RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 GAS6Q14393 721 aa13.87□□□□□ -0.19
PMS1-201ENST00000342075 UBXN2BQ14CS0 331 aa13.87□□□□□ -0.19
PMS1-201ENST00000342075 NEPROQ6NW34 567 aa13.87□□□□□ -0.19
PMS1-201ENST00000342075 BRAT1Q6PJG6 821 aa13.87□□□□□ -0.19
PMS1-201ENST00000342075 CNSTQ6PJW8 725 aa13.87□□□□□ -0.19
PMS1-201ENST00000342075 KDM1BQ8NB78 822 aa13.87□□□□□ -0.19
PMS1-201ENST00000342075 MZB1Q8WU39 189 aa13.87□□□□□ -0.19
PMS1-201ENST00000342075 PTCD2Q8WV60 388 aaKnown RBP13.87□□□□□ -0.19
PMS1-201ENST00000342075 FUBP1Q96AE4 644 aaKnown RBP13.87□□□□□ -0.19
PMS1-201ENST00000342075 SERAC1Q96JX3 654 aa13.87□□□□□ -0.19
PMS1-201ENST00000342075 ATP6V1G3Q96LB4 118 aa13.87□□□□□ -0.19
PMS1-201ENST00000342075 NDNQ99608 321 aa13.87□□□□□ -0.19
PMS1-201ENST00000342075 ACBD3Q9H3P7 528 aa13.87□□□□□ -0.19
PMS1-201ENST00000342075 CD248Q9HCU0 757 aa13.87□□□□□ -0.19
PMS1-201ENST00000342075 SORCS3Q9UPU3 1222 aa13.87□□□□□ -0.19
PMS1-201ENST00000342075 SDK1Q7Z5N4 2213 aa13.87□□□□□ -0.19
PMS1-201ENST00000342075 TCEA3O75764 348 aa13.87□□□□□ -0.19
PMS1-201ENST00000342075 ADRB3P13945 408 aa13.87□□□□□ -0.19
PMS1-201ENST00000342075 CST6Q15828 149 aa13.87□□□□□ -0.19
PMS1-201ENST00000342075 PREPLQ4J6C6 727 aaPredicted RBP13.87□□□□□ -0.19
PMS1-201ENST00000342075 PDPK2PQ6A1A2 396 aa13.87□□□□□ -0.19
PMS1-201ENST00000342075 FBXL19Q6PCT2 694 aa13.87□□□□□ -0.19
PMS1-201ENST00000342075 EXOC3L1Q86VI1 746 aa13.87□□□□□ -0.19
PMS1-201ENST00000342075 SLC26A11Q86WA9 606 aa13.87□□□□□ -0.19
PMS1-201ENST00000342075 STYXQ8WUJ0 223 aa13.87□□□□□ -0.19
PMS1-201ENST00000342075 PBXIP1Q96AQ6 731 aa13.87□□□□□ -0.19
PMS1-201ENST00000342075 TMEM109Q9BVC6 243 aa13.87□□□□□ -0.19
PMS1-201ENST00000342075 IL26Q9NPH9 171 aa13.87□□□□□ -0.19
PMS1-201ENST00000342075 FBXL21Q9UKT6 434 aa13.87□□□□□ -0.19
PMS1-201ENST00000342075 FAM50BQ9Y247 325 aa13.87□□□□□ -0.19
PMS1-201ENST00000342075 CRYL1Q9Y2S2 319 aa13.87□□□□□ -0.19
PMS1-201ENST00000342075 TRIM49D1C9J1S8 452 aa13.86□□□□□ -0.19
PMS1-201ENST00000342075 KRT15P19012 456 aa13.86□□□□□ -0.19
PMS1-201ENST00000342075 XPAP23025 273 aaPredicted RBP13.86□□□□□ -0.19
PMS1-201ENST00000342075 XIAPP98170 497 aa13.86□□□□□ -0.19
PMS1-201ENST00000342075 ACVR1Q04771 509 aa13.86□□□□□ -0.19
PMS1-201ENST00000342075 THOC5Q13769 683 aaKnown RBP13.86□□□□□ -0.19
PMS1-201ENST00000342075 ZNF460Q14592 562 aa13.86□□□□□ -0.19
PMS1-201ENST00000342075 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.86□□□□□ -0.19
PMS1-201ENST00000342075 Q6ZVL8 140 aa13.86□□□□□ -0.19
PMS1-201ENST00000342075 MARK2Q7KZI7 788 aaKnown RBP13.86□□□□□ -0.19
PMS1-201ENST00000342075 CMC1Q7Z7K0 106 aa13.86□□□□□ -0.19
PMS1-201ENST00000342075 FAM124AQ86V42 546 aa13.86□□□□□ -0.19
PMS1-201ENST00000342075 GABRG3Q99928 467 aa13.86□□□□□ -0.19
PMS1-201ENST00000342075 RSPH9Q9H1X1 276 aaPredicted RBP13.86□□□□□ -0.19
PMS1-201ENST00000342075 MTO1Q9Y2Z2 717 aaKnown RBP13.86□□□□□ -0.19
PMS1-201ENST00000342075 ZDBF2Q9HCK1 2354 aa13.86□□□□□ -0.19
PMS1-201ENST00000342075 TSPAN11A1L157 253 aa13.86□□□□□ -0.19
PMS1-201ENST00000342075 OPA1O60313 960 aa13.86□□□□□ -0.19
PMS1-201ENST00000342075 OR1I1O60431 355 aa13.86□□□□□ -0.19
PMS1-201ENST00000342075 SPAG7O75391 227 aa13.86□□□□□ -0.19
PMS1-201ENST00000342075 IVLP07476 585 aa13.86□□□□□ -0.19
PMS1-201ENST00000342075 GSTA2P09210 222 aa13.86□□□□□ -0.19
PMS1-201ENST00000342075 GM2AP17900 193 aa13.86□□□□□ -0.19
PMS1-201ENST00000342075 ITGB7P26010 798 aa13.86□□□□□ -0.19
PMS1-201ENST00000342075 MMP12P39900 470 aa13.86□□□□□ -0.19
PMS1-201ENST00000342075 RPL26P61254 145 aaKnown RBP13.86□□□□□ -0.19
PMS1-201ENST00000342075 HSP90B2PQ58FF3 399 aa13.86□□□□□ -0.19
PMS1-201ENST00000342075 ZRANB3Q5FWF4 1079 aa13.86□□□□□ -0.19
PMS1-201ENST00000342075 RBM20Q5T481 1227 aaKnown RBP13.86□□□□□ -0.19
PMS1-201ENST00000342075 TMPRSS6Q8IU80 811 aa13.86□□□□□ -0.19
PMS1-201ENST00000342075 ZNF687Q8N1G0 1237 aa13.86□□□□□ -0.19
PMS1-201ENST00000342075 TMIEQ8NEW7 156 aa13.86□□□□□ -0.19
PMS1-201ENST00000342075 OSBPL1AQ9BXW6 950 aa13.86□□□□□ -0.19
PMS1-201ENST00000342075 ROPN1BQ9BZX4 212 aaPredicted RBP13.86□□□□□ -0.19
PMS1-201ENST00000342075 ROPN1Q9HAT0 212 aaPredicted RBP13.86□□□□□ -0.19
PMS1-201ENST00000342075 MLXIPLQ9NP71 852 aa13.86□□□□□ -0.19
PMS1-201ENST00000342075 SUN2Q9UH99 717 aa13.86□□□□□ -0.19
PMS1-201ENST00000342075 RPL26L1Q9UNX3 145 aaKnown RBP13.86□□□□□ -0.19
PMS1-201ENST00000342075 PPIL1Q9Y3C6 166 aa13.86□□□□□ -0.19
PMS1-201ENST00000342075 IKBKGQ9Y6K9 419 aa13.86□□□□□ -0.19
PMS1-201ENST00000342075 PLXNB3Q9ULL4 1909 aa13.86□□□□□ -0.19
PMS1-201ENST00000342075 PAPSS2O95340 614 aaPredicted RBP13.85□□□□□ -0.19
PMS1-201ENST00000342075 CHRNB1P11230 501 aa13.85□□□□□ -0.19
PMS1-201ENST00000342075 ATP1A2P50993 1020 aa13.85□□□□□ -0.19
PMS1-201ENST00000342075 TAS2R38P59533 333 aa13.85□□□□□ -0.19
PMS1-201ENST00000342075 RPS14P62263 151 aaKnown RBP13.85□□□□□ -0.19
PMS1-201ENST00000342075 GRM3Q14832 879 aa13.85□□□□□ -0.19
PMS1-201ENST00000342075 PIP5KL1Q5T9C9 394 aa13.85□□□□□ -0.19
PMS1-201ENST00000342075 CILP2Q8IUL8 1156 aa13.85□□□□□ -0.19
PMS1-201ENST00000342075 OR4L1Q8NH43 312 aa13.85□□□□□ -0.19
PMS1-201ENST00000342075 PKP3Q9Y446 797 aa13.85□□□□□ -0.19
PMS1-201ENST00000342075 ZNF106Q9H2Y7 1883 aaKnown RBP13.85□□□□□ -0.19
PMS1-201ENST00000342075 PIKFYVEQ9Y2I7 2098 aa13.85□□□□□ -0.19
PMS1-201ENST00000342075 CD3EAPO15446 510 aaKnown RBP13.85□□□□□ -0.19
PMS1-201ENST00000342075 MMP20O60882 483 aa13.85□□□□□ -0.19
PMS1-201ENST00000342075 DNAJC6O75061 913 aa13.85□□□□□ -0.19
PMS1-201ENST00000342075 RNASEH2AO75792 299 aaKnown RBP13.85□□□□□ -0.19
PMS1-201ENST00000342075 PRAMEF1O95521 474 aa13.85□□□□□ -0.19
PMS1-201ENST00000342075 PAMP19021 973 aa13.85□□□□□ -0.19
PMS1-201ENST00000342075 FZD5Q13467 585 aa13.85□□□□□ -0.19
PMS1-201ENST00000342075 PUS10Q3MIT2 529 aaKnown RBP13.85□□□□□ -0.19
PMS1-201ENST00000342075 TNFAIP8L3Q5GJ75 292 aa13.85□□□□□ -0.19
PMS1-201ENST00000342075 SUGP1Q8IWZ8 645 aaKnown RBP13.85□□□□□ -0.19
PMS1-201ENST00000342075 MDM1Q8TC05 714 aa13.85□□□□□ -0.19
PMS1-201ENST00000342075 CDKL2Q92772 493 aa13.85□□□□□ -0.19
PMS1-201ENST00000342075 TLCD1Q96CP7 247 aa13.85□□□□□ -0.19
PMS1-201ENST00000342075 PGM2Q96G03 612 aa13.85□□□□□ -0.19
PMS1-201ENST00000342075 LYSMD1Q96S90 227 aa13.85□□□□□ -0.19
PMS1-201ENST00000342075 UNKQ9C0B0 810 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms