RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 KIAA0408Q6ZU52 694 aa9.67□□□□□ -0.86
HOXA1-201ENST00000343060 NEK10Q6ZWH5 1172 aa9.67□□□□□ -0.86
HOXA1-201ENST00000343060 RIMKLAQ8IXN7 391 aa9.67□□□□□ -0.86
HOXA1-201ENST00000343060 DCP1BQ8IZD4 617 aaKnown RBP9.67□□□□□ -0.86
HOXA1-201ENST00000343060 MIER2Q8N344 545 aa9.67□□□□□ -0.86
HOXA1-201ENST00000343060 LRRC52Q8N7C0 313 aa9.67□□□□□ -0.86
HOXA1-201ENST00000343060 KIF12Q96FN5 646 aa9.67□□□□□ -0.86
HOXA1-201ENST00000343060 TSGA13Q96PP4 275 aa9.67□□□□□ -0.86
HOXA1-201ENST00000343060 LPIN3Q9BQK8 851 aa9.67□□□□□ -0.86
HOXA1-201ENST00000343060 FUNDC2Q9BWH2 189 aa9.67□□□□□ -0.86
HOXA1-201ENST00000343060 SDR39U1Q9NRG7 319 aaPredicted RBP9.67□□□□□ -0.86
HOXA1-201ENST00000343060 TREX1Q9NSU2 369 aa9.67□□□□□ -0.86
HOXA1-201ENST00000343060 THG1LQ9NWX6 298 aaKnown RBP9.67□□□□□ -0.86
HOXA1-201ENST00000343060 KLHL3Q9UH77 587 aa9.67□□□□□ -0.86
HOXA1-201ENST00000343060 FAM72CH0Y354 149 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 UPK1AO00322 258 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 PPEF2O14830 753 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 SPTLC1O15269 473 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 INPP4BO15327 924 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 ARF4P18085 180 aaPredicted RBP9.66□□□□□ -0.86
HOXA1-201ENST00000343060 EEF1DP29692 281 aaKnown RBP9.66□□□□□ -0.86
HOXA1-201ENST00000343060 ARSFP54793 590 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 DAG1Q14118 895 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 CSHL1Q14406 222 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 CAPRIN1Q14444 709 aaKnown RBP9.66□□□□□ -0.86
HOXA1-201ENST00000343060 CTF1Q16619 201 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 VPS26BQ4G0F5 336 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 PYCR3Q53H96 274 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 FAM72AQ5TYM5 149 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 CLEC6AQ6EIG7 209 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 FAM72DQ6L9T8 149 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 EFCAB12Q6NXP0 572 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 CATSPERGQ6ZRH7 1159 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 RPS27LQ71UM5 84 aaKnown RBP9.66□□□□□ -0.86
HOXA1-201ENST00000343060 THAP5Q7Z6K1 395 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 FAM35AQ86V20 835 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 FAM72BQ86X60 149 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 ZNF280CQ8ND82 737 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 TRAPPC12Q8WVT3 735 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 WNT8BQ93098 351 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 ALG2Q9H553 416 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 ATP13A3Q9H7F0 1226 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 RMND5AQ9H871 391 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 AS3MTQ9HBK9 375 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 SCUBE2Q9NQ36 999 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 HPS4Q9NQG7 708 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 SUN2Q9UH99 717 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 STAP1Q9ULZ2 295 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 OAS3Q9Y6K5 1087 aaKnown RBP9.66□□□□□ -0.86
HOXA1-201ENST00000343060 ZNF236Q9UL36 1845 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 EVPLQ92817 2033 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 C16orf96A6NNT2 1141 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 FAM47E-STBD1D6RA91 191 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 MGEA5O60502 916 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 GABARAPO95166 117 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 C22orf31O95567 290 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 ALPLP05186 524 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 FGF4P08620 206 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 MTHFD1P11586 935 aaKnown RBP9.66□□□□□ -0.86
HOXA1-201ENST00000343060 EEF1B2P24534 225 aaKnown RBP9.66□□□□□ -0.86
HOXA1-201ENST00000343060 HTR1BP28222 390 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 ADORA2BP29275 332 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 CHRNA5P30532 468 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 ADRA1BP35368 520 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 SLC26A2P50443 739 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 CLCN5P51795 746 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 RAD23AP54725 363 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 TPI1P60174 286 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 ZNF33AQ06730 810 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 SELENBP1Q13228 472 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 ACAP2Q15057 778 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 KIF19Q2TAC6 998 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 AASDHQ4L235 1098 aaPredicted RBP9.66□□□□□ -0.86
HOXA1-201ENST00000343060 ZNF484Q5JVG2 852 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 ZNF678Q5SXM1 525 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 DENND5AQ6IQ26 1287 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 ZNF280DQ6N043 979 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 ESRP1Q6NXG1 681 aaKnown RBP9.66□□□□□ -0.86
HOXA1-201ENST00000343060 BLOC1S3Q6QNY0 202 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 CRTC3Q6UUV7 619 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 PLEKHG7Q6ZR37 379 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 R3HCC1LQ7Z5L2 792 aaKnown RBP9.66□□□□□ -0.86
HOXA1-201ENST00000343060 CLYBLQ8N0X4 340 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 LINC01465Q8N7H1 131 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 OTUD5Q96G74 571 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 GJD4Q96KN9 370 aaPredicted RBP9.66□□□□□ -0.86
HOXA1-201ENST00000343060 TBL1YQ9BQ87 522 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 BDH2Q9BUT1 245 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 TPK1Q9H3S4 243 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 IL1RL2Q9HB29 575 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 NTN4Q9HB63 628 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 PIGVQ9NUD9 493 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 FBXO5Q9UKT4 447 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 TRPC5Q9UL62 973 aaPredicted RBP9.66□□□□□ -0.86
HOXA1-201ENST00000343060 SHROOM3Q8TF72 1996 aa9.66□□□□□ -0.86
HOXA1-201ENST00000343060 I6L893 689 aaPredicted RBP9.65□□□□□ -0.86
HOXA1-201ENST00000343060 NTRK1P04629 796 aa9.65□□□□□ -0.86
HOXA1-201ENST00000343060 THRBP10828 461 aa9.65□□□□□ -0.86
HOXA1-201ENST00000343060 HTR1EP28566 365 aa9.65□□□□□ -0.86
HOXA1-201ENST00000343060 SLC12A2P55011 1212 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms