RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 SDHAF4Q5VUM1 108 aa14.83□□□□□ -0.04
RRP1B-201ENST00000340648 ZNF280DQ6N043 979 aa14.83□□□□□ -0.04
RRP1B-201ENST00000340648 CAND1Q86VP6 1230 aaKnown RBP14.83□□□□□ -0.04
RRP1B-201ENST00000340648 ROPN1LQ96C74 230 aa14.83□□□□□ -0.04
RRP1B-201ENST00000340648 ABHD16BQ9H3Z7 469 aa14.83□□□□□ -0.04
RRP1B-201ENST00000340648 TMPRSS4Q9NRS4 437 aa14.83□□□□□ -0.04
RRP1B-201ENST00000340648 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.83□□□□□ -0.04
RRP1B-201ENST00000340648 CICQ96RK0 1608 aaPredicted RBP14.83□□□□□ -0.04
RRP1B-201ENST00000340648 CXCL11O14625 94 aa14.83□□□□□ -0.04
RRP1B-201ENST00000340648 ALOX15P16050 662 aaPredicted RBP14.83□□□□□ -0.04
RRP1B-201ENST00000340648 PSEN2P49810 448 aa14.83□□□□□ -0.04
RRP1B-201ENST00000340648 MERTKQ12866 999 aa14.83□□□□□ -0.04
RRP1B-201ENST00000340648 MAP1SQ66K74 1059 aaPredicted RBP14.83□□□□□ -0.04
RRP1B-201ENST00000340648 C16orf59Q7L2K0 433 aa14.83□□□□□ -0.04
RRP1B-201ENST00000340648 CLHC1Q8NHS4 586 aa14.83□□□□□ -0.04
RRP1B-201ENST00000340648 OR52E6Q96RD3 313 aa14.83□□□□□ -0.04
RRP1B-201ENST00000340648 MLPHQ9BV36 600 aaPredicted RBP14.83□□□□□ -0.04
RRP1B-201ENST00000340648 KAT6AQ92794 2004 aa14.82□□□□□ -0.04
RRP1B-201ENST00000340648 TRIM43BA6NCK2 446 aa14.82□□□□□ -0.04
RRP1B-201ENST00000340648 TOR1BO14657 336 aa14.82□□□□□ -0.04
RRP1B-201ENST00000340648 MTHFD1P11586 935 aaKnown RBP14.82□□□□□ -0.04
RRP1B-201ENST00000340648 IL12AP29459 219 aa14.82□□□□□ -0.04
RRP1B-201ENST00000340648 SLC1A2P43004 574 aa14.82□□□□□ -0.04
RRP1B-201ENST00000340648 DCLRE1AQ6PJP8 1040 aa14.82□□□□□ -0.04
RRP1B-201ENST00000340648 ANKS3Q6ZW76 656 aa14.82□□□□□ -0.04
RRP1B-201ENST00000340648 SPATA19Q7Z5L4 167 aa14.82□□□□□ -0.04
RRP1B-201ENST00000340648 TOP6BLQ8N6T0 577 aa14.82□□□□□ -0.04
RRP1B-201ENST00000340648 COQ7Q99807 217 aa14.82□□□□□ -0.04
RRP1B-201ENST00000340648 SMPD4Q9NXE4 827 aa14.82□□□□□ -0.04
RRP1B-201ENST00000340648 PADI4Q9UM07 663 aa14.82□□□□□ -0.04
RRP1B-201ENST00000340648 FAM220BPB1ANY3 271 aa14.82□□□□□ -0.04
RRP1B-201ENST00000340648 FAM25AB3EWG3 89 aa14.82□□□□□ -0.04
RRP1B-201ENST00000340648 FAM25CB3EWG5 89 aa14.82□□□□□ -0.04
RRP1B-201ENST00000340648 FAM25GB3EWG6 89 aa14.82□□□□□ -0.04
RRP1B-201ENST00000340648 POLD2P49005 469 aa14.82□□□□□ -0.04
RRP1B-201ENST00000340648 BEX3Q00994 111 aa14.82□□□□□ -0.04
RRP1B-201ENST00000340648 ACAP2Q15057 778 aa14.82□□□□□ -0.04
RRP1B-201ENST00000340648 TSNQ15631 228 aaKnown RBP14.82□□□□□ -0.04
RRP1B-201ENST00000340648 PLEKHG4Q58EX7 1191 aa14.82□□□□□ -0.04
RRP1B-201ENST00000340648 CDCA2Q69YH5 1023 aaPredicted RBP14.82□□□□□ -0.04
RRP1B-201ENST00000340648 TXNDC11Q6PKC3 985 aa14.82□□□□□ -0.04
RRP1B-201ENST00000340648 CASP12Q6UXS9 341 aa14.82□□□□□ -0.04
RRP1B-201ENST00000340648 RNF19BQ6ZMZ0 732 aa14.82□□□□□ -0.04
RRP1B-201ENST00000340648 HM13Q8TCT9 377 aa14.82□□□□□ -0.04
RRP1B-201ENST00000340648 HBEGFQ99075 208 aa14.82□□□□□ -0.04
RRP1B-201ENST00000340648 GPATCH1Q9BRR8 931 aaKnown RBP14.82□□□□□ -0.04
RRP1B-201ENST00000340648 DYRK4Q9NR20 520 aa14.82□□□□□ -0.04
RRP1B-201ENST00000340648 RASSF1Q9NS23 344 aa14.82□□□□□ -0.04
RRP1B-201ENST00000340648 C10orf71Q711Q0 1435 aa14.82□□□□□ -0.04
RRP1B-201ENST00000340648 TSPAN1O60635 241 aa14.82□□□□□ -0.04
RRP1B-201ENST00000340648 LRATO95237 230 aa14.82□□□□□ -0.04
RRP1B-201ENST00000340648 ALDH1A1P00352 501 aa14.82□□□□□ -0.04
RRP1B-201ENST00000340648 ALDH4A1P30038 563 aa14.82□□□□□ -0.04
RRP1B-201ENST00000340648 GPC1P35052 558 aa14.82□□□□□ -0.04
RRP1B-201ENST00000340648 IL12RB1P42701 662 aa14.82□□□□□ -0.04
RRP1B-201ENST00000340648 CCR10P46092 362 aa14.82□□□□□ -0.04
RRP1B-201ENST00000340648 PIK3CGP48736 1102 aa14.82□□□□□ -0.04
RRP1B-201ENST00000340648 GLUD2P49448 558 aa14.82□□□□□ -0.04
RRP1B-201ENST00000340648 BNIP3Q12983 259 aa14.82□□□□□ -0.04
RRP1B-201ENST00000340648 HERC3Q15034 1050 aa14.82□□□□□ -0.04
RRP1B-201ENST00000340648 OGFOD2Q6N063 350 aa14.82□□□□□ -0.04
RRP1B-201ENST00000340648 CYP4Z1Q86W10 505 aa14.82□□□□□ -0.04
RRP1B-201ENST00000340648 MFHAS1Q9Y4C4 1052 aa14.82□□□□□ -0.04
RRP1B-201ENST00000340648 SNPHO15079 494 aa14.82□□□□□ -0.04
RRP1B-201ENST00000340648 SMIM10L2AP0DMW4 78 aa14.82□□□□□ -0.04
RRP1B-201ENST00000340648 SMIM10L2BP0DMW5 78 aa14.82□□□□□ -0.04
RRP1B-201ENST00000340648 ZNF12P17014 697 aa14.82□□□□□ -0.04
RRP1B-201ENST00000340648 RPL26P61254 145 aaKnown RBP14.82□□□□□ -0.04
RRP1B-201ENST00000340648 CNSTQ6PJW8 725 aa14.82□□□□□ -0.04
RRP1B-201ENST00000340648 PLEKHM3Q6ZWE6 761 aa14.82□□□□□ -0.04
RRP1B-201ENST00000340648 PQLC3Q8N755 202 aa14.82□□□□□ -0.04
RRP1B-201ENST00000340648 FBXO27Q8NI29 283 aa14.82□□□□□ -0.04
RRP1B-201ENST00000340648 AGO3Q9H9G7 860 aaKnown RBP14.82□□□□□ -0.04
RRP1B-201ENST00000340648 TRPM5Q9NZQ8 1165 aa14.82□□□□□ -0.04
RRP1B-201ENST00000340648 DERAQ9Y315 318 aa14.82□□□□□ -0.04
RRP1B-201ENST00000340648 C4AP0C0L4 1744 aa14.81□□□□□ -0.04
RRP1B-201ENST00000340648 C4BP0C0L5 1744 aa14.81□□□□□ -0.04
RRP1B-201ENST00000340648 SCN11AQ9UI33 1791 aa14.81□□□□□ -0.04
RRP1B-201ENST00000340648 SNTNA6NMZ2 147 aa14.81□□□□□ -0.04
RRP1B-201ENST00000340648 E7ESA3 106 aa14.81□□□□□ -0.04
RRP1B-201ENST00000340648 H3BMM5 538 aa14.81□□□□□ -0.04
RRP1B-201ENST00000340648 TTPAP49638 278 aa14.81□□□□□ -0.04
RRP1B-201ENST00000340648 KPNA1P52294 538 aaPredicted RBP14.81□□□□□ -0.04
RRP1B-201ENST00000340648 ACSM2AQ08AH3 577 aa14.81□□□□□ -0.04
RRP1B-201ENST00000340648 CCNIQ14094 377 aa14.81□□□□□ -0.04
RRP1B-201ENST00000340648 ACSM2BQ68CK6 577 aa14.81□□□□□ -0.04
RRP1B-201ENST00000340648 ZCCHC8Q6NZY4 707 aaKnown RBP14.81□□□□□ -0.04
RRP1B-201ENST00000340648 AKAP14Q86UN6 197 aa14.81□□□□□ -0.04
RRP1B-201ENST00000340648 KRT73Q86Y46 540 aa14.81□□□□□ -0.04
RRP1B-201ENST00000340648 LRRC49Q8IUZ0 686 aa14.81□□□□□ -0.04
RRP1B-201ENST00000340648 STK40Q8N2I9 435 aa14.81□□□□□ -0.04
RRP1B-201ENST00000340648 PROX1Q92786 737 aa14.81□□□□□ -0.04
RRP1B-201ENST00000340648 OMA1Q96E52 524 aa14.81□□□□□ -0.04
RRP1B-201ENST00000340648 TBATAQ96M53 351 aa14.81□□□□□ -0.04
RRP1B-201ENST00000340648 OAZ3Q9UMX2 235 aa14.81□□□□□ -0.04
RRP1B-201ENST00000340648 PTCH2Q9Y6C5 1203 aa14.81□□□□□ -0.04
RRP1B-201ENST00000340648 OTCP00480 354 aa14.81□□□□□ -0.04
RRP1B-201ENST00000340648 DGKAP23743 735 aa14.81□□□□□ -0.04
RRP1B-201ENST00000340648 ICAM3P32942 547 aa14.81□□□□□ -0.04
RRP1B-201ENST00000340648 CPSF6Q16630 551 aaKnown RBP eCLIP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms