RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 RPF2Q9H7B2 306 aaKnown RBP18.8■□□□□ 0.6
PSPC1-201ENST00000338910 CATSPERBQ9H7T0 1116 aa18.8■□□□□ 0.6
PSPC1-201ENST00000338910 GMIPQ9P107 970 aa18.8■□□□□ 0.6
PSPC1-201ENST00000338910 OGDHLQ9ULD0 1010 aa18.8■□□□□ 0.6
PSPC1-201ENST00000338910 CCDC78A2IDD5 438 aa18.8■□□□□ 0.6
PSPC1-201ENST00000338910 HEATR9A2RTY3 570 aa18.8■□□□□ 0.6
PSPC1-201ENST00000338910 ERI2A8K979 691 aaKnown RBP18.8■□□□□ 0.6
PSPC1-201ENST00000338910 E9PAM4 449 aa18.8■□□□□ 0.6
PSPC1-201ENST00000338910 AKAP10O43572 662 aa18.8■□□□□ 0.6
PSPC1-201ENST00000338910 TIMM44O43615 452 aa18.8■□□□□ 0.6
PSPC1-201ENST00000338910 TBX18O95935 607 aa18.8■□□□□ 0.6
PSPC1-201ENST00000338910 PRAMEP78395 509 aa18.8■□□□□ 0.6
PSPC1-201ENST00000338910 RALGDSQ12967 914 aa18.8■□□□□ 0.6
PSPC1-201ENST00000338910 LRP8Q14114 963 aa18.8■□□□□ 0.6
PSPC1-201ENST00000338910 ARTNQ5T4W7 220 aa18.8■□□□□ 0.6
PSPC1-201ENST00000338910 KDM1BQ8NB78 822 aa18.8■□□□□ 0.6
PSPC1-201ENST00000338910 ZNF420Q8TAQ5 688 aaPredicted RBP18.8■□□□□ 0.6
PSPC1-201ENST00000338910 ZNF419Q96HQ0 510 aaPredicted RBP18.8■□□□□ 0.6
PSPC1-201ENST00000338910 FUBP3Q96I24 572 aaKnown RBP eCLIP18.8■□□□□ 0.61e-7■■■□□ 16.8
PSPC1-201ENST00000338910 PLEKHA8Q96JA3 519 aa18.8■□□□□ 0.6
PSPC1-201ENST00000338910 SERPINB11Q96P15 392 aa18.8■□□□□ 0.6
PSPC1-201ENST00000338910 DOLKQ9UPQ8 538 aa18.8■□□□□ 0.6
PSPC1-201ENST00000338910 H3BMQ9 156 aa18.79■□□□□ 0.6
PSPC1-201ENST00000338910 FBP2O00757 339 aa18.79■□□□□ 0.6
PSPC1-201ENST00000338910 SYN3O14994 580 aa18.79■□□□□ 0.6
PSPC1-201ENST00000338910 MT-CYBP00156 380 aaPredicted RBP18.79■□□□□ 0.6
PSPC1-201ENST00000338910 GNAO1P09471 354 aa18.79■□□□□ 0.6
PSPC1-201ENST00000338910 BMP2P12643 396 aa18.79■□□□□ 0.6
PSPC1-201ENST00000338910 CCNCP24863 283 aa18.79■□□□□ 0.6
PSPC1-201ENST00000338910 SLC11A1P49279 550 aa18.79■□□□□ 0.6
PSPC1-201ENST00000338910 FRG1Q14331 258 aaKnown RBP18.79■□□□□ 0.6
PSPC1-201ENST00000338910 PRPSAP1Q14558 356 aa18.79■□□□□ 0.6
PSPC1-201ENST00000338910 C6orf10Q5SRN2 563 aa18.79■□□□□ 0.6
PSPC1-201ENST00000338910 MANEALQ5VSG8 457 aa18.79■□□□□ 0.6
PSPC1-201ENST00000338910 DEFB128Q7Z7B8 93 aa18.79■□□□□ 0.6
PSPC1-201ENST00000338910 CRIPAKQ8N1N5 446 aa18.79■□□□□ 0.6
PSPC1-201ENST00000338910 ZNF786Q8N393 782 aa18.79■□□□□ 0.6
PSPC1-201ENST00000338910 C8orf48Q96LL4 319 aa18.79■□□□□ 0.6
PSPC1-201ENST00000338910 COG8Q96MW5 612 aa18.79■□□□□ 0.6
PSPC1-201ENST00000338910 EFHD1Q9BUP0 239 aa18.79■□□□□ 0.6
PSPC1-201ENST00000338910 NPLQ9BXD5 320 aaPredicted RBP18.79■□□□□ 0.6
PSPC1-201ENST00000338910 FBXO44Q9H4M3 255 aa18.79■□□□□ 0.6
PSPC1-201ENST00000338910 CXorf21Q9HAI6 301 aa18.79■□□□□ 0.6
PSPC1-201ENST00000338910 MARCH5Q9NX47 278 aa18.79■□□□□ 0.6
PSPC1-201ENST00000338910 CACNA2D2Q9NY47 1150 aa18.79■□□□□ 0.6
PSPC1-201ENST00000338910 SELENONQ9NZV5 590 aa18.79■□□□□ 0.6
PSPC1-201ENST00000338910 CD300AQ9UGN4 299 aa18.79■□□□□ 0.6
PSPC1-201ENST00000338910 COL4A4P53420 1690 aaPredicted RBP18.79■□□□□ 0.6
PSPC1-201ENST00000338910 DLGAP1O14490 977 aa18.79■□□□□ 0.6
PSPC1-201ENST00000338910 FGF10O15520 208 aaPredicted RBP18.79■□□□□ 0.6
PSPC1-201ENST00000338910 MAFKO60675 156 aa18.79■□□□□ 0.6
PSPC1-201ENST00000338910 OCM2P0CE71 109 aa18.79■□□□□ 0.6
PSPC1-201ENST00000338910 OCMP0CE72 109 aaPredicted RBP18.79■□□□□ 0.6
PSPC1-201ENST00000338910 MLLT6P55198 1093 aaPredicted RBP18.79■□□□□ 0.6
PSPC1-201ENST00000338910 PRKCQQ04759 706 aa18.79■□□□□ 0.6
PSPC1-201ENST00000338910 EFEMP1Q12805 493 aa18.79■□□□□ 0.6
PSPC1-201ENST00000338910 IRAK1BP1Q5VVH5 260 aa18.79■□□□□ 0.6
PSPC1-201ENST00000338910 TTC33Q6PID6 262 aaPredicted RBP18.79■□□□□ 0.6
PSPC1-201ENST00000338910 CYP2R1Q6VVX0 501 aa18.79■□□□□ 0.6
PSPC1-201ENST00000338910 PELI3Q8N2H9 469 aa18.79■□□□□ 0.6
PSPC1-201ENST00000338910 MFSD2AQ8NA29 543 aa18.79■□□□□ 0.6
PSPC1-201ENST00000338910 TNIP2Q8NFZ5 429 aa18.79■□□□□ 0.6
PSPC1-201ENST00000338910 HMGCLL1Q8TB92 370 aa18.79■□□□□ 0.6
PSPC1-201ENST00000338910 VPS39Q96JC1 886 aa18.79■□□□□ 0.6
PSPC1-201ENST00000338910 SLX1AQ9BQ83 275 aa18.79■□□□□ 0.6
PSPC1-201ENST00000338910 TRIM43BA6NCK2 446 aa18.78■□□□□ 0.6
PSPC1-201ENST00000338910 SDHDO14521 159 aa18.78■□□□□ 0.6
PSPC1-201ENST00000338910 TIPRLO75663 272 aa18.78■□□□□ 0.6
PSPC1-201ENST00000338910 FUCA1P04066 466 aa18.78■□□□□ 0.6
PSPC1-201ENST00000338910 CPB1P15086 417 aa18.78■□□□□ 0.6
PSPC1-201ENST00000338910 MYF6P23409 242 aa18.78■□□□□ 0.6
PSPC1-201ENST00000338910 DCKP27707 260 aa18.78■□□□□ 0.6
PSPC1-201ENST00000338910 CSE1LP55060 971 aaKnown RBP18.78■□□□□ 0.6
PSPC1-201ENST00000338910 C21orf59P57076 290 aa18.78■□□□□ 0.6
PSPC1-201ENST00000338910 NANOGP8Q6NSW7 305 aa18.78■□□□□ 0.6
PSPC1-201ENST00000338910 TMEM173Q86WV6 379 aaPredicted RBP18.78■□□□□ 0.6
PSPC1-201ENST00000338910 DDHD1Q8NEL9 900 aa18.78■□□□□ 0.6
PSPC1-201ENST00000338910 PBXIP1Q96AQ6 731 aa18.78■□□□□ 0.6
PSPC1-201ENST00000338910 TSGA13Q96PP4 275 aa18.78■□□□□ 0.6
PSPC1-201ENST00000338910 SMOXQ9NWM0 555 aa18.78■□□□□ 0.6
PSPC1-201ENST00000338910 PATJQ8NI35 1801 aa18.78■□□□□ 0.6
PSPC1-201ENST00000338910 TRIM64BA6NI03 449 aa18.78■□□□□ 0.6
PSPC1-201ENST00000338910 TBKBP1A7MCY6 615 aa18.78■□□□□ 0.6
PSPC1-201ENST00000338910 TMEM233B4DJY2 109 aa18.78■□□□□ 0.6
PSPC1-201ENST00000338910 TARM1B6A8C7 271 aa18.78■□□□□ 0.6
PSPC1-201ENST00000338910 ZBTB11O95625 1053 aaPredicted RBP18.78■□□□□ 0.6
PSPC1-201ENST00000338910 HOXC13P31276 330 aa18.78■□□□□ 0.6
PSPC1-201ENST00000338910 BCAP31P51572 246 aa18.78■□□□□ 0.6
PSPC1-201ENST00000338910 STX5Q13190 355 aa18.78■□□□□ 0.6
PSPC1-201ENST00000338910 PIK3R6Q5UE93 754 aa18.78■□□□□ 0.6
PSPC1-201ENST00000338910 RSPO2Q6UXX9 243 aaPredicted RBP18.78■□□□□ 0.6
PSPC1-201ENST00000338910 MIB1Q86YT6 1006 aa18.78■□□□□ 0.6
PSPC1-201ENST00000338910 NPAS4Q8IUM7 802 aa18.78■□□□□ 0.6
PSPC1-201ENST00000338910 STYXQ8WUJ0 223 aa18.78■□□□□ 0.6
PSPC1-201ENST00000338910 PPWD1Q96BP3 646 aaKnown RBP18.78■□□□□ 0.6
PSPC1-201ENST00000338910 SPAG4Q9NPE6 437 aa18.78■□□□□ 0.6
PSPC1-201ENST00000338910 TLR6Q9Y2C9 796 aa18.78■□□□□ 0.6
PSPC1-201ENST00000338910 ANKRD6Q9Y2G4 727 aa18.78■□□□□ 0.6
PSPC1-201ENST00000338910 A0A1W2PPW3 197 aa18.77■□□□□ 0.6
PSPC1-201ENST00000338910 SOBPA7XYQ1 873 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms