0.87
TRIM4-202ENST00000354241 ANTXRLA6NF34 631 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms