RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 RASGRP1O95267 797 aa14.42□□□□□ -0.1
HMGN3-202ENST00000344726 NDUFA10O95299 355 aa14.42□□□□□ -0.1
HMGN3-202ENST00000344726 HOXC4P09017 264 aaPredicted RBP14.42□□□□□ -0.1
HMGN3-202ENST00000344726 KRT10P13645 584 aa14.42□□□□□ -0.1
HMGN3-202ENST00000344726 CES1P23141 567 aa14.42□□□□□ -0.1
HMGN3-202ENST00000344726 HTR1BP28222 390 aa14.42□□□□□ -0.1
HMGN3-202ENST00000344726 CYLC1P35663 651 aaPredicted RBP14.42□□□□□ -0.1
HMGN3-202ENST00000344726 PDX1P52945 283 aa14.42□□□□□ -0.1
HMGN3-202ENST00000344726 IFI35P80217 286 aaPredicted RBP14.42□□□□□ -0.1
HMGN3-202ENST00000344726 SKOR1P84550 965 aa14.42□□□□□ -0.1
HMGN3-202ENST00000344726 PTSQ03393 145 aa14.42□□□□□ -0.1
HMGN3-202ENST00000344726 AP1B1Q10567 949 aa14.42□□□□□ -0.1
HMGN3-202ENST00000344726 LRRC66Q68CR7 880 aa14.42□□□□□ -0.1
HMGN3-202ENST00000344726 RAD9BQ6WBX8 426 aa14.42□□□□□ -0.1
HMGN3-202ENST00000344726 USP45Q70EL2 814 aa14.42□□□□□ -0.1
HMGN3-202ENST00000344726 TECPR1Q7Z6L1 1165 aa14.42□□□□□ -0.1
HMGN3-202ENST00000344726 KYQ8NBH2 561 aa14.42□□□□□ -0.1
HMGN3-202ENST00000344726 OR56A4Q8NGH8 313 aa14.42□□□□□ -0.1
HMGN3-202ENST00000344726 MAPK15Q8TD08 544 aa14.42□□□□□ -0.1
HMGN3-202ENST00000344726 ZNF830Q96NB3 372 aaPredicted RBP14.42□□□□□ -0.1
HMGN3-202ENST00000344726 MAK16Q9BXY0 300 aaKnown RBP14.42□□□□□ -0.1
HMGN3-202ENST00000344726 WDR26Q9H7D7 661 aa14.42□□□□□ -0.1
HMGN3-202ENST00000344726 RABGEF1Q9UJ41 708 aa14.42□□□□□ -0.1
HMGN3-202ENST00000344726 AK5Q9Y6K8 562 aa14.42□□□□□ -0.1
HMGN3-202ENST00000344726 DGKBQ9Y6T7 804 aa14.42□□□□□ -0.1
HMGN3-202ENST00000344726 PMS2P1A4D2B8 440 aa14.41□□□□□ -0.1
HMGN3-202ENST00000344726 PSMD11O00231 422 aa14.41□□□□□ -0.1
HMGN3-202ENST00000344726 CACNB4O00305 520 aaPredicted RBP14.41□□□□□ -0.1
HMGN3-202ENST00000344726 CSO75390 466 aaKnown RBP14.41□□□□□ -0.1
HMGN3-202ENST00000344726 SOD1P00441 154 aa14.41□□□□□ -0.1
HMGN3-202ENST00000344726 FUCA1P04066 466 aa14.41□□□□□ -0.1
HMGN3-202ENST00000344726 ANXA6P08133 673 aa14.41□□□□□ -0.1
HMGN3-202ENST00000344726 PECAM1P16284 738 aaPredicted RBP14.41□□□□□ -0.1
HMGN3-202ENST00000344726 ZFXP17010 805 aaPredicted RBP14.41□□□□□ -0.1
HMGN3-202ENST00000344726 ITPKBP27987 946 aa14.41□□□□□ -0.1
HMGN3-202ENST00000344726 CD86P42081 329 aa14.41□□□□□ -0.1
HMGN3-202ENST00000344726 BLKP51451 505 aa14.41□□□□□ -0.1
HMGN3-202ENST00000344726 DUSP3P51452 185 aaPredicted RBP14.41□□□□□ -0.1
HMGN3-202ENST00000344726 ARHGEF7Q14155 803 aa14.41□□□□□ -0.1
HMGN3-202ENST00000344726 PDK1Q15118 436 aa14.41□□□□□ -0.1
HMGN3-202ENST00000344726 ELOCQ15369 112 aa14.41□□□□□ -0.1
HMGN3-202ENST00000344726 NR0B2Q15466 257 aa14.41□□□□□ -0.1
HMGN3-202ENST00000344726 SPA17Q15506 151 aa14.41□□□□□ -0.1
HMGN3-202ENST00000344726 C11orf63Q6NUN7 778 aa14.41□□□□□ -0.1
HMGN3-202ENST00000344726 SPOCD1Q6ZMY3 1216 aa14.41□□□□□ -0.1
HMGN3-202ENST00000344726 HEATR4Q86WZ0 1026 aa14.41□□□□□ -0.1
HMGN3-202ENST00000344726 TMTC1Q8IUR5 882 aa14.41□□□□□ -0.1
HMGN3-202ENST00000344726 FSTL5Q8N475 847 aaPredicted RBP14.41□□□□□ -0.1
HMGN3-202ENST00000344726 PTCD2Q8WV60 388 aaKnown RBP14.41□□□□□ -0.1
HMGN3-202ENST00000344726 KRT35Q92764 455 aa14.41□□□□□ -0.1
HMGN3-202ENST00000344726 RBM15Q96T37 977 aaKnown RBP eCLIP14.41□□□□□ -0.1
HMGN3-202ENST00000344726 TEX101Q9BY14 249 aa14.41□□□□□ -0.1
HMGN3-202ENST00000344726 PCDH9Q9HC56 1237 aa14.41□□□□□ -0.1
HMGN3-202ENST00000344726 CD84Q9UIB8 345 aa14.41□□□□□ -0.1
HMGN3-202ENST00000344726 DUSP10Q9Y6W6 482 aa14.41□□□□□ -0.1
HMGN3-202ENST00000344726 CACNA1GO43497 2377 aa14.41□□□□□ -0.1
HMGN3-202ENST00000344726 hCG_1818297A0A087WSY0 165 aa14.4□□□□□ -0.1
HMGN3-202ENST00000344726 CAPN8A6NHC0 703 aa14.4□□□□□ -0.1
HMGN3-202ENST00000344726 CST8O60676 142 aa14.4□□□□□ -0.1
HMGN3-202ENST00000344726 TNFP01375 233 aa14.4□□□□□ -0.1
HMGN3-202ENST00000344726 MPOP05164 745 aa14.4□□□□□ -0.1
HMGN3-202ENST00000344726 MYCLP1P12525 358 aaPredicted RBP14.4□□□□□ -0.1
HMGN3-202ENST00000344726 CTSEP14091 401 aa14.4□□□□□ -0.1
HMGN3-202ENST00000344726 NFKBIAP25963 317 aa14.4□□□□□ -0.1
HMGN3-202ENST00000344726 EIF2S3P41091 472 aaKnown RBP14.4□□□□□ -0.1
HMGN3-202ENST00000344726 EPHB1P54762 984 aa14.4□□□□□ -0.1
HMGN3-202ENST00000344726 ODF2Q5BJF6 829 aa14.4□□□□□ -0.1
HMGN3-202ENST00000344726 KAZNQ674X7 775 aa14.4□□□□□ -0.1
HMGN3-202ENST00000344726 PDZD3Q86UT5 571 aa14.4□□□□□ -0.1
HMGN3-202ENST00000344726 TMEM139Q8IV31 216 aa14.4□□□□□ -0.1
HMGN3-202ENST00000344726 KATNAL2Q8IYT4 538 aa14.4□□□□□ -0.1
HMGN3-202ENST00000344726 ACRBPQ8NEB7 543 aa14.4□□□□□ -0.1
HMGN3-202ENST00000344726 LPCAT1Q8NF37 534 aa14.4□□□□□ -0.1
HMGN3-202ENST00000344726 ATL2Q8NHH9 583 aa14.4□□□□□ -0.1
HMGN3-202ENST00000344726 CCL4L1Q8NHW4 92 aa14.4□□□□□ -0.1
HMGN3-202ENST00000344726 SCAMP4Q969E2 229 aa14.4□□□□□ -0.1
HMGN3-202ENST00000344726 AGAP2Q99490 1192 aa14.4□□□□□ -0.1
HMGN3-202ENST00000344726 ABCG8Q9H221 673 aa14.4□□□□□ -0.1
HMGN3-202ENST00000344726 SEPT10Q9P0V9 454 aa14.4□□□□□ -0.1
HMGN3-202ENST00000344726 SIRPGQ9P1W8 387 aa14.4□□□□□ -0.1
HMGN3-202ENST00000344726 PRSS38A1L453 326 aa14.39□□□□□ -0.11
HMGN3-202ENST00000344726 TNFRSF10CO14798 259 aa14.39□□□□□ -0.11
HMGN3-202ENST00000344726 PPP1R12AO14974 1030 aaPredicted RBP14.39□□□□□ -0.11
HMGN3-202ENST00000344726 USP12O75317 370 aa14.39□□□□□ -0.11
HMGN3-202ENST00000344726 CLDN7O95471 211 aa14.39□□□□□ -0.11
HMGN3-202ENST00000344726 CEACAM5P06731 702 aa14.39□□□□□ -0.11
HMGN3-202ENST00000344726 ZNF30P17039 623 aa14.39□□□□□ -0.11
HMGN3-202ENST00000344726 STC1P52823 247 aa14.39□□□□□ -0.11
HMGN3-202ENST00000344726 CDK3Q00526 305 aa14.39□□□□□ -0.11
HMGN3-202ENST00000344726 DPTQ07507 201 aa14.39□□□□□ -0.11
HMGN3-202ENST00000344726 PRKD1Q15139 912 aaPredicted RBP14.39□□□□□ -0.11
HMGN3-202ENST00000344726 QPCTQ16769 361 aa14.39□□□□□ -0.11
HMGN3-202ENST00000344726 ISXQ2M1V0 245 aa14.39□□□□□ -0.11
HMGN3-202ENST00000344726 TFDP3Q5H9I0 405 aa14.39□□□□□ -0.11
HMGN3-202ENST00000344726 RAET1GQ6H3X3 334 aa14.39□□□□□ -0.11
HMGN3-202ENST00000344726 DAAM2Q86T65 1068 aa14.39□□□□□ -0.11
HMGN3-202ENST00000344726 NDUFAF2Q8N183 169 aa14.39□□□□□ -0.11
HMGN3-202ENST00000344726 ARL10Q8N8L6 244 aa14.39□□□□□ -0.11
HMGN3-202ENST00000344726 SNIP1Q8TAD8 396 aaKnown RBP14.39□□□□□ -0.11
HMGN3-202ENST00000344726 TADA1Q96BN2 335 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms