RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 RBBP8Q99708 897 aa8.14□□□□□ -1.11
ATG4A-201ENST00000343524 APBA2Q99767 749 aa8.14□□□□□ -1.11
ATG4A-201ENST00000343524 TMUB1Q9BVT8 246 aa8.14□□□□□ -1.11
ATG4A-201ENST00000343524 B3GNT4Q9C0J1 378 aa8.14□□□□□ -1.11
ATG4A-201ENST00000343524 LIN7BQ9HAP6 207 aa8.14□□□□□ -1.11
ATG4A-201ENST00000343524 LRRC4Q9HBW1 653 aa8.14□□□□□ -1.11
ATG4A-201ENST00000343524 GPRC5CQ9NQ84 441 aa8.14□□□□□ -1.11
ATG4A-201ENST00000343524 KCNQ5Q9NR82 932 aa8.14□□□□□ -1.11
ATG4A-201ENST00000343524 DTLQ9NZJ0 730 aa8.14□□□□□ -1.11
ATG4A-201ENST00000343524 FBXO5Q9UKT4 447 aa8.14□□□□□ -1.11
ATG4A-201ENST00000343524 KIAA1257Q9ULG3 409 aa8.14□□□□□ -1.11
ATG4A-201ENST00000343524 GPSM3Q9Y4H4 160 aa8.14□□□□□ -1.11
ATG4A-201ENST00000343524 CEP290O15078 2479 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 A0A1W2PQ72 361 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 OR5K3A6NET4 321 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 ZNF487B1APH4 448 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 ANGPT2O15123 496 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 LYPLA2O95372 231 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 MED26O95402 600 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 POLBP06746 335 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 THRBP10828 461 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 GFAPP14136 432 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 ENPP1P22413 925 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 ATP2B4P23634 1241 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 ADORA2AP29274 412 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 ETFBP38117 255 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 YAP1P46937 504 aaKnown RBP8.13□□□□□ -1.11
ATG4A-201ENST00000343524 GRIA4P48058 902 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 SLC9A3P48764 834 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 ZNF132P52740 706 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 OR2B6P58173 313 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 RPS6P62753 249 aaKnown RBP8.13□□□□□ -1.11
ATG4A-201ENST00000343524 PRKCDQ05655 676 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 YIF1BQ5BJH7 314 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 CASC4Q6P4E1 433 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 NAPRTQ6XQN6 538 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 KCTD1Q719H9 257 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 OTOP3Q7RTS5 596 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 CLEC14AQ86T13 490 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 RAVER1Q8IY67 606 aaKnown RBP8.13□□□□□ -1.11
ATG4A-201ENST00000343524 CMTR2Q8IYT2 770 aaKnown RBP8.13□□□□□ -1.11
ATG4A-201ENST00000343524 ADGRG5Q8IZF4 528 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 AGR3Q8TD06 166 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 ZNF606Q8WXB4 792 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 PIK3R3Q92569 461 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 NXNL1Q96CM4 212 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 TMCO6Q96DC7 493 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 ELMO2Q96JJ3 720 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 ZFYVE19Q96K21 471 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 CCDC17Q96LX7 622 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 PSKH2Q96QS6 385 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 PI4K2AQ9BTU6 479 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 ACAT2Q9BWD1 397 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 TEX13BQ9BXU2 312 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 DGCR6LQ9BY27 220 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 ACE2Q9BYF1 805 aaPredicted RBP8.13□□□□□ -1.11
ATG4A-201ENST00000343524 POLE4Q9NR33 117 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 ADPRHL2Q9NX46 363 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 NSMCE4AQ9NXX6 385 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 RAPGEFL1Q9UHV5 662 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 MKLN1Q9UL63 735 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 VPS4AQ9UN37 437 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 PTPRFP10586 1907 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 A0A096LPK6 155 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 AGAP5A6NIR3 686 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 LOC110117498-PIK3R3F6TDL0 507 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 UBDO15205 165 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 SLC16A4O15374 487 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 MED7O43513 233 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 EXTL3O43909 919 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 DFNA5O60443 496 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 NOS1APO75052 506 aaPredicted RBP8.13□□□□□ -1.11
ATG4A-201ENST00000343524 ENDOD1O94919 500 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 TRUB2O95900 331 aaKnown RBP8.13□□□□□ -1.11
ATG4A-201ENST00000343524 CALCAP01258 141 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 ELK4P28324 431 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 HTR3AP46098 478 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 ST13P50502 369 aaKnown RBP8.13□□□□□ -1.11
ATG4A-201ENST00000343524 YWHAEP62258 255 aaKnown RBP8.13□□□□□ -1.11
ATG4A-201ENST00000343524 DAG1Q14118 895 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 PLCL1Q15111 1095 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 ANO4Q32M45 955 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 ZNF404Q494X3 552 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 AGKQ53H12 422 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 ARL13AQ5H913 290 aaPredicted RBP8.13□□□□□ -1.11
ATG4A-201ENST00000343524 COQ5Q5HYK3 327 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 STEAP3Q658P3 488 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 CCBE1Q6UXH8 406 aaPredicted RBP8.13□□□□□ -1.11
ATG4A-201ENST00000343524 ZNF534Q76KX8 674 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 PIWIL4Q7Z3Z4 852 aaKnown RBP8.13□□□□□ -1.11
ATG4A-201ENST00000343524 RASAL3Q86YV0 1011 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 TCAIMQ8N3R3 496 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 MINDY1Q8N5J2 469 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 GALNT11Q8NCW6 608 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 IL17RDQ8NFM7 739 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 GABPB2Q8TAK5 448 aaPredicted RBP8.13□□□□□ -1.11
ATG4A-201ENST00000343524 ZNF566Q969W8 418 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 FAM122AQ96E09 287 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 MARK4Q96L34 752 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 MUS81Q96NY9 551 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms