RNA–Protein interactions for RNA: ENST00000338458.8

ARHGEF3-202, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF3, Length 3,639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-202ENST00000338458 SIN3BO75182 1162 aa10.09□□□□□ -0.79
ARHGEF3-202ENST00000338458 NCF1P14598 390 aaPredicted RBP10.09□□□□□ -0.79
ARHGEF3-202ENST00000338458 GRK2P25098 689 aa10.09□□□□□ -0.79
ARHGEF3-202ENST00000338458 PDCD2Q16342 344 aaPredicted RBP10.09□□□□□ -0.79
ARHGEF3-202ENST00000338458 TTC31Q49AM3 519 aaPredicted RBP10.09□□□□□ -0.79
ARHGEF3-202ENST00000338458 INO80DQ53TQ3 878 aaPredicted RBP10.09□□□□□ -0.79
ARHGEF3-202ENST00000338458 ZYG11AQ6WRX3 759 aa10.09□□□□□ -0.79
ARHGEF3-202ENST00000338458 UBE2Q1Q7Z7E8 422 aa10.09□□□□□ -0.79
ARHGEF3-202ENST00000338458 POU5F2Q8N7G0 328 aa10.09□□□□□ -0.79
ARHGEF3-202ENST00000338458 MAPK15Q8TD08 544 aa10.09□□□□□ -0.79
ARHGEF3-202ENST00000338458 CIPCQ9C0C6 399 aa10.09□□□□□ -0.79
ARHGEF3-202ENST00000338458 WWP1Q9H0M0 922 aa10.09□□□□□ -0.79
ARHGEF3-202ENST00000338458 MRPL46Q9H2W6 279 aaKnown RBP10.09□□□□□ -0.79
ARHGEF3-202ENST00000338458 TXLNGQ9NUQ3 528 aa10.09□□□□□ -0.79
ARHGEF3-202ENST00000338458 NLE1Q9NVX2 485 aaPredicted RBP10.09□□□□□ -0.79
ARHGEF3-202ENST00000338458 KCNK4Q9NYG8 393 aa10.09□□□□□ -0.79
ARHGEF3-202ENST00000338458 GTSE1Q9NYZ3 720 aa10.09□□□□□ -0.79
ARHGEF3-202ENST00000338458 ARHGAP26Q9UNA1 814 aa10.09□□□□□ -0.79
ARHGEF3-202ENST00000338458 IRAK3Q9Y616 596 aa10.09□□□□□ -0.79
ARHGEF3-202ENST00000338458 RFXAPO00287 272 aa10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 NIPSNAP2O75323 286 aa10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 DNAJC8O75937 253 aaPredicted RBP10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 LTA4HP09960 611 aaKnown RBP10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 NQO1P15559 274 aaKnown RBP10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 UGT1A6P19224 532 aa10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 UGT1A1P22309 533 aa10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 UGT1A4P22310 534 aa10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 UGT1A3P35503 534 aa10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 UGT1A5P35504 534 aa10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 STC1P52823 247 aa10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 Q6ZVU0 165 aa10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 TSPAN33Q86UF1 283 aa10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 TREML1Q86YW5 311 aa10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 FIBINQ8TAL6 211 aa10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 SP7Q8TDD2 431 aaPredicted RBP10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 SKA1Q96BD8 255 aa10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 NUF2Q9BZD4 464 aa10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 ARIH1Q9Y4X5 557 aaPredicted RBP10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 GFRA2O00451 464 aa10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 LATS1O95835 1130 aa10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 UGT2B4P06133 528 aa10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 SRCP12931 536 aa10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 ARSAP15289 507 aa10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 CHRM3P20309 590 aa10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 NRIP1P48552 1158 aa10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 SHHQ15465 462 aa10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 AGAP9Q5VTM2 703 aa10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 LIPMQ5VYY2 423 aa10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 NXNQ6DKJ4 435 aa10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 CYB5D1Q6P9G0 228 aa10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 ZSWIM9Q86XI8 627 aa10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 SCG3Q8WXD2 468 aaKnown RBP10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 SMG7Q92540 1137 aaKnown RBP10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 MTIF3Q9H2K0 278 aaKnown RBP10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 COG4Q9H9E3 785 aa10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 ZDHHC4Q9NPG8 344 aa10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 MAFFQ9ULX9 164 aa10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 APOBEC2Q9Y235 224 aaKnown RBP10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 PKP3Q9Y446 797 aa10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 ZNF711Q9Y462 761 aa10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 DENND4CQ5VZ89 1909 aa10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 LRRC14BA6NHZ5 514 aa10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 PRR5-ARHGAP8B1AHC4 643 aa10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 XYLBO75191 536 aa10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 SKAP2O75563 359 aaPredicted RBP10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 ESRRAP11474 423 aaPredicted RBP10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 EPHA3P29320 983 aa10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 CDH13P55290 713 aa10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 ARHGAP8P85298 464 aa10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 NSUN2Q08J23 767 aaKnown RBP eCLIP10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 SLC9B1Q4ZJI4 515 aa10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 TCEAL5Q5H9L2 206 aa10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 KLC3Q6P597 504 aa10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 PAQR3Q6TCH7 311 aa10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 CHST14Q8NCH0 376 aa10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 ZNF398Q8TD17 642 aa10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 IRF7Q92985 503 aa10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 ACDQ96AP0 544 aa10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 TSPAN17Q96FV3 270 aa10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 MARK4Q96L34 752 aa10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 GPR21Q99679 349 aa10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 UTP6Q9NYH9 597 aaKnown RBP10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 ZDHHC2Q9UIJ5 367 aa10.08□□□□□ -0.8
ARHGEF3-202ENST00000338458 A0A087X1B8 175 aa10.07□□□□□ -0.8
ARHGEF3-202ENST00000338458 LOC100653049A0A140TA62 436 aa10.07□□□□□ -0.8
ARHGEF3-202ENST00000338458 KRT34O76011 436 aa10.07□□□□□ -0.8
ARHGEF3-202ENST00000338458 PGLSO95336 258 aa10.07□□□□□ -0.8
ARHGEF3-202ENST00000338458 IGSF6O95976 241 aa10.07□□□□□ -0.8
ARHGEF3-202ENST00000338458 JUNP05412 331 aaKnown RBP10.07□□□□□ -0.8
ARHGEF3-202ENST00000338458 CA5AP35218 305 aa10.07□□□□□ -0.8
ARHGEF3-202ENST00000338458 ELF3P78545 371 aaPredicted RBP10.07□□□□□ -0.8
ARHGEF3-202ENST00000338458 MXRA7P84157 204 aa10.07□□□□□ -0.8
ARHGEF3-202ENST00000338458 PEX6Q13608 980 aa10.07□□□□□ -0.8
ARHGEF3-202ENST00000338458 AFTPHQ6ULP2 937 aa10.07□□□□□ -0.8
ARHGEF3-202ENST00000338458 ZNF783Q6ZMS7 281 aa10.07□□□□□ -0.8
ARHGEF3-202ENST00000338458 DPY19L3Q6ZPD9 716 aa10.07□□□□□ -0.8
ARHGEF3-202ENST00000338458 TRIM67Q6ZTA4 783 aa10.07□□□□□ -0.8
ARHGEF3-202ENST00000338458 RAB3IL1Q8TBN0 382 aa10.07□□□□□ -0.8
ARHGEF3-202ENST00000338458 GDPD5Q8WTR4 605 aa10.07□□□□□ -0.8
ARHGEF3-202ENST00000338458 PTERQ96BW5 349 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms