RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 RAB6CQ9H0N0 254 aa13.71□□□□□ -0.22
SMC6-201ENST00000351948 HNRNPCL2B2RXH8 293 aa13.7□□□□□ -0.22
SMC6-201ENST00000351948 FSBPO95073 299 aa13.7□□□□□ -0.22
SMC6-201ENST00000351948 UGT1A6P19224 532 aa13.7□□□□□ -0.22
SMC6-201ENST00000351948 UGT1A1P22309 533 aa13.7□□□□□ -0.22
SMC6-201ENST00000351948 UGT1A4P22310 534 aa13.7□□□□□ -0.22
SMC6-201ENST00000351948 UGT1A3P35503 534 aa13.7□□□□□ -0.22
SMC6-201ENST00000351948 UGT1A5P35504 534 aa13.7□□□□□ -0.22
SMC6-201ENST00000351948 CENPAP49450 140 aa13.7□□□□□ -0.22
SMC6-201ENST00000351948 PDK4Q16654 411 aa13.7□□□□□ -0.22
SMC6-201ENST00000351948 C14orf80Q86SX3 495 aa13.7□□□□□ -0.22
SMC6-201ENST00000351948 MMAAQ8IVH4 418 aaKnown RBP13.7□□□□□ -0.22
SMC6-201ENST00000351948 ZC3H3Q8IXZ2 948 aaKnown RBP13.7□□□□□ -0.22
SMC6-201ENST00000351948 DNAJC9Q8WXX5 260 aa13.7□□□□□ -0.22
SMC6-201ENST00000351948 WDR55Q9H6Y2 383 aaPredicted RBP13.7□□□□□ -0.22
SMC6-201ENST00000351948 TM4SF4P48230 202 aa13.7□□□□□ -0.22
SMC6-201ENST00000351948 B3GNT9Q6UX72 402 aa13.7□□□□□ -0.22
SMC6-201ENST00000351948 GPRIN3Q6ZVF9 776 aa13.7□□□□□ -0.22
SMC6-201ENST00000351948 CEP68Q76N32 757 aa13.7□□□□□ -0.22
SMC6-201ENST00000351948 ZNF598Q86UK7 904 aaKnown RBP13.7□□□□□ -0.22
SMC6-201ENST00000351948 PARGQ86W56 976 aa13.7□□□□□ -0.22
SMC6-201ENST00000351948 SLC35B2Q8TB61 432 aa13.7□□□□□ -0.22
SMC6-201ENST00000351948 ABHD8Q96I13 439 aa13.7□□□□□ -0.22
SMC6-201ENST00000351948 TPD52L3Q96J77 140 aa13.7□□□□□ -0.22
SMC6-201ENST00000351948 FEM1CQ96JP0 617 aa13.7□□□□□ -0.22
SMC6-201ENST00000351948 CEP19Q96LK0 163 aa13.7□□□□□ -0.22
SMC6-201ENST00000351948 C8orf48Q96LL4 319 aa13.7□□□□□ -0.22
SMC6-201ENST00000351948 RAD9AQ99638 391 aa13.7□□□□□ -0.22
SMC6-201ENST00000351948 MYH11P35749 1972 aa13.7□□□□□ -0.22
SMC6-201ENST00000351948 SNX3O60493 162 aa13.7□□□□□ -0.22
SMC6-201ENST00000351948 LBPP18428 481 aa13.7□□□□□ -0.22
SMC6-201ENST00000351948 SLC25A3Q00325 362 aa13.7□□□□□ -0.22
SMC6-201ENST00000351948 TSTD2Q5T7W7 516 aa13.7□□□□□ -0.22
SMC6-201ENST00000351948 MBLAC2Q68D91 279 aa13.7□□□□□ -0.22
SMC6-201ENST00000351948 CYP20A1Q6UW02 462 aa13.7□□□□□ -0.22
SMC6-201ENST00000351948 SERPINA9Q86WD7 417 aa13.7□□□□□ -0.22
SMC6-201ENST00000351948 CFAP206Q8IYR0 622 aa13.7□□□□□ -0.22
SMC6-201ENST00000351948 CYP4X1Q8N118 509 aa13.7□□□□□ -0.22
SMC6-201ENST00000351948 WDTC1Q8N5D0 677 aa13.7□□□□□ -0.22
SMC6-201ENST00000351948 TNIP2Q8NFZ5 429 aa13.7□□□□□ -0.22
SMC6-201ENST00000351948 YIPF3Q9GZM5 350 aa13.7□□□□□ -0.22
SMC6-201ENST00000351948 CD248Q9HCU0 757 aa13.7□□□□□ -0.22
SMC6-201ENST00000351948 POLR3BQ9NW08 1133 aaPredicted RBP13.7□□□□□ -0.22
SMC6-201ENST00000351948 HCSTQ9UBK5 93 aa13.7□□□□□ -0.22
SMC6-201ENST00000351948 SAC3D1A6NKF1 404 aa13.7□□□□□ -0.22
SMC6-201ENST00000351948 FAM72CH0Y354 149 aa13.7□□□□□ -0.22
SMC6-201ENST00000351948 AXIN1O15169 862 aa13.7□□□□□ -0.22
SMC6-201ENST00000351948 PRKAA2P54646 552 aa13.7□□□□□ -0.22
SMC6-201ENST00000351948 PAGE2BQ5JRK9 111 aa13.7□□□□□ -0.22
SMC6-201ENST00000351948 FAM72AQ5TYM5 149 aa13.7□□□□□ -0.22
SMC6-201ENST00000351948 FAM72DQ6L9T8 149 aa13.7□□□□□ -0.22
SMC6-201ENST00000351948 FSTL4Q6MZW2 842 aa13.7□□□□□ -0.22
SMC6-201ENST00000351948 ALYREFQ86V81 257 aaKnown RBP13.7□□□□□ -0.22
SMC6-201ENST00000351948 FAM72BQ86X60 149 aa13.7□□□□□ -0.22
SMC6-201ENST00000351948 FAM9CQ8IZT9 166 aa13.7□□□□□ -0.22
SMC6-201ENST00000351948 CATSPER1Q8NEC5 780 aa13.7□□□□□ -0.22
SMC6-201ENST00000351948 CLHC1Q8NHS4 586 aa13.7□□□□□ -0.22
SMC6-201ENST00000351948 STYXQ8WUJ0 223 aa13.7□□□□□ -0.22
SMC6-201ENST00000351948 CNBD2Q96M20 576 aa13.7□□□□□ -0.22
SMC6-201ENST00000351948 SMOC2Q9H3U7 446 aa13.7□□□□□ -0.22
SMC6-201ENST00000351948 H3BM21 787 aa13.69□□□□□ -0.22
SMC6-201ENST00000351948 ZNF623O75123 536 aa13.69□□□□□ -0.22
SMC6-201ENST00000351948 GSTM1P09488 218 aa13.69□□□□□ -0.22
SMC6-201ENST00000351948 TSHRP16473 764 aa13.69□□□□□ -0.22
SMC6-201ENST00000351948 CCND1P24385 295 aa13.69□□□□□ -0.22
SMC6-201ENST00000351948 GKP32189 559 aa13.69□□□□□ -0.22
SMC6-201ENST00000351948 ARSIQ5FYB1 569 aa13.69□□□□□ -0.22
SMC6-201ENST00000351948 MS4A13Q5J8X5 152 aa13.69□□□□□ -0.22
SMC6-201ENST00000351948 LIPMQ5VYY2 423 aa13.69□□□□□ -0.22
SMC6-201ENST00000351948 PIWIL4Q7Z3Z4 852 aaKnown RBP13.69□□□□□ -0.22
SMC6-201ENST00000351948 ZNF438Q7Z4V0 828 aa13.69□□□□□ -0.22
SMC6-201ENST00000351948 B4GALNT2Q8NHY0 566 aa13.69□□□□□ -0.22
SMC6-201ENST00000351948 NPY6RQ99463 290 aa13.69□□□□□ -0.22
SMC6-201ENST00000351948 ZDHHC4Q9NPG8 344 aa13.69□□□□□ -0.22
SMC6-201ENST00000351948 TIMM22Q9Y584 194 aa13.69□□□□□ -0.22
SMC6-201ENST00000351948 TOGARAM1Q9Y4F4 1720 aa13.69□□□□□ -0.22
SMC6-201ENST00000351948 GRIN2DO15399 1336 aa13.69□□□□□ -0.22
SMC6-201ENST00000351948 A0A0D9SEW6 157 aa13.69□□□□□ -0.22
SMC6-201ENST00000351948 KANSL1LA0AUZ9 987 aa13.69□□□□□ -0.22
SMC6-201ENST00000351948 ZBTB22O15209 634 aa13.69□□□□□ -0.22
SMC6-201ENST00000351948 RASGRP1O95267 797 aa13.69□□□□□ -0.22
SMC6-201ENST00000351948 OCM2P0CE71 109 aa13.69□□□□□ -0.22
SMC6-201ENST00000351948 OCMP0CE72 109 aaPredicted RBP13.69□□□□□ -0.22
SMC6-201ENST00000351948 CDH2P19022 906 aaPredicted RBP13.69□□□□□ -0.22
SMC6-201ENST00000351948 MPSTP25325 297 aa13.69□□□□□ -0.22
SMC6-201ENST00000351948 ZC3H12BQ5HYM0 836 aaKnown RBP13.69□□□□□ -0.22
SMC6-201ENST00000351948 MARCH8Q5T0T0 291 aa13.69□□□□□ -0.22
SMC6-201ENST00000351948 OTUD3Q5T2D3 398 aaPredicted RBP13.69□□□□□ -0.22
SMC6-201ENST00000351948 CHST15Q7LFX5 561 aaPredicted RBP13.69□□□□□ -0.22
SMC6-201ENST00000351948 PATL1Q86TB9 770 aaKnown RBP13.69□□□□□ -0.22
SMC6-201ENST00000351948 TK2O00142 265 aa13.69□□□□□ -0.22
SMC6-201ENST00000351948 HTR7P34969 479 aa13.69□□□□□ -0.22
SMC6-201ENST00000351948 AP1S1P61966 158 aa13.69□□□□□ -0.22
SMC6-201ENST00000351948 ECT2LQ008S8 904 aa13.69□□□□□ -0.22
SMC6-201ENST00000351948 LY6G5CQ5SRR4 150 aa13.69□□□□□ -0.22
SMC6-201ENST00000351948 ACMSDQ8TDX5 336 aa13.69□□□□□ -0.22
SMC6-201ENST00000351948 HMGB4Q8WW32 186 aa13.69□□□□□ -0.22
SMC6-201ENST00000351948 PHPT1Q9NRX4 125 aaPredicted RBP13.69□□□□□ -0.22
SMC6-201ENST00000351948 KPNA5O15131 536 aa13.69□□□□□ -0.22
SMC6-201ENST00000351948 DYRK3O43781 588 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms