RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 DSELQ8IZU8 1212 aa19.37■□□□□ 0.69
HDAC4-201ENST00000345617 C1GALT1C1Q96EU7 318 aa19.37■□□□□ 0.69
HDAC4-201ENST00000345617 DDX43Q9NXZ2 648 aaKnown RBP19.37■□□□□ 0.69
HDAC4-201ENST00000345617 TDRKHQ9Y2W6 561 aaKnown RBP19.37■□□□□ 0.69
HDAC4-201ENST00000345617 CCNDBP1O95273 360 aa19.37■□□□□ 0.69
HDAC4-201ENST00000345617 CYP4B1P13584 511 aa19.37■□□□□ 0.69
HDAC4-201ENST00000345617 TOB1P50616 345 aaPredicted RBP19.37■□□□□ 0.69
HDAC4-201ENST00000345617 CCNYL2Q5T2Q4 361 aa19.37■□□□□ 0.69
HDAC4-201ENST00000345617 AXIN2Q9Y2T1 843 aa19.37■□□□□ 0.69
HDAC4-201ENST00000345617 RB1P06400 928 aa19.37■□□□□ 0.69
HDAC4-201ENST00000345617 LTKP29376 864 aa19.37■□□□□ 0.69
HDAC4-201ENST00000345617 ADNP2Q6IQ32 1131 aa19.37■□□□□ 0.69
HDAC4-201ENST00000345617 CETPP11597 493 aa19.36■□□□□ 0.69
HDAC4-201ENST00000345617 PHB2Q99623 299 aa19.36■□□□□ 0.69
HDAC4-201ENST00000345617 DEPDC5O75140 1603 aa19.36■□□□□ 0.69
HDAC4-201ENST00000345617 CTSHP09668 335 aa19.36■□□□□ 0.69
HDAC4-201ENST00000345617 TXNRD3Q86VQ6 643 aa19.36■□□□□ 0.69
HDAC4-201ENST00000345617 ANGPTL1O95841 491 aa19.36■□□□□ 0.69
HDAC4-201ENST00000345617 DNAJB8Q8NHS0 232 aa19.36■□□□□ 0.69
HDAC4-201ENST00000345617 IPCEF1Q8WWN9 437 aaPredicted RBP19.36■□□□□ 0.69
HDAC4-201ENST00000345617 ABCC13Q9NSE7 274 aa19.36■□□□□ 0.69
HDAC4-201ENST00000345617 ZNF780BQ9Y6R6 833 aa19.36■□□□□ 0.69
HDAC4-201ENST00000345617 YES1P07947 543 aa19.36■□□□□ 0.69
HDAC4-201ENST00000345617 ZNF234Q14588 700 aa19.36■□□□□ 0.69
HDAC4-201ENST00000345617 FSTL5Q8N475 847 aaPredicted RBP19.36■□□□□ 0.69
HDAC4-201ENST00000345617 EHD4Q9H223 541 aa19.36■□□□□ 0.69
HDAC4-201ENST00000345617 INTS10Q9NVR2 710 aaKnown RBP19.36■□□□□ 0.69
HDAC4-201ENST00000345617 GPR75-ASB3A0A0A6YYF3 556 aa19.36■□□□□ 0.69
HDAC4-201ENST00000345617 PAPSS2O95340 614 aaPredicted RBP19.36■□□□□ 0.69
HDAC4-201ENST00000345617 SLC34A3Q8N130 599 aa19.36■□□□□ 0.69
HDAC4-201ENST00000345617 MARK1Q9P0L2 795 aa19.36■□□□□ 0.69
HDAC4-201ENST00000345617 ADGRE2Q9UHX3 823 aa19.36■□□□□ 0.69
HDAC4-201ENST00000345617 ROBO3Q96MS0 1386 aa19.36■□□□□ 0.69
HDAC4-201ENST00000345617 PET100P0DJ07 73 aa19.36■□□□□ 0.69
HDAC4-201ENST00000345617 RTL4Q6ZR62 310 aa19.36■□□□□ 0.69
HDAC4-201ENST00000345617 ERI1Q8IV48 349 aaKnown RBP19.36■□□□□ 0.69
HDAC4-201ENST00000345617 RCN3Q96D15 328 aa19.36■□□□□ 0.69
HDAC4-201ENST00000345617 MARCH7Q9H992 704 aa19.36■□□□□ 0.69
HDAC4-201ENST00000345617 CDC25CP30307 473 aa19.36■□□□□ 0.69
HDAC4-201ENST00000345617 FAM151AQ8WW52 585 aa19.36■□□□□ 0.69
HDAC4-201ENST00000345617 EBNA1BP2Q99848 306 aaKnown RBP19.36■□□□□ 0.69
HDAC4-201ENST00000345617 TULP2O00295 520 aa19.35■□□□□ 0.69
HDAC4-201ENST00000345617 SCARF1Q14162 830 aa19.35■□□□□ 0.69
HDAC4-201ENST00000345617 TMEM119Q4V9L6 283 aa19.35■□□□□ 0.69
HDAC4-201ENST00000345617 OR4A15Q8NGL6 344 aa19.35■□□□□ 0.69
HDAC4-201ENST00000345617 ITFG2Q969R8 447 aa19.35■□□□□ 0.69
HDAC4-201ENST00000345617 FAM124BQ9H5Z6 455 aaPredicted RBP19.35■□□□□ 0.69
HDAC4-201ENST00000345617 PPP4CP60510 307 aa19.35■□□□□ 0.69
HDAC4-201ENST00000345617 TEAD4Q15561 434 aa19.35■□□□□ 0.69
HDAC4-201ENST00000345617 DDX59Q5T1V6 619 aaKnown RBP eCLIP19.35■□□□□ 0.691e-7■■■■□ 25.7
HDAC4-201ENST00000345617 BEND5Q7L4P6 421 aa19.35■□□□□ 0.69
HDAC4-201ENST00000345617 TRABD2AQ86V40 505 aa19.35■□□□□ 0.69
HDAC4-201ENST00000345617 NXNL1Q96CM4 212 aa19.35■□□□□ 0.69
HDAC4-201ENST00000345617 ATP13A3Q9H7F0 1226 aa19.35■□□□□ 0.69
HDAC4-201ENST00000345617 OAS3Q9Y6K5 1087 aaKnown RBP19.35■□□□□ 0.69
HDAC4-201ENST00000345617 SLC12A8A0AV02 714 aa19.35■□□□□ 0.69
HDAC4-201ENST00000345617 EDF1O60869 148 aaKnown RBP19.35■□□□□ 0.69
HDAC4-201ENST00000345617 SHBGP04278 402 aa19.35■□□□□ 0.69
HDAC4-201ENST00000345617 FGF1P05230 155 aa19.35■□□□□ 0.69
HDAC4-201ENST00000345617 FABP3P05413 133 aa19.35■□□□□ 0.69
HDAC4-201ENST00000345617 PHC1P78364 1004 aa19.35■□□□□ 0.69
HDAC4-201ENST00000345617 CPSF7Q8N684 471 aaKnown RBP19.35■□□□□ 0.69
HDAC4-201ENST00000345617 XKRYO14609 159 aa19.35■□□□□ 0.69
HDAC4-201ENST00000345617 GNASQ5JWF2 1037 aa19.35■□□□□ 0.69
HDAC4-201ENST00000345617 KANTRA0A1W2PQU2 76 aa19.35■□□□□ 0.69
HDAC4-201ENST00000345617 TCRBV9S1A1TA0A576 114 aa19.35■□□□□ 0.69
HDAC4-201ENST00000345617 CABYRO75952 493 aa19.35■□□□□ 0.69
HDAC4-201ENST00000345617 IRF8Q02556 426 aa19.35■□□□□ 0.69
HDAC4-201ENST00000345617 FAM205AQ6ZU69 1335 aa19.35■□□□□ 0.69
HDAC4-201ENST00000345617 PPP2R2BQ00005 443 aa19.35■□□□□ 0.69
HDAC4-201ENST00000345617 KLHL22Q53GT1 634 aa19.35■□□□□ 0.69
HDAC4-201ENST00000345617 ZNF613Q6PF04 617 aa19.35■□□□□ 0.69
HDAC4-201ENST00000345617 ALG2Q9H553 416 aa19.35■□□□□ 0.69
HDAC4-201ENST00000345617 IQCMA0A1B0GVH7 501 aa19.35■□□□□ 0.69
HDAC4-201ENST00000345617 CCNB1P14635 433 aa19.35■□□□□ 0.69
HDAC4-201ENST00000345617 CCNHP51946 323 aaPredicted RBP19.35■□□□□ 0.69
HDAC4-201ENST00000345617 IFT46Q9NQC8 304 aa19.35■□□□□ 0.69
HDAC4-201ENST00000345617 FBXO6Q9NRD1 293 aaPredicted RBP19.35■□□□□ 0.69
HDAC4-201ENST00000345617 LTN1O94822 1766 aa19.34■□□□□ 0.69
HDAC4-201ENST00000345617 ALDH4A1P30038 563 aa19.34■□□□□ 0.69
HDAC4-201ENST00000345617 AGO4Q9HCK5 861 aaKnown RBP19.34■□□□□ 0.69
HDAC4-201ENST00000345617 CYP27B1O15528 508 aa19.34■□□□□ 0.69
HDAC4-201ENST00000345617 ATP6V1G1O75348 118 aa19.34■□□□□ 0.69
HDAC4-201ENST00000345617 FAM71AQ8IYT1 594 aa19.34■□□□□ 0.69
HDAC4-201ENST00000345617 DQX1Q8TE96 717 aaKnown RBP19.34■□□□□ 0.69
HDAC4-201ENST00000345617 FATE1Q969F0 183 aa19.34■□□□□ 0.69
HDAC4-201ENST00000345617 ACAT2Q9BWD1 397 aa19.34■□□□□ 0.69
HDAC4-201ENST00000345617 RHOJQ9H4E5 214 aa19.34■□□□□ 0.69
HDAC4-201ENST00000345617 FETUBQ9UGM5 382 aa19.34■□□□□ 0.69
HDAC4-201ENST00000345617 CNTNAP2Q9UHC6 1331 aa19.34■□□□□ 0.69
HDAC4-201ENST00000345617 MAZP56270 477 aaKnown RBP19.34■□□□□ 0.69
HDAC4-201ENST00000345617 GRM3Q14832 879 aa19.34■□□□□ 0.69
HDAC4-201ENST00000345617 THRSPQ92748 146 aa19.34■□□□□ 0.69
HDAC4-201ENST00000345617 PDE10AQ9Y233 779 aa19.34■□□□□ 0.69
HDAC4-201ENST00000345617 PRKD3O94806 890 aa19.34■□□□□ 0.69
HDAC4-201ENST00000345617 AP2A2O94973 939 aa19.34■□□□□ 0.69
HDAC4-201ENST00000345617 RHEBQ15382 184 aa19.34■□□□□ 0.69
HDAC4-201ENST00000345617 SNAP47Q5SQN1 464 aa19.34■□□□□ 0.69
HDAC4-201ENST00000345617 ZNF730Q6ZMV8 503 aa19.34■□□□□ 0.69
HDAC4-201ENST00000345617 ZBTB11O95625 1053 aaPredicted RBP19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms