RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 BTNL10A8MVZ5 291 aa16.04■□□□□ 0.16
ATG4B-201ENST00000344376 MTSS1O43312 755 aa16.04■□□□□ 0.16
ATG4B-201ENST00000344376 MT-CO3P00414 261 aa16.04■□□□□ 0.16
ATG4B-201ENST00000344376 CELA2BP08218 269 aaPredicted RBP16.04■□□□□ 0.16
ATG4B-201ENST00000344376 CDC25BP30305 580 aa16.04■□□□□ 0.16
ATG4B-201ENST00000344376 GPR1P46091 355 aa16.04■□□□□ 0.16
ATG4B-201ENST00000344376 VAV2P52735 878 aa16.04■□□□□ 0.16
ATG4B-201ENST00000344376 SKOR1P84550 965 aa16.04■□□□□ 0.16
ATG4B-201ENST00000344376 PTPRRQ15256 657 aa16.04■□□□□ 0.16
ATG4B-201ENST00000344376 TCEA2Q15560 299 aa16.04■□□□□ 0.16
ATG4B-201ENST00000344376 GUSBP11Q6P575 273 aa16.04■□□□□ 0.16
ATG4B-201ENST00000344376 RAD9BQ6WBX8 426 aa16.04■□□□□ 0.16
ATG4B-201ENST00000344376 ZNF765Q7L2R6 523 aa16.04■□□□□ 0.16
ATG4B-201ENST00000344376 TECPR1Q7Z6L1 1165 aa16.04■□□□□ 0.16
ATG4B-201ENST00000344376 PROSER1Q86XN7 944 aa16.04■□□□□ 0.16
ATG4B-201ENST00000344376 SLC35F3Q8IY50 421 aa16.04■□□□□ 0.16
ATG4B-201ENST00000344376 RAVER1Q8IY67 606 aaKnown RBP16.04■□□□□ 0.16
ATG4B-201ENST00000344376 ARL10Q8N8L6 244 aa16.04■□□□□ 0.16
ATG4B-201ENST00000344376 MDM1Q8TC05 714 aa16.04■□□□□ 0.16
ATG4B-201ENST00000344376 DEPDC7Q96QD5 511 aa16.04■□□□□ 0.16
ATG4B-201ENST00000344376 MLPHQ9BV36 600 aaPredicted RBP16.04■□□□□ 0.16
ATG4B-201ENST00000344376 LGR4Q9BXB1 951 aa16.04■□□□□ 0.16
ATG4B-201ENST00000344376 SLC25A51Q9H1U9 297 aa16.04■□□□□ 0.16
ATG4B-201ENST00000344376 CYP4F12Q9HCS2 524 aa16.04■□□□□ 0.16
ATG4B-201ENST00000344376 GPR34Q9UPC5 381 aa16.04■□□□□ 0.16
ATG4B-201ENST00000344376 USP24Q9UPU5 2620 aa16.04■□□□□ 0.16
ATG4B-201ENST00000344376 TDRD6O60522 2096 aaKnown RBP16.04■□□□□ 0.16
ATG4B-201ENST00000344376 hCG_1818297A0A087WSY0 165 aa16.04■□□□□ 0.16
ATG4B-201ENST00000344376 C1orf232A0A0U1RR37 186 aa16.04■□□□□ 0.16
ATG4B-201ENST00000344376 PRSS38A1L453 326 aa16.04■□□□□ 0.16
ATG4B-201ENST00000344376 EME2A4GXA9 379 aaPredicted RBP16.04■□□□□ 0.16
ATG4B-201ENST00000344376 PRLP01236 227 aa16.04■□□□□ 0.16
ATG4B-201ENST00000344376 MMP2P08253 660 aa16.04■□□□□ 0.16
ATG4B-201ENST00000344376 MARCKSL1P49006 195 aa16.04■□□□□ 0.16
ATG4B-201ENST00000344376 STC1P52823 247 aa16.04■□□□□ 0.16
ATG4B-201ENST00000344376 CDK3Q00526 305 aa16.04■□□□□ 0.16
ATG4B-201ENST00000344376 IHHQ14623 411 aa16.04■□□□□ 0.16
ATG4B-201ENST00000344376 PRKD1Q15139 912 aaPredicted RBP16.04■□□□□ 0.16
ATG4B-201ENST00000344376 LLGL1Q15334 1064 aa16.04■□□□□ 0.16
ATG4B-201ENST00000344376 SLC14A2Q15849 920 aa16.04■□□□□ 0.16
ATG4B-201ENST00000344376 PPP2R5EQ16537 467 aa16.04■□□□□ 0.16
ATG4B-201ENST00000344376 TEX44Q53QW1 395 aa16.04■□□□□ 0.16
ATG4B-201ENST00000344376 CCDC181Q5TID7 509 aa16.04■□□□□ 0.16
ATG4B-201ENST00000344376 TAF8Q7Z7C8 310 aa16.04■□□□□ 0.16
ATG4B-201ENST00000344376 NRSN1Q8IZ57 195 aa16.04■□□□□ 0.16
ATG4B-201ENST00000344376 PELI3Q8N2H9 469 aa16.04■□□□□ 0.16
ATG4B-201ENST00000344376 DCBLD1Q8N8Z6 715 aa16.04■□□□□ 0.16
ATG4B-201ENST00000344376 ACRBPQ8NEB7 543 aa16.04■□□□□ 0.16
ATG4B-201ENST00000344376 CCHCR1Q8TD31 782 aa16.04■□□□□ 0.16
ATG4B-201ENST00000344376 IMP4Q96G21 291 aaKnown RBP16.04■□□□□ 0.16
ATG4B-201ENST00000344376 LYSMD1Q96S90 227 aa16.04■□□□□ 0.16
ATG4B-201ENST00000344376 MRPL40Q9NQ50 206 aaKnown RBP16.04■□□□□ 0.16
ATG4B-201ENST00000344376 SIRPGQ9P1W8 387 aa16.04■□□□□ 0.16
ATG4B-201ENST00000344376 GULP1Q9UBP9 304 aa16.04■□□□□ 0.16
ATG4B-201ENST00000344376 DKK4Q9UBT3 224 aa16.04■□□□□ 0.16
ATG4B-201ENST00000344376 CD84Q9UIB8 345 aa16.04■□□□□ 0.16
ATG4B-201ENST00000344376 PADI4Q9UM07 663 aa16.04■□□□□ 0.16
ATG4B-201ENST00000344376 SPEGQ15772 3267 aa16.03■□□□□ 0.16
ATG4B-201ENST00000344376 RCCD1A6NED2 376 aa16.03■□□□□ 0.16
ATG4B-201ENST00000344376 SRRM3A6NNA2 597 aaPredicted RBP16.03■□□□□ 0.16
ATG4B-201ENST00000344376 ANKRD66B4E2M5 251 aa16.03■□□□□ 0.16
ATG4B-201ENST00000344376 PECAM1P16284 738 aaPredicted RBP16.03■□□□□ 0.16
ATG4B-201ENST00000344376 CTNNA1P35221 906 aaKnown RBP16.03■□□□□ 0.16
ATG4B-201ENST00000344376 CETN2P41208 172 aa16.03■□□□□ 0.16
ATG4B-201ENST00000344376 TNNT3P45378 269 aaPredicted RBP16.03■□□□□ 0.16
ATG4B-201ENST00000344376 COPS2P61201 443 aa16.03■□□□□ 0.16
ATG4B-201ENST00000344376 PTSQ03393 145 aa16.03■□□□□ 0.16
ATG4B-201ENST00000344376 QPCTQ16769 361 aa16.03■□□□□ 0.16
ATG4B-201ENST00000344376 CCDC70Q6NSX1 233 aa16.03■□□□□ 0.16
ATG4B-201ENST00000344376 ADAMTSL4Q6UY14 1074 aa16.03■□□□□ 0.16
ATG4B-201ENST00000344376 NLRP8Q86W28 1048 aa16.03■□□□□ 0.16
ATG4B-201ENST00000344376 WDR48Q8TAF3 677 aa16.03■□□□□ 0.16
ATG4B-201ENST00000344376 KIAA1524Q8TCG1 905 aa16.03■□□□□ 0.16
ATG4B-201ENST00000344376 KRT35Q92764 455 aa16.03■□□□□ 0.16
ATG4B-201ENST00000344376 SMIM14Q96QK8 99 aa16.03■□□□□ 0.16
ATG4B-201ENST00000344376 ABCG8Q9H221 673 aa16.03■□□□□ 0.16
ATG4B-201ENST00000344376 CARS2Q9HA77 564 aaKnown RBP16.03■□□□□ 0.16
ATG4B-201ENST00000344376 GLOD4Q9HC38 313 aa16.03■□□□□ 0.16
ATG4B-201ENST00000344376 PKD2L2Q9NZM6 624 aa16.03■□□□□ 0.16
ATG4B-201ENST00000344376 SAE1Q9UBE0 346 aaPredicted RBP16.03■□□□□ 0.16
ATG4B-201ENST00000344376 REXO2Q9Y3B8 237 aaKnown RBP16.03■□□□□ 0.16
ATG4B-201ENST00000344376 ASPMQ8IZT6 3477 aa16.02■□□□□ 0.16
ATG4B-201ENST00000344376 PLXNB3Q9ULL4 1909 aa16.02■□□□□ 0.16
ATG4B-201ENST00000344376 A0A0U1RQS6 177 aa16.02■□□□□ 0.16
ATG4B-201ENST00000344376 CCDC66A2RUB6 948 aa16.02■□□□□ 0.16
ATG4B-201ENST00000344376 CLDN7O95471 211 aa16.02■□□□□ 0.16
ATG4B-201ENST00000344376 CAPNS1P04632 268 aa16.02■□□□□ 0.16
ATG4B-201ENST00000344376 PTPN3P26045 913 aa16.02■□□□□ 0.16
ATG4B-201ENST00000344376 CYP4F3Q08477 520 aa16.02■□□□□ 0.16
ATG4B-201ENST00000344376 GALNT3Q14435 633 aa16.02■□□□□ 0.16
ATG4B-201ENST00000344376 CDCP2Q5VXM1 449 aa16.02■□□□□ 0.16
ATG4B-201ENST00000344376 NYAP1Q6ZVC0 841 aa16.02■□□□□ 0.16
ATG4B-201ENST00000344376 B4GALNT4Q76KP1 1039 aa16.02■□□□□ 0.16
ATG4B-201ENST00000344376 ZC3H18Q86VM9 953 aaKnown RBP16.02■□□□□ 0.16
ATG4B-201ENST00000344376 KYQ8NBH2 561 aa16.02■□□□□ 0.16
ATG4B-201ENST00000344376 SPC24Q8NBT2 197 aa16.02■□□□□ 0.16
ATG4B-201ENST00000344376 OR6C4Q8NGE1 309 aa16.02■□□□□ 0.16
ATG4B-201ENST00000344376 HAUS1Q96CS2 278 aa16.02■□□□□ 0.16
ATG4B-201ENST00000344376 TEKT5Q96M29 485 aa16.02■□□□□ 0.16
ATG4B-201ENST00000344376 FERMT1Q9BQL6 677 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms