RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 PPM1HQ9ULR3 514 aa14.74□□□□□ -0.05
CDK5RAP3-201ENST00000338399 UPK3BL1B0FP48 263 aa14.74□□□□□ -0.05
CDK5RAP3-201ENST00000338399 UPK3BL2E5RIL1 263 aa14.74□□□□□ -0.05
CDK5RAP3-201ENST00000338399 TPP1O14773 563 aa14.74□□□□□ -0.05
CDK5RAP3-201ENST00000338399 ALDOAP04075 364 aaKnown RBP14.74□□□□□ -0.05
CDK5RAP3-201ENST00000338399 CHN1P15882 459 aa14.74□□□□□ -0.05
CDK5RAP3-201ENST00000338399 LHCGRP22888 699 aa14.74□□□□□ -0.05
CDK5RAP3-201ENST00000338399 MC4RP32245 332 aa14.74□□□□□ -0.05
CDK5RAP3-201ENST00000338399 KIR2DL1P43626 348 aaPredicted RBP14.74□□□□□ -0.05
CDK5RAP3-201ENST00000338399 LEPRP48357 1165 aaKnown RBP14.74□□□□□ -0.05
CDK5RAP3-201ENST00000338399 CD151P48509 253 aa14.74□□□□□ -0.05
CDK5RAP3-201ENST00000338399 METAP1P53582 386 aa14.74□□□□□ -0.05
CDK5RAP3-201ENST00000338399 DNAJC3Q13217 504 aa14.74□□□□□ -0.05
CDK5RAP3-201ENST00000338399 PEX6Q13608 980 aa14.74□□□□□ -0.05
CDK5RAP3-201ENST00000338399 SEMA3AQ14563 771 aa14.74□□□□□ -0.05
CDK5RAP3-201ENST00000338399 FASTKD1Q53R41 847 aaKnown RBP14.74□□□□□ -0.05
CDK5RAP3-201ENST00000338399 MRNIPQ6NTE8 343 aa14.74□□□□□ -0.05
CDK5RAP3-201ENST00000338399 ANKRD42Q8N9B4 389 aa14.74□□□□□ -0.05
CDK5RAP3-201ENST00000338399 ACVR1CQ8NER5 493 aa14.74□□□□□ -0.05
CDK5RAP3-201ENST00000338399 TMIEQ8NEW7 156 aa14.74□□□□□ -0.05
CDK5RAP3-201ENST00000338399 GPR150Q8NGU9 434 aa14.74□□□□□ -0.05
CDK5RAP3-201ENST00000338399 HCAR2Q8TDS4 363 aa14.74□□□□□ -0.05
CDK5RAP3-201ENST00000338399 C8orf33Q9H7E9 229 aaPredicted RBP14.74□□□□□ -0.05
CDK5RAP3-201ENST00000338399 F5P12259 2224 aa14.73□□□□□ -0.05
CDK5RAP3-201ENST00000338399 H7C0S8 307 aa14.73□□□□□ -0.05
CDK5RAP3-201ENST00000338399 TYROBPO43914 113 aa14.73□□□□□ -0.05
CDK5RAP3-201ENST00000338399 S1PR4O95977 384 aa14.73□□□□□ -0.05
CDK5RAP3-201ENST00000338399 EGFP01133 1207 aa14.73□□□□□ -0.05
CDK5RAP3-201ENST00000338399 IL1BP01584 269 aa14.73□□□□□ -0.05
CDK5RAP3-201ENST00000338399 CYP2A6P11509 494 aaPredicted RBP14.73□□□□□ -0.05
CDK5RAP3-201ENST00000338399 IL9P15248 144 aa14.73□□□□□ -0.05
CDK5RAP3-201ENST00000338399 XPAP23025 273 aaPredicted RBP14.73□□□□□ -0.05
CDK5RAP3-201ENST00000338399 GUCY1A3Q02108 690 aa14.73□□□□□ -0.05
CDK5RAP3-201ENST00000338399 PTSQ03393 145 aa14.73□□□□□ -0.05
CDK5RAP3-201ENST00000338399 SLC18A2Q05940 514 aa14.73□□□□□ -0.05
CDK5RAP3-201ENST00000338399 CNSTQ6PJW8 725 aa14.73□□□□□ -0.05
CDK5RAP3-201ENST00000338399 PARS2Q7L3T8 475 aaKnown RBP14.73□□□□□ -0.05
CDK5RAP3-201ENST00000338399 MMAAQ8IVH4 418 aaKnown RBP14.73□□□□□ -0.05
CDK5RAP3-201ENST00000338399 BANPQ8N9N5 519 aa14.73□□□□□ -0.05
CDK5RAP3-201ENST00000338399 MGARPQ8TDB4 240 aa14.73□□□□□ -0.05
CDK5RAP3-201ENST00000338399 ALKBH8Q96BT7 664 aaKnown RBP14.73□□□□□ -0.05
CDK5RAP3-201ENST00000338399 GPR22Q99680 433 aa14.73□□□□□ -0.05
CDK5RAP3-201ENST00000338399 FAM96AQ9H5X1 160 aa14.73□□□□□ -0.05
CDK5RAP3-201ENST00000338399 PCDH12Q9NPG4 1184 aa14.73□□□□□ -0.05
CDK5RAP3-201ENST00000338399 SMG5Q9UPR3 1016 aaKnown RBP14.73□□□□□ -0.05
CDK5RAP3-201ENST00000338399 ZNF106Q9H2Y7 1883 aaKnown RBP14.73□□□□□ -0.05
CDK5RAP3-201ENST00000338399 CKAP5Q14008 2032 aa14.72□□□□□ -0.05
CDK5RAP3-201ENST00000338399 FAM47DPA6NHR8 397 aa14.72□□□□□ -0.05
CDK5RAP3-201ENST00000338399 GOLGA8CPA6NN73 597 aa14.72□□□□□ -0.05
CDK5RAP3-201ENST00000338399 PRPF4O43172 522 aaKnown RBP eCLIP14.72□□□□□ -0.053e-6■■□□□ 13.5
CDK5RAP3-201ENST00000338399 TYK2P29597 1187 aa14.72□□□□□ -0.05
CDK5RAP3-201ENST00000338399 FOXN2P32314 431 aa14.72□□□□□ -0.05
CDK5RAP3-201ENST00000338399 MDH1P40925 334 aaKnown RBP14.72□□□□□ -0.05
CDK5RAP3-201ENST00000338399 CDKN1CP49918 316 aaPredicted RBP14.72□□□□□ -0.05
CDK5RAP3-201ENST00000338399 XIAPP98170 497 aa14.72□□□□□ -0.05
CDK5RAP3-201ENST00000338399 TFF2Q03403 129 aa14.72□□□□□ -0.05
CDK5RAP3-201ENST00000338399 ENPP2Q13822 863 aa14.72□□□□□ -0.05
CDK5RAP3-201ENST00000338399 C2orf27AQ580R0 203 aa14.72□□□□□ -0.05
CDK5RAP3-201ENST00000338399 ZRANB3Q5FWF4 1079 aa14.72□□□□□ -0.05
CDK5RAP3-201ENST00000338399 TMEM196Q5HYL7 178 aa14.72□□□□□ -0.05
CDK5RAP3-201ENST00000338399 CMC1Q7Z7K0 106 aa14.72□□□□□ -0.05
CDK5RAP3-201ENST00000338399 SDCCAG8Q86SQ7 713 aaPredicted RBP14.72□□□□□ -0.05
CDK5RAP3-201ENST00000338399 PBXIP1Q96AQ6 731 aa14.72□□□□□ -0.05
CDK5RAP3-201ENST00000338399 ARRDC3Q96B67 414 aa14.72□□□□□ -0.05
CDK5RAP3-201ENST00000338399 SLC13A1Q9BZW2 595 aa14.72□□□□□ -0.05
CDK5RAP3-201ENST00000338399 CAB39LQ9H9S4 337 aa14.72□□□□□ -0.05
CDK5RAP3-201ENST00000338399 MLXIPLQ9NP71 852 aa14.72□□□□□ -0.05
CDK5RAP3-201ENST00000338399 SSU72Q9NP77 194 aaKnown RBP14.72□□□□□ -0.05
CDK5RAP3-201ENST00000338399 PCMTD2Q9NV79 361 aa14.72□□□□□ -0.05
CDK5RAP3-201ENST00000338399 SLC39A10Q9ULF5 831 aa14.72□□□□□ -0.05
CDK5RAP3-201ENST00000338399 FAM95CA0A1B0GW59 222 aa14.72□□□□□ -0.05
CDK5RAP3-201ENST00000338399 NPC1O15118 1278 aa14.72□□□□□ -0.05
CDK5RAP3-201ENST00000338399 C1SP09871 688 aa14.72□□□□□ -0.05
CDK5RAP3-201ENST00000338399 CHRM1P11229 460 aaPredicted RBP14.72□□□□□ -0.05
CDK5RAP3-201ENST00000338399 BPIP17213 487 aa14.72□□□□□ -0.05
CDK5RAP3-201ENST00000338399 OGNP20774 298 aaKnown RBP14.72□□□□□ -0.05
CDK5RAP3-201ENST00000338399 SAT1P21673 171 aa14.72□□□□□ -0.05
CDK5RAP3-201ENST00000338399 NFKBIAP25963 317 aa14.72□□□□□ -0.05
CDK5RAP3-201ENST00000338399 ITGB7P26010 798 aa14.72□□□□□ -0.05
CDK5RAP3-201ENST00000338399 PMLP29590 882 aa14.72□□□□□ -0.05
CDK5RAP3-201ENST00000338399 VIPR1P32241 457 aa14.72□□□□□ -0.05
CDK5RAP3-201ENST00000338399 RPA3P35244 121 aaPredicted RBP14.72□□□□□ -0.05
CDK5RAP3-201ENST00000338399 ARHGEF7Q14155 803 aa14.72□□□□□ -0.05
CDK5RAP3-201ENST00000338399 E2F5Q15329 346 aa14.72□□□□□ -0.05
CDK5RAP3-201ENST00000338399 HABP4Q5JVS0 413 aaKnown RBP14.72□□□□□ -0.05
CDK5RAP3-201ENST00000338399 PSAPL1Q6NUJ1 521 aa14.72□□□□□ -0.05
CDK5RAP3-201ENST00000338399 FAM151BQ6UXP7 276 aa14.72□□□□□ -0.05
CDK5RAP3-201ENST00000338399 DSG4Q86SJ6 1040 aa14.72□□□□□ -0.05
CDK5RAP3-201ENST00000338399 CNPY4Q8N129 248 aa14.72□□□□□ -0.05
CDK5RAP3-201ENST00000338399 GPATCH11Q8N954 259 aa14.72□□□□□ -0.05
CDK5RAP3-201ENST00000338399 SGSM3Q96HU1 749 aa14.72□□□□□ -0.05
CDK5RAP3-201ENST00000338399 CAPS2Q9BXY5 557 aa14.72□□□□□ -0.05
CDK5RAP3-201ENST00000338399 SNX15Q9NRS6 342 aa14.72□□□□□ -0.05
CDK5RAP3-201ENST00000338399 NKIRAS1Q9NYS0 192 aa14.72□□□□□ -0.05
CDK5RAP3-201ENST00000338399 PLK4O00444 970 aa14.71□□□□□ -0.05
CDK5RAP3-201ENST00000338399 COPEO14579 308 aa14.71□□□□□ -0.05
CDK5RAP3-201ENST00000338399 DRD1P21728 446 aa14.71□□□□□ -0.05
CDK5RAP3-201ENST00000338399 CCNFP41002 786 aa14.71□□□□□ -0.05
CDK5RAP3-201ENST00000338399 PSMD8P48556 350 aa14.71□□□□□ -0.05
CDK5RAP3-201ENST00000338399 SERPINB8P50452 374 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms