RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 SMIM14Q96QK8 99 aa6.92□□□□□ -1.3
TRIM55-203ENST00000350034 EBF4Q9BQW3 602 aa6.92□□□□□ -1.3
TRIM55-203ENST00000350034 CCDC106Q9BWC9 280 aa6.92□□□□□ -1.3
TRIM55-203ENST00000350034 CDH19Q9H159 772 aa6.92□□□□□ -1.3
TRIM55-203ENST00000350034 HCFC1R1Q9NWW0 138 aa6.92□□□□□ -1.3
TRIM55-203ENST00000350034 IL17CQ9P0M4 197 aa6.92□□□□□ -1.3
TRIM55-203ENST00000350034 CPSF2Q9P2I0 782 aaKnown RBP6.92□□□□□ -1.3
TRIM55-203ENST00000350034 MARCOQ9UEW3 520 aaPredicted RBP6.92□□□□□ -1.3
TRIM55-203ENST00000350034 ZMYM5Q9UJ78 669 aa6.92□□□□□ -1.3
TRIM55-203ENST00000350034 TRIM33Q9UPN9 1127 aa6.92□□□□□ -1.3
TRIM55-203ENST00000350034 HS3ST2Q9Y278 367 aa6.92□□□□□ -1.3
TRIM55-203ENST00000350034 RAP2CQ9Y3L5 183 aa6.92□□□□□ -1.3
TRIM55-203ENST00000350034 OBSL1O75147 1896 aa6.92□□□□□ -1.3
TRIM55-203ENST00000350034 KMT2BQ9UMN6 2715 aaPredicted RBP6.91□□□□□ -1.3
TRIM55-203ENST00000350034 A8MT66 165 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 MATN2O00339 956 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 GRM6O15303 877 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 GRID2O43424 1007 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 SMAD6O43541 496 aaKnown RBP6.91□□□□□ -1.3
TRIM55-203ENST00000350034 RFPL2O75678 378 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 PRAMEF12O95522 483 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 HSPA4LO95757 839 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 CYBBP04839 570 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 CHRNGP07510 517 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 KRT16P08779 473 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 CCDC166P0CW27 439 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 KITP10721 976 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 CD1DP15813 335 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 ZNF37AP17032 561 aaPredicted RBP6.91□□□□□ -1.3
TRIM55-203ENST00000350034 AOC1P19801 751 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 CALB2P22676 271 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 PTPN4P29074 926 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 WEE1P30291 646 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 HLA-FP30511 346 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 HNRNPH1P31943 449 aaKnown RBP6.91□□□□□ -1.3
TRIM55-203ENST00000350034 CA8P35219 290 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 HMGCLP35914 325 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 ABL2P42684 1182 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 GLRBP48167 497 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 KCNC1P48547 511 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 RASSF2P50749 326 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 NAGLUP54802 743 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 ADARP55265 1226 aaKnown RBP6.91□□□□□ -1.3
TRIM55-203ENST00000350034 NFKB2Q00653 900 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 ZBTB16Q05516 673 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 PRKAA1Q13131 559 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 PEX6Q13608 980 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 CSHL1Q14406 222 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 DMC1Q14565 340 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 TBCCQ15814 346 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 ZNF77Q15935 545 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 SLC5A9Q2M3M2 681 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 TTC31Q49AM3 519 aaPredicted RBP6.91□□□□□ -1.3
TRIM55-203ENST00000350034 ARHGAP15Q53QZ3 475 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 ARL13AQ5H913 290 aaPredicted RBP6.91□□□□□ -1.3
TRIM55-203ENST00000350034 PITRM1Q5JRX3 1037 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 DGKKQ5KSL6 1271 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 ATXN7L2Q5T6C5 722 aaPredicted RBP6.91□□□□□ -1.3
TRIM55-203ENST00000350034 ARMC12Q5T9G4 340 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 METTL21CQ5VZV1 264 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 ASTLQ6HA08 431 aaPredicted RBP6.91□□□□□ -1.3
TRIM55-203ENST00000350034 PDE12Q6L8Q7 609 aaKnown RBP6.91□□□□□ -1.3
TRIM55-203ENST00000350034 TPGS1Q6ZTW0 290 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 PIWIL4Q7Z3Z4 852 aaKnown RBP6.91□□□□□ -1.3
TRIM55-203ENST00000350034 KIAA0907Q7Z7F0 614 aaPredicted RBP6.91□□□□□ -1.3
TRIM55-203ENST00000350034 TREML1Q86YW5 311 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 SPNS2Q8IVW8 549 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 PLPP6Q8IY26 295 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 SPATA6LQ8N4H0 392 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 ZNF781Q8N8C0 355 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 KDM1BQ8NB78 822 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 GRIN3AQ8TCU5 1115 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 ZNF707Q96C28 371 aaPredicted RBP6.91□□□□□ -1.3
TRIM55-203ENST00000350034 EID2BQ96D98 161 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 ECHDC3Q96DC8 303 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 CCDC126Q96EE4 140 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 MYO19Q96H55 970 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 CNDP1Q96KN2 507 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 BIRC8Q96P09 236 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 TUBGCP5Q96RT8 1024 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 LYSMD1Q96S90 227 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 MIPEPQ99797 713 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 C17orf80Q9BSJ5 609 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 ILKAPQ9H0C8 392 aaPredicted RBP6.91□□□□□ -1.3
TRIM55-203ENST00000350034 SMG9Q9H0W8 520 aaKnown RBP6.91□□□□□ -1.3
TRIM55-203ENST00000350034 GPAMQ9HCL2 828 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 MAN1C1Q9NR34 630 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 KLC4Q9NSK0 619 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 POLR3BQ9NW08 1133 aaPredicted RBP6.91□□□□□ -1.3
TRIM55-203ENST00000350034 ZDHHC7Q9NXF8 308 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 MARK1Q9P0L2 795 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 TBC1D14Q9P2M4 693 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 FKBPLQ9UIM3 349 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 APOBEC2Q9Y235 224 aaKnown RBP6.91□□□□□ -1.3
TRIM55-203ENST00000350034 CCL26Q9Y258 94 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 CRYL1Q9Y2S2 319 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 PPIL1Q9Y3C6 166 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 ZNF711Q9Y462 761 aa6.91□□□□□ -1.3
TRIM55-203ENST00000350034 OAS3Q9Y6K5 1087 aaKnown RBP6.91□□□□□ -1.3
TRIM55-203ENST00000350034 A0A0J9YYE9 177 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms