RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 USP45Q70EL2 814 aa12.42□□□□□ -0.42
SGCA-202ENST00000344627 CPNE8Q86YQ8 564 aa12.42□□□□□ -0.42
SGCA-202ENST00000344627 LRRC49Q8IUZ0 686 aa12.42□□□□□ -0.42
SGCA-202ENST00000344627 MAP7D3Q8IWC1 876 aa12.42□□□□□ -0.42
SGCA-202ENST00000344627 NDUFAF2Q8N183 169 aa12.42□□□□□ -0.42
SGCA-202ENST00000344627 Q8N9G6 341 aaPredicted RBP12.42□□□□□ -0.42
SGCA-202ENST00000344627 CCNYQ8ND76 341 aa12.42□□□□□ -0.42
SGCA-202ENST00000344627 GPR156Q8NFN8 814 aa12.42□□□□□ -0.42
SGCA-202ENST00000344627 OR8K1Q8NGG5 319 aa12.42□□□□□ -0.42
SGCA-202ENST00000344627 KIAA1524Q8TCG1 905 aa12.42□□□□□ -0.42
SGCA-202ENST00000344627 CMKLR1Q99788 373 aa12.42□□□□□ -0.42
SGCA-202ENST00000344627 SEMA3CQ99985 751 aa12.42□□□□□ -0.42
SGCA-202ENST00000344627 MGME1Q9BQP7 344 aa12.42□□□□□ -0.42
SGCA-202ENST00000344627 PACSIN1Q9BY11 444 aa12.42□□□□□ -0.42
SGCA-202ENST00000344627 LRRN3Q9H3W5 708 aa12.42□□□□□ -0.42
SGCA-202ENST00000344627 FGF22Q9HCT0 170 aa12.42□□□□□ -0.42
SGCA-202ENST00000344627 PHPT1Q9NRX4 125 aaPredicted RBP12.42□□□□□ -0.42
SGCA-202ENST00000344627 HAUS2Q9NVX0 235 aa12.42□□□□□ -0.42
SGCA-202ENST00000344627 RCOR3Q9P2K3 495 aaPredicted RBP12.42□□□□□ -0.42
SGCA-202ENST00000344627 UVRAGQ9P2Y5 699 aa12.42□□□□□ -0.42
SGCA-202ENST00000344627 PCDHB11Q9Y5F2 797 aa12.42□□□□□ -0.42
SGCA-202ENST00000344627 LRP4O75096 1905 aa12.42□□□□□ -0.42
SGCA-202ENST00000344627 KALRNO60229 2985 aa12.41□□□□□ -0.42
SGCA-202ENST00000344627 B4DGG1 531 aa12.41□□□□□ -0.42
SGCA-202ENST00000344627 HEXIM1O94992 359 aaKnown RBP12.41□□□□□ -0.42
SGCA-202ENST00000344627 PGLSO95336 258 aa12.41□□□□□ -0.42
SGCA-202ENST00000344627 KRT7P08729 469 aa12.41□□□□□ -0.42
SGCA-202ENST00000344627 JMJD7P0C870 316 aa12.41□□□□□ -0.42
SGCA-202ENST00000344627 LIPCP11150 499 aa12.41□□□□□ -0.42
SGCA-202ENST00000344627 CR2P20023 1033 aa12.41□□□□□ -0.42
SGCA-202ENST00000344627 IL4RP24394 825 aa12.41□□□□□ -0.42
SGCA-202ENST00000344627 TRIM23P36406 574 aa12.41□□□□□ -0.42
SGCA-202ENST00000344627 GARSP41250 739 aaKnown RBP12.41□□□□□ -0.42
SGCA-202ENST00000344627 TRIM14Q14142 442 aa12.41□□□□□ -0.42
SGCA-202ENST00000344627 DPYSL3Q14195 570 aa12.41□□□□□ -0.42
SGCA-202ENST00000344627 PDK2Q15119 407 aa12.41□□□□□ -0.42
SGCA-202ENST00000344627 PTPRRQ15256 657 aa12.41□□□□□ -0.42
SGCA-202ENST00000344627 SLC18A3Q16572 532 aa12.41□□□□□ -0.42
SGCA-202ENST00000344627 IFI16Q16666 785 aaKnown RBP12.41□□□□□ -0.42
SGCA-202ENST00000344627 ODF2Q5BJF6 829 aa12.41□□□□□ -0.42
SGCA-202ENST00000344627 ANKRD20A8PQ5CZ79 823 aa12.41□□□□□ -0.42
SGCA-202ENST00000344627 RALGPS1Q5JS13 557 aa12.41□□□□□ -0.42
SGCA-202ENST00000344627 SPECC1LQ69YQ0 1117 aa12.41□□□□□ -0.42
SGCA-202ENST00000344627 RAET1GQ6H3X3 334 aa12.41□□□□□ -0.42
SGCA-202ENST00000344627 TIGD7Q6NT04 549 aaPredicted RBP12.41□□□□□ -0.42
SGCA-202ENST00000344627 HSD11B1LQ7Z5J1 315 aa12.41□□□□□ -0.42
SGCA-202ENST00000344627 ZSCAN1Q8NBB4 408 aa12.41□□□□□ -0.42
SGCA-202ENST00000344627 LRRN4Q8WUT4 740 aa12.41□□□□□ -0.42
SGCA-202ENST00000344627 CCDC74AQ96AQ1 378 aa12.41□□□□□ -0.42
SGCA-202ENST00000344627 COQ10AQ96MF6 247 aa12.41□□□□□ -0.42
SGCA-202ENST00000344627 DPYSL5Q9BPU6 564 aa12.41□□□□□ -0.42
SGCA-202ENST00000344627 LGR4Q9BXB1 951 aa12.41□□□□□ -0.42
SGCA-202ENST00000344627 TMEM168Q9H0V1 697 aa12.41□□□□□ -0.42
SGCA-202ENST00000344627 TSPY26PQ9H489 355 aa12.41□□□□□ -0.42
SGCA-202ENST00000344627 DPEP2Q9H4A9 486 aa12.41□□□□□ -0.42
SGCA-202ENST00000344627 RBM22Q9NW64 420 aaKnown RBP eCLIP12.41□□□□□ -0.42
SGCA-202ENST00000344627 GCN1Q92616 2671 aaKnown RBP12.41□□□□□ -0.42
SGCA-202ENST00000344627 A0A1W2PNU3 283 aaPredicted RBP12.4□□□□□ -0.42
SGCA-202ENST00000344627 PRSS38A1L453 326 aa12.4□□□□□ -0.42
SGCA-202ENST00000344627 NPIPB15A6NHN6 443 aaPredicted RBP12.4□□□□□ -0.42
SGCA-202ENST00000344627 AGRPO00253 132 aa12.4□□□□□ -0.42
SGCA-202ENST00000344627 CASC3O15234 703 aaKnown RBP12.4□□□□□ -0.42
SGCA-202ENST00000344627 GM2AP17900 193 aa12.4□□□□□ -0.42
SGCA-202ENST00000344627 TEAD1P28347 426 aa12.4□□□□□ -0.42
SGCA-202ENST00000344627 UGT1A5P35504 534 aa12.4□□□□□ -0.42
SGCA-202ENST00000344627 ETV3P41162 512 aa12.4□□□□□ -0.42
SGCA-202ENST00000344627 PDX1P52945 283 aa12.4□□□□□ -0.42
SGCA-202ENST00000344627 TAS2R40P59535 323 aa12.4□□□□□ -0.42
SGCA-202ENST00000344627 CCL7P80098 99 aa12.4□□□□□ -0.42
SGCA-202ENST00000344627 ZFP36L1Q07352 338 aaKnown RBP12.4□□□□□ -0.42
SGCA-202ENST00000344627 GALNT2Q10471 571 aa12.4□□□□□ -0.42
SGCA-202ENST00000344627 BIRC2Q13490 618 aa12.4□□□□□ -0.42
SGCA-202ENST00000344627 PAFAH1B3Q15102 231 aaKnown RBP12.4□□□□□ -0.42
SGCA-202ENST00000344627 C14orf28Q4W4Y0 310 aa12.4□□□□□ -0.42
SGCA-202ENST00000344627 CERCAMQ5T4B2 595 aa12.4□□□□□ -0.42
SGCA-202ENST00000344627 KCTD16Q68DU8 428 aa12.4□□□□□ -0.42
SGCA-202ENST00000344627 NCBP2-AS2Q69YL0 99 aa12.4□□□□□ -0.42
SGCA-202ENST00000344627 Q6ZVL8 140 aa12.4□□□□□ -0.42
SGCA-202ENST00000344627 TSPAN33Q86UF1 283 aa12.4□□□□□ -0.42
SGCA-202ENST00000344627 HEATR4Q86WZ0 1026 aa12.4□□□□□ -0.42
SGCA-202ENST00000344627 CCNJLQ8IV13 435 aa12.4□□□□□ -0.42
SGCA-202ENST00000344627 RAVER1Q8IY67 606 aaKnown RBP12.4□□□□□ -0.42
SGCA-202ENST00000344627 PELI3Q8N2H9 469 aa12.4□□□□□ -0.42
SGCA-202ENST00000344627 RNF214Q8ND24 703 aa12.4□□□□□ -0.42
SGCA-202ENST00000344627 SGF29Q96ES7 293 aa12.4□□□□□ -0.42
SGCA-202ENST00000344627 SCRN2Q96FV2 425 aa12.4□□□□□ -0.42
SGCA-202ENST00000344627 ZNF830Q96NB3 372 aaPredicted RBP12.4□□□□□ -0.42
SGCA-202ENST00000344627 MAK16Q9BXY0 300 aaKnown RBP12.4□□□□□ -0.42
SGCA-202ENST00000344627 POLR1EQ9GZS1 481 aaKnown RBP12.4□□□□□ -0.42
SGCA-202ENST00000344627 CARS2Q9HA77 564 aaKnown RBP12.4□□□□□ -0.42
SGCA-202ENST00000344627 EPB41L5Q9HCM4 733 aa12.4□□□□□ -0.42
SGCA-202ENST00000344627 CD84Q9UIB8 345 aa12.4□□□□□ -0.42
SGCA-202ENST00000344627 CHKBQ9Y259 395 aa12.4□□□□□ -0.42
SGCA-202ENST00000344627 A0A0U1RQS6 177 aa12.39□□□□□ -0.43
SGCA-202ENST00000344627 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.39□□□□□ -0.43
SGCA-202ENST00000344627 PSMD11O00231 422 aa12.39□□□□□ -0.43
SGCA-202ENST00000344627 HGSO14964 777 aaPredicted RBP12.39□□□□□ -0.43
SGCA-202ENST00000344627 MATN3O15232 486 aa12.39□□□□□ -0.43
SGCA-202ENST00000344627 RPLP0P05388 317 aaKnown RBP12.39□□□□□ -0.43
SGCA-202ENST00000344627 TNNT1P13805 278 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms