RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 RALGPS1Q5JS13 557 aa20.34■□□□□ 0.85
CHRNA3-202ENST00000348639 C6orf163Q5TEZ5 329 aa20.34■□□□□ 0.85
CHRNA3-202ENST00000348639 FRMD7Q6ZUT3 714 aa20.34■□□□□ 0.85
CHRNA3-202ENST00000348639 MAB21L3Q8N8X9 362 aa20.34■□□□□ 0.85
CHRNA3-202ENST00000348639 DCAF4L2Q8NA75 395 aa20.34■□□□□ 0.85
CHRNA3-202ENST00000348639 LPGAT1Q92604 370 aa20.34■□□□□ 0.85
CHRNA3-202ENST00000348639 PTERQ96BW5 349 aa20.34■□□□□ 0.85
CHRNA3-202ENST00000348639 L3HYPDHQ96EM0 354 aa20.34■□□□□ 0.85
CHRNA3-202ENST00000348639 MAELQ96JY0 434 aaKnown RBP20.34■□□□□ 0.85
CHRNA3-202ENST00000348639 SMIM14Q96QK8 99 aa20.34■□□□□ 0.85
CHRNA3-202ENST00000348639 ZBED2Q9BTP6 218 aa20.34■□□□□ 0.85
CHRNA3-202ENST00000348639 TRMOQ9BU70 441 aa20.34■□□□□ 0.85
CHRNA3-202ENST00000348639 ZNF385DQ9H6B1 395 aa20.34■□□□□ 0.85
CHRNA3-202ENST00000348639 GTSE1Q9NYZ3 720 aa20.34■□□□□ 0.85
CHRNA3-202ENST00000348639 DNMT3BQ9UBC3 853 aaKnown RBP20.34■□□□□ 0.85
CHRNA3-202ENST00000348639 VPS51Q9UID3 782 aa20.34■□□□□ 0.85
CHRNA3-202ENST00000348639 SSX2IPQ9Y2D8 614 aa20.34■□□□□ 0.85
CHRNA3-202ENST00000348639 TMEM233B4DJY2 109 aa20.33■□□□□ 0.85
CHRNA3-202ENST00000348639 BAIAP3O94812 1187 aa20.33■□□□□ 0.85
CHRNA3-202ENST00000348639 PSMG1O95456 288 aa20.33■□□□□ 0.85
CHRNA3-202ENST00000348639 CSKP41240 450 aa20.33■□□□□ 0.85
CHRNA3-202ENST00000348639 PLK1P53350 603 aa20.33■□□□□ 0.85
CHRNA3-202ENST00000348639 RHOAP61586 193 aa20.33■□□□□ 0.85
CHRNA3-202ENST00000348639 SULT2A1Q06520 285 aa20.33■□□□□ 0.85
CHRNA3-202ENST00000348639 PDAP1Q13442 181 aaKnown RBP20.33■□□□□ 0.85
CHRNA3-202ENST00000348639 GAREM2Q75VX8 874 aa20.33■□□□□ 0.85
CHRNA3-202ENST00000348639 NECAB2Q7Z6G3 386 aa20.33■□□□□ 0.85
CHRNA3-202ENST00000348639 MRPS31Q92665 395 aaKnown RBP20.33■□□□□ 0.85
CHRNA3-202ENST00000348639 STMN2Q93045 179 aa20.33■□□□□ 0.85
CHRNA3-202ENST00000348639 LENG8Q96PV6 779 aaPredicted RBP20.33■□□□□ 0.85
CHRNA3-202ENST00000348639 RTKNQ9BST9 563 aa20.33■□□□□ 0.85
CHRNA3-202ENST00000348639 LSM7Q9UK45 103 aaKnown RBP20.33■□□□□ 0.85
CHRNA3-202ENST00000348639 UBA6A0AVT1 1052 aaPredicted RBP20.32■□□□□ 0.84
CHRNA3-202ENST00000348639 NDUFS3O75489 264 aa20.32■□□□□ 0.84
CHRNA3-202ENST00000348639 LRG1P02750 347 aa20.32■□□□□ 0.84
CHRNA3-202ENST00000348639 CKMP06732 381 aa20.32■□□□□ 0.84
CHRNA3-202ENST00000348639 CTSAP10619 480 aa20.32■□□□□ 0.84
CHRNA3-202ENST00000348639 THRAP10827 490 aa20.32■□□□□ 0.84
CHRNA3-202ENST00000348639 PPARGP37231 505 aaPredicted RBP20.32■□□□□ 0.84
CHRNA3-202ENST00000348639 ABL2P42684 1182 aa20.32■□□□□ 0.84
CHRNA3-202ENST00000348639 RCN1Q15293 331 aa20.32■□□□□ 0.84
CHRNA3-202ENST00000348639 HS6ST3Q8IZP7 471 aa20.32■□□□□ 0.84
CHRNA3-202ENST00000348639 AFAP1L2Q8N4X5 818 aa20.32■□□□□ 0.84
CHRNA3-202ENST00000348639 FIBCD1Q8N539 461 aa20.32■□□□□ 0.84
CHRNA3-202ENST00000348639 RHEBL1Q8TAI7 183 aa20.32■□□□□ 0.84
CHRNA3-202ENST00000348639 WFDC5Q8TCV5 224 aa20.32■□□□□ 0.84
CHRNA3-202ENST00000348639 ACTRT2Q8TDY3 377 aa20.32■□□□□ 0.84
CHRNA3-202ENST00000348639 POLR3BQ9NW08 1133 aaPredicted RBP20.32■□□□□ 0.84
CHRNA3-202ENST00000348639 HACD3Q9P035 362 aa20.32■□□□□ 0.84
CHRNA3-202ENST00000348639 ARHGAP26Q9UNA1 814 aa20.32■□□□□ 0.84
CHRNA3-202ENST00000348639 VPS9D1Q9Y2B5 631 aa20.32■□□□□ 0.84
CHRNA3-202ENST00000348639 LAMA3Q16787 3333 aa20.32■□□□□ 0.84
CHRNA3-202ENST00000348639 SMIM24O75264 130 aa20.32■□□□□ 0.84
CHRNA3-202ENST00000348639 KRT36O76013 467 aa20.32■□□□□ 0.84
CHRNA3-202ENST00000348639 PIK3R1P27986 724 aa20.32■□□□□ 0.84
CHRNA3-202ENST00000348639 ACTR3P61158 418 aa20.32■□□□□ 0.84
CHRNA3-202ENST00000348639 SATB1Q01826 763 aa20.32■□□□□ 0.84
CHRNA3-202ENST00000348639 ZNF678Q5SXM1 525 aa20.32■□□□□ 0.84
CHRNA3-202ENST00000348639 NXNQ6DKJ4 435 aa20.32■□□□□ 0.84
CHRNA3-202ENST00000348639 CUZD1Q86UP6 607 aa20.32■□□□□ 0.84
CHRNA3-202ENST00000348639 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.32■□□□□ 0.84
CHRNA3-202ENST00000348639 TTC30BQ8N4P2 665 aa20.32■□□□□ 0.84
CHRNA3-202ENST00000348639 KLHL23Q8NBE8 558 aa20.32■□□□□ 0.84
CHRNA3-202ENST00000348639 ARMC5Q96C12 935 aa20.32■□□□□ 0.84
CHRNA3-202ENST00000348639 PANX3Q96QZ0 392 aa20.32■□□□□ 0.84
CHRNA3-202ENST00000348639 TACO1Q9BSH4 297 aaKnown RBP20.32■□□□□ 0.84
CHRNA3-202ENST00000348639 GSTO2Q9H4Y5 243 aa20.32■□□□□ 0.84
CHRNA3-202ENST00000348639 SYTL2Q9HCH5 934 aa20.32■□□□□ 0.84
CHRNA3-202ENST00000348639 TAS2R13Q9NYV9 303 aa20.32■□□□□ 0.84
CHRNA3-202ENST00000348639 FCF1Q9Y324 198 aaKnown RBP20.32■□□□□ 0.84
CHRNA3-202ENST00000348639 KIAA1671Q9BY89 1806 aa20.32■□□□□ 0.84
CHRNA3-202ENST00000348639 OBSL1O75147 1896 aa20.32■□□□□ 0.84
CHRNA3-202ENST00000348639 RGSL1A5PLK6 1076 aa20.31■□□□□ 0.84
CHRNA3-202ENST00000348639 SDHDO14521 159 aa20.31■□□□□ 0.84
CHRNA3-202ENST00000348639 FZD6O60353 706 aa20.31■□□□□ 0.84
CHRNA3-202ENST00000348639 CXCL14O95715 111 aa20.31■□□□□ 0.84
CHRNA3-202ENST00000348639 FMO4P31512 558 aa20.31■□□□□ 0.84
CHRNA3-202ENST00000348639 SLC7A9P82251 487 aa20.31■□□□□ 0.84
CHRNA3-202ENST00000348639 BTKQ06187 659 aa20.31■□□□□ 0.84
CHRNA3-202ENST00000348639 RIPOR1Q6ZS17 1223 aa20.31■□□□□ 0.84
CHRNA3-202ENST00000348639 HTR3DQ70Z44 454 aa20.31■□□□□ 0.84
CHRNA3-202ENST00000348639 MFN1Q8IWA4 741 aa20.31■□□□□ 0.84
CHRNA3-202ENST00000348639 KIRREL3Q8IZU9 778 aa20.31■□□□□ 0.84
CHRNA3-202ENST00000348639 EFHBQ8N7U6 833 aa20.31■□□□□ 0.84
CHRNA3-202ENST00000348639 KCNV2Q8TDN2 545 aa20.31■□□□□ 0.84
CHRNA3-202ENST00000348639 ANKRD27Q96NW4 1050 aa20.31■□□□□ 0.84
CHRNA3-202ENST00000348639 CCDC68Q9H2F9 335 aa20.31■□□□□ 0.84
CHRNA3-202ENST00000348639 TFB2MQ9H5Q4 396 aaKnown RBP20.31■□□□□ 0.84
CHRNA3-202ENST00000348639 IL23AQ9NPF7 189 aa20.31■□□□□ 0.84
CHRNA3-202ENST00000348639 STOML1Q9UBI4 398 aa20.31■□□□□ 0.84
CHRNA3-202ENST00000348639 ZNF510Q9Y2H8 683 aa20.31■□□□□ 0.84
CHRNA3-202ENST00000348639 H7C0S8 307 aa20.31■□□□□ 0.84
CHRNA3-202ENST00000348639 STX7O15400 261 aaKnown RBP20.31■□□□□ 0.84
CHRNA3-202ENST00000348639 SRP72O76094 671 aaKnown RBP20.31■□□□□ 0.84
CHRNA3-202ENST00000348639 RHOBTB1O94844 696 aa20.31■□□□□ 0.84
CHRNA3-202ENST00000348639 GJA1P17302 382 aa20.31■□□□□ 0.84
CHRNA3-202ENST00000348639 ITGAXP20702 1163 aa20.31■□□□□ 0.84
CHRNA3-202ENST00000348639 GCKP35557 465 aa20.31■□□□□ 0.84
CHRNA3-202ENST00000348639 PTDSS1P48651 473 aaKnown RBP20.31■□□□□ 0.84
CHRNA3-202ENST00000348639 HERVK_113P63132 956 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms