RNA–Protein interactions for RNA: ENST00000347691.9

TRAPPC6B-202, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6B, Length 3,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-202ENST00000347691 FAM49AQ9H0Q0 323 aaPredicted RBP10.12□□□□□ -0.79
TRAPPC6B-202ENST00000347691 SLC25A51Q9H1U9 297 aa10.12□□□□□ -0.79
TRAPPC6B-202ENST00000347691 MFSD1Q9H3U5 465 aa10.12□□□□□ -0.79
TRAPPC6B-202ENST00000347691 RBM22Q9NW64 420 aaKnown RBP eCLIP10.12□□□□□ -0.79
TRAPPC6B-202ENST00000347691 CDH9Q9ULB4 789 aa10.12□□□□□ -0.79
TRAPPC6B-202ENST00000347691 GRXCR2A6NFK2 248 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 UBXN8O00124 270 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 EI24O14681 340 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 MAFKO60675 156 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 BCL10O95999 233 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 PLK1P53350 603 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 EPS8Q12929 822 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 UGT3A2Q3SY77 523 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 AARS2Q5JTZ9 985 aaKnown RBP10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 KANK2Q63ZY3 851 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 DCDC5Q6ZRR9 648 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 USP51Q70EK9 711 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 CILP2Q8IUL8 1156 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 TWIST2Q8WVJ9 160 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 MRGPRX2Q96LB1 330 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 SLC39A3Q9BRY0 314 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 ALG9Q9H6U8 611 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 TXNRD2Q9NNW7 524 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 TNFRSF12AQ9NP84 129 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 CMTM6Q9NX76 183 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 KLK14Q9P0G3 267 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 ZNF639Q9UID6 485 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 GJD2Q9UKL4 321 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 PCDHA9Q9Y5H5 950 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 SOBPA7XYQ1 873 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 ACOX3O15254 700 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 INPP4BO15327 924 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 UGT1A6P19224 532 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 UGT1A1P22309 533 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 UGT1A4P22310 534 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 PCSK1P29120 753 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 UGT1A3P35503 534 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 UGT1A5P35504 534 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 VPS26BQ4G0F5 336 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 CYBRD1Q53TN4 286 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 RBM48Q5RL73 367 aaKnown RBP10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 OGFOD2Q6N063 350 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 FAM117BQ6P1L5 589 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 BLOC1S3Q6QNY0 202 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 FRA10AC1Q70Z53 315 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 ARHGAP12Q8IWW6 846 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 RHEBL1Q8TAI7 183 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 RDH12Q96NR8 316 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 OSMRQ99650 979 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 ALG2Q9H553 416 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 IL1RL2Q9HB29 575 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 GPRC5DQ9NZD1 345 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 LEF1Q9UJU2 399 aaPredicted RBP10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 BLOC1S6Q9UL45 172 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 TDRKHQ9Y2W6 561 aaKnown RBP10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 HEMK1Q9Y5R4 338 aaPredicted RBP10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 A0A1W2PP18 115 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 TMEM221A6NGB7 291 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 UBFD1O14562 309 aaKnown RBP10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 TULP3O75386 442 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 SUPT3HO75486 399 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 DNAJB5O75953 348 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 WISP3O95389 354 aaPredicted RBP10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 ZBTB11O95625 1053 aaPredicted RBP10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 HLA-DQB2P05538 268 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 INHBBP09529 407 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 CAPN3P20807 821 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 WNT3AP56704 352 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 SOX4Q06945 474 aaPredicted RBP10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 NFYCQ13952 458 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 RGS21Q2M5E4 152 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 Q3C1V9 767 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 PITRM1Q5JRX3 1037 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 ZNF467Q7Z7K2 595 aaPredicted RBP10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 ISCA2Q86U28 154 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 TAC4Q86UU9 113 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 OR13F1Q8NGS4 319 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 DQX1Q8TE96 717 aaKnown RBP10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 PEX13Q92968 403 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 FATE1Q969F0 183 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 TUBGCP3Q96CW5 907 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 NUSAP1Q9BXS6 441 aaKnown RBP10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 GPN2Q9H9Y4 310 aaPredicted RBP10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 MID1IP1Q9NPA3 183 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 CRTAC1Q9NQ79 661 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 EGFL7Q9UHF1 273 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 CLEC11AQ9Y240 323 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 MYLKQ15746 1914 aa10.11□□□□□ -0.79
TRAPPC6B-202ENST00000347691 PAPPA2Q9BXP8 1791 aa10.1□□□□□ -0.79
TRAPPC6B-202ENST00000347691 ATP6AP2A0A1C7CYW4 349 aa10.1□□□□□ -0.79
TRAPPC6B-202ENST00000347691 A0A1W2PPW3 197 aa10.1□□□□□ -0.79
TRAPPC6B-202ENST00000347691 CFAP99D6REC4 459 aa10.1□□□□□ -0.79
TRAPPC6B-202ENST00000347691 FXYD1O00168 92 aa10.1□□□□□ -0.79
TRAPPC6B-202ENST00000347691 TPST1O60507 370 aa10.1□□□□□ -0.79
TRAPPC6B-202ENST00000347691 CRCPO75575 148 aa10.1□□□□□ -0.79
TRAPPC6B-202ENST00000347691 ATP6AP2O75787 350 aa10.1□□□□□ -0.79
TRAPPC6B-202ENST00000347691 CHEK2O96017 543 aa10.1□□□□□ -0.79
TRAPPC6B-202ENST00000347691 MMP3P08254 477 aa10.1□□□□□ -0.79
TRAPPC6B-202ENST00000347691 MBL2P11226 248 aaPredicted RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms