RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 TEX9Q8N6V9 391 aa16.4■□□□□ 0.22
SMARCA4-201ENST00000344626 CNDP1Q96KN2 507 aa16.4■□□□□ 0.22
SMARCA4-201ENST00000344626 TAGLN3Q9UI15 199 aa16.4■□□□□ 0.22
SMARCA4-201ENST00000344626 IGKV6-21A0A0C4DH24 114 aa16.39■□□□□ 0.21
SMARCA4-201ENST00000344626 KLF8O95600 359 aaPredicted RBP16.39■□□□□ 0.21
SMARCA4-201ENST00000344626 MT-CO1P00395 513 aa16.39■□□□□ 0.21
SMARCA4-201ENST00000344626 ITGA2BP08514 1039 aa16.39■□□□□ 0.21
SMARCA4-201ENST00000344626 MYOGP15173 224 aa16.39■□□□□ 0.21
SMARCA4-201ENST00000344626 HCAR3P49019 387 aa16.39■□□□□ 0.21
SMARCA4-201ENST00000344626 CRYMQ14894 314 aa16.39■□□□□ 0.21
SMARCA4-201ENST00000344626 INAVAQ3KP66 663 aa16.39■□□□□ 0.21
SMARCA4-201ENST00000344626 CERCAMQ5T4B2 595 aa16.39■□□□□ 0.21
SMARCA4-201ENST00000344626 FBXL22Q6P050 247 aa16.39■□□□□ 0.21
SMARCA4-201ENST00000344626 CAMKK1Q8N5S9 505 aa16.39■□□□□ 0.21
SMARCA4-201ENST00000344626 SMOQ99835 787 aa16.39■□□□□ 0.21
SMARCA4-201ENST00000344626 ACSS3Q9H6R3 686 aa16.39■□□□□ 0.21
SMARCA4-201ENST00000344626 SIX4Q9UIU6 781 aa16.39■□□□□ 0.21
SMARCA4-201ENST00000344626 AP3M1Q9Y2T2 418 aa16.39■□□□□ 0.21
SMARCA4-201ENST00000344626 HS6ST1O60243 411 aa16.39■□□□□ 0.21
SMARCA4-201ENST00000344626 PKMP14618 531 aaKnown RBP16.39■□□□□ 0.21
SMARCA4-201ENST00000344626 MAGEA9P43362 315 aa16.39■□□□□ 0.21
SMARCA4-201ENST00000344626 RPL14P50914 215 aaKnown RBP16.39■□□□□ 0.21
SMARCA4-201ENST00000344626 TOMM20Q15388 145 aa16.39■□□□□ 0.21
SMARCA4-201ENST00000344626 ARSIQ5FYB1 569 aa16.39■□□□□ 0.21
SMARCA4-201ENST00000344626 XKR6Q5GH73 641 aa16.39■□□□□ 0.21
SMARCA4-201ENST00000344626 ZNF776Q68DI1 518 aaPredicted RBP16.39■□□□□ 0.21
SMARCA4-201ENST00000344626 BLOC1S6Q9UL45 172 aa16.39■□□□□ 0.21
SMARCA4-201ENST00000344626 ACTL7BQ9Y614 415 aa16.39■□□□□ 0.21
SMARCA4-201ENST00000344626 S100A3P33764 101 aa16.39■□□□□ 0.21
SMARCA4-201ENST00000344626 ZNHIT3Q15649 155 aaPredicted RBP16.39■□□□□ 0.21
SMARCA4-201ENST00000344626 KLHDC9Q8NEP7 349 aa16.39■□□□□ 0.21
SMARCA4-201ENST00000344626 TMEM237Q96Q45 408 aa16.39■□□□□ 0.21
SMARCA4-201ENST00000344626 NDUFAF1Q9Y375 327 aa16.39■□□□□ 0.21
SMARCA4-201ENST00000344626 ATP6V1C1P21283 382 aa16.39■□□□□ 0.21
SMARCA4-201ENST00000344626 CPA2P48052 419 aa16.39■□□□□ 0.21
SMARCA4-201ENST00000344626 DMTNQ08495 405 aa16.39■□□□□ 0.21
SMARCA4-201ENST00000344626 SLC39A11Q8N1S5 342 aa16.39■□□□□ 0.21
SMARCA4-201ENST00000344626 BRSK1Q8TDC3 778 aa16.39■□□□□ 0.21
SMARCA4-201ENST00000344626 CLP1Q92989 425 aaKnown RBP16.39■□□□□ 0.21
SMARCA4-201ENST00000344626 VPS33AQ96AX1 596 aa16.39■□□□□ 0.21
SMARCA4-201ENST00000344626 VMP1Q96GC9 406 aa16.39■□□□□ 0.21
SMARCA4-201ENST00000344626 LMAN2LQ9H0V9 348 aa16.39■□□□□ 0.21
SMARCA4-201ENST00000344626 RHOJQ9H4E5 214 aa16.39■□□□□ 0.21
SMARCA4-201ENST00000344626 MTRRQ9UBK8 725 aa16.39■□□□□ 0.21
SMARCA4-201ENST00000344626 HCFC2Q9Y5Z7 792 aa16.39■□□□□ 0.21
SMARCA4-201ENST00000344626 GTF2E2P29084 291 aaKnown RBP16.38■□□□□ 0.21
SMARCA4-201ENST00000344626 FOXM1Q08050 763 aa16.38■□□□□ 0.21
SMARCA4-201ENST00000344626 ZBTB17Q13105 803 aa16.38■□□□□ 0.21
SMARCA4-201ENST00000344626 WDR45BQ5MNZ6 344 aa16.38■□□□□ 0.21
SMARCA4-201ENST00000344626 CAPN13Q6MZZ7 669 aaPredicted RBP16.38■□□□□ 0.21
SMARCA4-201ENST00000344626 HFE2Q6ZVN8 426 aa16.38■□□□□ 0.21
SMARCA4-201ENST00000344626 UBE2R2Q712K3 238 aaPredicted RBP16.38■□□□□ 0.21
SMARCA4-201ENST00000344626 TMEM132CQ8N3T6 1108 aa16.38■□□□□ 0.21
SMARCA4-201ENST00000344626 HERC2P3Q9BVR0 1158 aa16.38■□□□□ 0.21
SMARCA4-201ENST00000344626 OSBPL1AQ9BXW6 950 aa16.38■□□□□ 0.21
SMARCA4-201ENST00000344626 CCDC154A6NI56 674 aa16.38■□□□□ 0.21
SMARCA4-201ENST00000344626 RNF225M0QZC1 329 aaPredicted RBP16.38■□□□□ 0.21
SMARCA4-201ENST00000344626 SLC28A1O00337 649 aa16.38■□□□□ 0.21
SMARCA4-201ENST00000344626 ABCB1P08183 1280 aaPredicted RBP16.38■□□□□ 0.21
SMARCA4-201ENST00000344626 RASA2Q15283 850 aa16.38■□□□□ 0.21
SMARCA4-201ENST00000344626 ICE2Q659A1 982 aa16.38■□□□□ 0.21
SMARCA4-201ENST00000344626 TTYH3Q9C0H2 523 aa16.38■□□□□ 0.21
SMARCA4-201ENST00000344626 SIRPGQ9P1W8 387 aa16.38■□□□□ 0.21
SMARCA4-201ENST00000344626 OR2AG2A6NM03 316 aa16.38■□□□□ 0.21
SMARCA4-201ENST00000344626 CALB2P22676 271 aa16.38■□□□□ 0.21
SMARCA4-201ENST00000344626 CENPAP49450 140 aa16.38■□□□□ 0.21
SMARCA4-201ENST00000344626 PARP9Q8IXQ6 854 aa16.38■□□□□ 0.21
SMARCA4-201ENST00000344626 SLC35F5Q8WV83 523 aa16.38■□□□□ 0.21
SMARCA4-201ENST00000344626 INPP5DQ92835 1189 aa16.38■□□□□ 0.21
SMARCA4-201ENST00000344626 IL36AQ9UHA7 158 aa16.38■□□□□ 0.21
SMARCA4-201ENST00000344626 REXO2Q9Y3B8 237 aaKnown RBP16.38■□□□□ 0.21
SMARCA4-201ENST00000344626 BACE2Q9Y5Z0 518 aa16.38■□□□□ 0.21
SMARCA4-201ENST00000344626 CACNA1GO43497 2377 aa16.38■□□□□ 0.21
SMARCA4-201ENST00000344626 EDDM13A0A1B0GTR0 161 aa16.38■□□□□ 0.21
SMARCA4-201ENST00000344626 FAM237BA0A1B0GVD1 139 aa16.38■□□□□ 0.21
SMARCA4-201ENST00000344626 SNAP91O60641 907 aa16.38■□□□□ 0.21
SMARCA4-201ENST00000344626 ULK1O75385 1050 aa16.38■□□□□ 0.21
SMARCA4-201ENST00000344626 ACTR1BP42025 376 aa16.38■□□□□ 0.21
SMARCA4-201ENST00000344626 ACTR1AP61163 376 aa16.38■□□□□ 0.21
SMARCA4-201ENST00000344626 PPP3R2Q96LZ3 170 aa16.38■□□□□ 0.21
SMARCA4-201ENST00000344626 PIGNO95427 931 aa16.37■□□□□ 0.21
SMARCA4-201ENST00000344626 COX7A2P14406 83 aa16.37■□□□□ 0.21
SMARCA4-201ENST00000344626 ALDH6A1Q02252 535 aaKnown RBP16.37■□□□□ 0.21
SMARCA4-201ENST00000344626 ENPP7Q6UWV6 458 aa16.37■□□□□ 0.21
SMARCA4-201ENST00000344626 ZNF567Q8N184 647 aa16.37■□□□□ 0.21
SMARCA4-201ENST00000344626 ZBTB2Q8N680 514 aa16.37■□□□□ 0.21
SMARCA4-201ENST00000344626 CCDC134Q9H6E4 229 aa16.37■□□□□ 0.21
SMARCA4-201ENST00000344626 MRPS33Q9Y291 106 aaKnown RBP16.37■□□□□ 0.21
SMARCA4-201ENST00000344626 NAV1Q8NEY1 1877 aa16.37■□□□□ 0.21
SMARCA4-201ENST00000344626 RAB33AQ14088 237 aa16.37■□□□□ 0.21
SMARCA4-201ENST00000344626 AP5B1Q2VPB7 878 aa16.37■□□□□ 0.21
SMARCA4-201ENST00000344626 C17orf64Q86WR6 236 aa16.37■□□□□ 0.21
SMARCA4-201ENST00000344626 CDK20Q8IZL9 346 aa16.37■□□□□ 0.21
SMARCA4-201ENST00000344626 COL26A1Q96A83 441 aa16.37■□□□□ 0.21
SMARCA4-201ENST00000344626 CATSPER2Q96P56 530 aa16.37■□□□□ 0.21
SMARCA4-201ENST00000344626 SDCBP2Q9H190 292 aa16.37■□□□□ 0.21
SMARCA4-201ENST00000344626 CYP8B1Q9UNU6 501 aa16.37■□□□□ 0.21
SMARCA4-201ENST00000344626 SNTNA6NMZ2 147 aa16.37■□□□□ 0.21
SMARCA4-201ENST00000344626 PTGESO14684 152 aa16.37■□□□□ 0.21
SMARCA4-201ENST00000344626 LBPP18428 481 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms