RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 TRIM42Q8IWZ5 723 aa18.66■□□□□ 0.58
PTN-201ENST00000348225 CCDC63Q8NA47 563 aa18.66■□□□□ 0.58
PTN-201ENST00000348225 SMRP1Q8NCR6 262 aa18.66■□□□□ 0.58
PTN-201ENST00000348225 ARMC2Q8NEN0 867 aa18.66■□□□□ 0.58
PTN-201ENST00000348225 ACVR1CQ8NER5 493 aa18.66■□□□□ 0.58
PTN-201ENST00000348225 FAM45AQ8TCE6 357 aa18.66■□□□□ 0.58
PTN-201ENST00000348225 KLHL32Q96NJ5 620 aa18.66■□□□□ 0.58
PTN-201ENST00000348225 MCCC1Q96RQ3 725 aaPredicted RBP18.66■□□□□ 0.58
PTN-201ENST00000348225 BPIFA1Q9NP55 256 aa18.66■□□□□ 0.58
PTN-201ENST00000348225 GTSE1Q9NYZ3 720 aa18.66■□□□□ 0.58
PTN-201ENST00000348225 EPS15L1Q9UBC2 864 aa18.66■□□□□ 0.58
PTN-201ENST00000348225 COL6A2P12110 1019 aa18.65■□□□□ 0.58
PTN-201ENST00000348225 IGFBP4P22692 258 aa18.65■□□□□ 0.58
PTN-201ENST00000348225 SP100P23497 879 aaPredicted RBP18.65■□□□□ 0.58
PTN-201ENST00000348225 OPRD1P41143 372 aa18.65■□□□□ 0.58
PTN-201ENST00000348225 DBN1Q16643 649 aa18.65■□□□□ 0.58
PTN-201ENST00000348225 ZNF789Q5FWF6 425 aa18.65■□□□□ 0.58
PTN-201ENST00000348225 NUDT18Q6ZVK8 323 aa18.65■□□□□ 0.58
PTN-201ENST00000348225 MICALCLQ6ZW33 695 aa18.65■□□□□ 0.58
PTN-201ENST00000348225 CCDC91Q7Z6B0 441 aa18.65■□□□□ 0.58
PTN-201ENST00000348225 CLEC14AQ86T13 490 aa18.65■□□□□ 0.58
PTN-201ENST00000348225 LDB1Q86U70 411 aaPredicted RBP18.65■□□□□ 0.58
PTN-201ENST00000348225 PHTF2Q8N3S3 785 aa18.65■□□□□ 0.58
PTN-201ENST00000348225 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.65■□□□□ 0.58
PTN-201ENST00000348225 OMDQ99983 421 aa18.65■□□□□ 0.58
PTN-201ENST00000348225 SLC30A1Q9Y6M5 507 aa18.65■□□□□ 0.58
PTN-201ENST00000348225 WASF2Q9Y6W5 498 aa18.65■□□□□ 0.58
PTN-201ENST00000348225 REV3LO60673 3130 aa18.65■□□□□ 0.58
PTN-201ENST00000348225 MUC22E2RYF6 1773 aaPredicted RBP18.64■□□□□ 0.58
PTN-201ENST00000348225 A0A087X1B8 175 aa18.64■□□□□ 0.57
PTN-201ENST00000348225 WDR91A4D1P6 747 aa18.64■□□□□ 0.57
PTN-201ENST00000348225 TBC1D3BA6NDS4 549 aa18.64■□□□□ 0.57
PTN-201ENST00000348225 LEFTY1O75610 366 aa18.64■□□□□ 0.57
PTN-201ENST00000348225 TTPAP49638 278 aa18.64■□□□□ 0.57
PTN-201ENST00000348225 TAS2R39P59534 338 aa18.64■□□□□ 0.57
PTN-201ENST00000348225 ADGRE1Q14246 886 aa18.64■□□□□ 0.57
PTN-201ENST00000348225 SEMA3AQ14563 771 aa18.64■□□□□ 0.57
PTN-201ENST00000348225 CDKN3Q16667 212 aa18.64■□□□□ 0.57
PTN-201ENST00000348225 ZRANB3Q5FWF4 1079 aa18.64■□□□□ 0.57
PTN-201ENST00000348225 ARSIQ5FYB1 569 aa18.64■□□□□ 0.57
PTN-201ENST00000348225 HECTD2Q5U5R9 776 aa18.64■□□□□ 0.57
PTN-201ENST00000348225 TTC8Q8TAM2 541 aa18.64■□□□□ 0.57
PTN-201ENST00000348225 HCAR2Q8TDS4 363 aa18.64■□□□□ 0.57
PTN-201ENST00000348225 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.64■□□□□ 0.57
PTN-201ENST00000348225 CD207Q9UJ71 328 aa18.64■□□□□ 0.57
PTN-201ENST00000348225 APPL1Q9UKG1 709 aa18.64■□□□□ 0.57
PTN-201ENST00000348225 ACOT9Q9Y305 439 aa18.64■□□□□ 0.57
PTN-201ENST00000348225 ZNF106Q9H2Y7 1883 aaKnown RBP18.64■□□□□ 0.57
PTN-201ENST00000348225 SCN8AQ9UQD0 1980 aa18.64■□□□□ 0.57
PTN-201ENST00000348225 EDDM13A0A1B0GTR0 161 aa18.63■□□□□ 0.57
PTN-201ENST00000348225 TSPAN11A1L157 253 aa18.63■□□□□ 0.57
PTN-201ENST00000348225 NPIPB15A6NHN6 443 aaPredicted RBP18.63■□□□□ 0.57
PTN-201ENST00000348225 BIRC5O15392 142 aa18.63■□□□□ 0.57
PTN-201ENST00000348225 PHGDHO43175 533 aaKnown RBP18.63■□□□□ 0.57
PTN-201ENST00000348225 PLIN3O60664 434 aa18.63■□□□□ 0.57
PTN-201ENST00000348225 NDUFS3O75489 264 aa18.63■□□□□ 0.57
PTN-201ENST00000348225 CLDN7O95471 211 aa18.63■□□□□ 0.57
PTN-201ENST00000348225 TOP3BO95985 862 aaKnown RBP18.63■□□□□ 0.57
PTN-201ENST00000348225 APOA4P06727 396 aa18.63■□□□□ 0.57
PTN-201ENST00000348225 SLC35E2BP0CK96 405 aa18.63■□□□□ 0.57
PTN-201ENST00000348225 CACNG1Q06432 222 aa18.63■□□□□ 0.57
PTN-201ENST00000348225 MESP2Q0VG99 397 aa18.63■□□□□ 0.57
PTN-201ENST00000348225 PEX6Q13608 980 aa18.63■□□□□ 0.57
PTN-201ENST00000348225 RBM20Q5T481 1227 aaKnown RBP18.63■□□□□ 0.57
PTN-201ENST00000348225 GKAP1Q5VSY0 366 aaPredicted RBP18.63■□□□□ 0.57
PTN-201ENST00000348225 MICALL1Q8N3F8 863 aa18.63■□□□□ 0.57
PTN-201ENST00000348225 ZNF75CPQ92670 426 aaPredicted RBP18.63■□□□□ 0.57
PTN-201ENST00000348225 NDNQ99608 321 aa18.63■□□□□ 0.57
PTN-201ENST00000348225 BRD9Q9H8M2 597 aa18.63■□□□□ 0.57
PTN-201ENST00000348225 MID2Q9UJV3 735 aa18.63■□□□□ 0.57
PTN-201ENST00000348225 EMCNQ9ULC0 261 aa18.63■□□□□ 0.57
PTN-201ENST00000348225 VWA7Q9Y334 891 aa18.63■□□□□ 0.57
PTN-201ENST00000348225 PROCP04070 461 aa18.63■□□□□ 0.57
PTN-201ENST00000348225 CYP2A6P11509 494 aaPredicted RBP18.63■□□□□ 0.57
PTN-201ENST00000348225 KPNA2P52292 529 aaKnown RBP18.63■□□□□ 0.57
PTN-201ENST00000348225 PTPN5P54829 565 aa18.63■□□□□ 0.57
PTN-201ENST00000348225 XIAPP98170 497 aa18.63■□□□□ 0.57
PTN-201ENST00000348225 IRF9Q00978 393 aa18.63■□□□□ 0.57
PTN-201ENST00000348225 E2F5Q15329 346 aa18.63■□□□□ 0.57
PTN-201ENST00000348225 TSNAXIP1Q2TAA8 658 aa18.63■□□□□ 0.57
PTN-201ENST00000348225 HNRNPA1L2Q32P51 320 aaKnown RBP18.63■□□□□ 0.57
PTN-201ENST00000348225 ZNF805Q5CZA5 627 aa18.63■□□□□ 0.57
PTN-201ENST00000348225 C16orf46Q6P387 395 aa18.63■□□□□ 0.57
PTN-201ENST00000348225 CRTC1Q6UUV9 634 aa18.63■□□□□ 0.57
PTN-201ENST00000348225 TBC1D1Q86TI0 1168 aaPredicted RBP18.63■□□□□ 0.57
PTN-201ENST00000348225 CEP97Q8IW35 865 aa18.63■□□□□ 0.57
PTN-201ENST00000348225 CBARPQ8N350 705 aaPredicted RBP18.63■□□□□ 0.57
PTN-201ENST00000348225 RAB3IL1Q8TBN0 382 aa18.63■□□□□ 0.57
PTN-201ENST00000348225 EID2BQ96D98 161 aa18.63■□□□□ 0.57
PTN-201ENST00000348225 CCDC68Q9H2F9 335 aa18.63■□□□□ 0.57
PTN-201ENST00000348225 MANSC1Q9H8J5 431 aa18.63■□□□□ 0.57
PTN-201ENST00000348225 FGFR1OP2Q9NVK5 253 aa18.63■□□□□ 0.57
PTN-201ENST00000348225 TMEM216Q9P0N5 145 aa18.63■□□□□ 0.57
PTN-201ENST00000348225 DKK3Q9UBP4 350 aa18.63■□□□□ 0.57
PTN-201ENST00000348225 FNDC3AQ9Y2H6 1198 aaKnown RBP18.63■□□□□ 0.57
PTN-201ENST00000348225 CRYL1Q9Y2S2 319 aa18.63■□□□□ 0.57
PTN-201ENST00000348225 USP15Q9Y4E8 981 aaPredicted RBP18.63■□□□□ 0.57
PTN-201ENST00000348225 NUMBLQ9Y6R0 609 aa18.63■□□□□ 0.57
PTN-201ENST00000348225 A0A0U1RQS6 177 aa18.62■□□□□ 0.57
PTN-201ENST00000348225 KAT7O95251 611 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms