RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 PI4K2AQ9BTU6 479 aa9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 FNIP2Q9P278 1114 aa9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 OPTCQ9UBM4 332 aa9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 KCNE2Q9Y6J6 123 aa9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 ZNFX1Q9P2E3 1918 aaKnown RBP9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 SPATA31A5Q5VU36 1347 aa9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 SPATA31A7Q8IWB4 1347 aa9.66□□□□□ -0.86
PTCHD4-201ENST00000339488 MAGEB16A2A368 324 aa9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 F8VP50 259 aa9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 MYL4P12829 197 aa9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 IMPDH1P20839 514 aa9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 AZGP1P25311 298 aaKnown RBP9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 POU1F1P28069 291 aa9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 SHMT1P34896 483 aa9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 GRIK1P39086 918 aa9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 IL12RB1P42701 662 aa9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 APLP1P51693 650 aa9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 DAB2P98082 770 aa9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 PRPSAP1Q14558 356 aa9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 ZNF181Q2M3W8 571 aa9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 TYW3Q6IPR3 259 aaKnown RBP9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 ALKBH2Q6NS38 261 aa9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 GOT1L1Q8NHS2 421 aaPredicted RBP9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 LRRC39Q96DD0 335 aa9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 SLC45A3Q96JT2 553 aa9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 SLC6A17Q9H1V8 727 aa9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 ZFP14Q9HCL3 533 aa9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 TLR9Q9NR96 1032 aa9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 MTMR4Q9NYA4 1195 aa9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 MAP3K20Q9NYL2 800 aaKnown RBP9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 RBAKQ9NYW8 714 aaPredicted RBP9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 EVLQ9UI08 416 aaPredicted RBP9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 SCAF8Q9UPN6 1271 aaKnown RBP9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 GLI3P10071 1580 aa9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 MAST2Q6P0Q8 1798 aa9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 IFNA14P01570 189 aa9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 APOA1P02647 267 aa9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 ALBP02768 609 aa9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 LTFP02788 710 aa9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 ALDOAP04075 364 aaKnown RBP9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 CYBBP04839 570 aa9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 HOXD4P09016 255 aaPredicted RBP9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 CCNYL3P0C7X3 344 aa9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 IL2RBP14784 551 aa9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 RPL17P18621 184 aaKnown RBP9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 TNNI3P19429 210 aa9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 LIG4P49917 911 aa9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 MFAP3P55082 362 aa9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 YWHAZP63104 245 aaKnown RBP9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 CRADDP78560 199 aa9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 TEKQ02763 1124 aa9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 PPP1R8Q12972 351 aaKnown RBP9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 SGCAQ16586 387 aa9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 LRRC26Q2I0M4 334 aa9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 CTU2Q2VPK5 515 aaKnown RBP9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 SOWAHCQ53LP3 525 aaPredicted RBP9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 DENND5AQ6IQ26 1287 aa9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 BRAT1Q6PJG6 821 aa9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 ZNF677Q86XU0 584 aa9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 SPNS2Q8IVW8 549 aa9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 FAM71AQ8IYT1 594 aa9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 ANKRD13AQ8IZ07 590 aa9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 OR8H2Q8N162 312 aa9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 OR9I1Q8NGQ6 314 aa9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 DEPDC1BQ8WUY9 529 aa9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 SLC5A11Q8WWX8 675 aa9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 BTN2A3PQ96KV6 586 aa9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 MAGEB10Q96LZ2 347 aaPredicted RBP9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 TEKT5Q96M29 485 aa9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 UHRF1Q96T88 793 aaPredicted RBP9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 STRA6Q9BX79 667 aa9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 BCL2L14Q9BZR8 327 aa9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 VPS33BQ9H267 617 aa9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 RNF167Q9H6Y7 350 aa9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 TOPORSQ9NS56 1045 aaPredicted RBP9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 CCDC167Q9P0B6 97 aa9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 VPS28Q9UK41 221 aa9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 U3KQV3 271 aa9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 ADAMTS7Q9UKP4 1686 aa9.65□□□□□ -0.86
PTCHD4-201ENST00000339488 DHRS12A0PJE2 317 aa9.65□□□□□ -0.87
PTCHD4-201ENST00000339488 MEIOCA2RUB1 952 aa9.65□□□□□ -0.87
PTCHD4-201ENST00000339488 AGAP5A6NIR3 686 aa9.65□□□□□ -0.87
PTCHD4-201ENST00000339488 TLR3O15455 904 aaKnown RBP9.65□□□□□ -0.87
PTCHD4-201ENST00000339488 GABARAPO95166 117 aa9.65□□□□□ -0.87
PTCHD4-201ENST00000339488 RASAL1O95294 804 aa9.65□□□□□ -0.87
PTCHD4-201ENST00000339488 C2P06681 752 aa9.65□□□□□ -0.87
PTCHD4-201ENST00000339488 HSMCR30P0CW71 290 aa9.65□□□□□ -0.87
PTCHD4-201ENST00000339488 NCK1P16333 377 aa9.65□□□□□ -0.87
PTCHD4-201ENST00000339488 KPNA2P52292 529 aaKnown RBP9.65□□□□□ -0.87
PTCHD4-201ENST00000339488 MAP2K6P52564 334 aa9.65□□□□□ -0.87
PTCHD4-201ENST00000339488 PPIL2Q13356 520 aa9.65□□□□□ -0.87
PTCHD4-201ENST00000339488 NFE2L1Q14494 772 aa9.65□□□□□ -0.87
PTCHD4-201ENST00000339488 PUM3Q15397 648 aaKnown RBP9.65□□□□□ -0.87
PTCHD4-201ENST00000339488 GPAT3Q53EU6 434 aa9.65□□□□□ -0.87
PTCHD4-201ENST00000339488 BRDTQ58F21 947 aaPredicted RBP9.65□□□□□ -0.87
PTCHD4-201ENST00000339488 PLA2G4FQ68DD2 849 aa9.65□□□□□ -0.87
PTCHD4-201ENST00000339488 ALG1LQ6GMV1 187 aa9.65□□□□□ -0.87
PTCHD4-201ENST00000339488 NPNTQ6UXI9 565 aa9.65□□□□□ -0.87
PTCHD4-201ENST00000339488 PRSS42Q7Z5A4 293 aa9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms