RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 RCVRNP35243 200 aa13.25□□□□□ -0.29
COL2A1-201ENST00000337299 C1QTNF12Q5T7M4 302 aa13.25□□□□□ -0.29
COL2A1-201ENST00000337299 PLET1Q6UQ28 207 aa13.25□□□□□ -0.29
COL2A1-201ENST00000337299 FAM83AQ86UY5 434 aa13.25□□□□□ -0.29
COL2A1-201ENST00000337299 CPSF7Q8N684 471 aaKnown RBP13.25□□□□□ -0.29
COL2A1-201ENST00000337299 RDH11Q8TC12 318 aa13.25□□□□□ -0.29
COL2A1-201ENST00000337299 SIPA1Q96FS4 1042 aa13.25□□□□□ -0.29
COL2A1-201ENST00000337299 ZNF347Q96SE7 839 aa13.25□□□□□ -0.29
COL2A1-201ENST00000337299 HNRNPABQ99729 332 aaKnown RBP13.25□□□□□ -0.29
COL2A1-201ENST00000337299 REEP1Q9H902 201 aa13.25□□□□□ -0.29
COL2A1-201ENST00000337299 UCKL1Q9NWZ5 548 aa13.25□□□□□ -0.29
COL2A1-201ENST00000337299 IKZF3Q9UKT9 509 aa13.25□□□□□ -0.29
COL2A1-201ENST00000337299 SAMHD1Q9Y3Z3 626 aaKnown RBP13.25□□□□□ -0.29
COL2A1-201ENST00000337299 BCLAF3A2AJT9 711 aaKnown RBP13.24□□□□□ -0.29
COL2A1-201ENST00000337299 TOMM70O94826 608 aa13.24□□□□□ -0.29
COL2A1-201ENST00000337299 GLP2RO95838 553 aa13.24□□□□□ -0.29
COL2A1-201ENST00000337299 PIRTP0C851 137 aa13.24□□□□□ -0.29
COL2A1-201ENST00000337299 CD36P16671 472 aa13.24□□□□□ -0.29
COL2A1-201ENST00000337299 LAPTM5Q13571 262 aa13.24□□□□□ -0.29
COL2A1-201ENST00000337299 OR2T12Q8NG77 320 aa13.24□□□□□ -0.29
COL2A1-201ENST00000337299 NARS2Q96I59 477 aaKnown RBP13.24□□□□□ -0.29
COL2A1-201ENST00000337299 KAT8Q9H7Z6 458 aaKnown RBP13.24□□□□□ -0.29
COL2A1-201ENST00000337299 KIAA1257Q9ULG3 409 aa13.24□□□□□ -0.29
COL2A1-201ENST00000337299 PIN4Q9Y237 131 aaKnown RBP13.24□□□□□ -0.29
COL2A1-201ENST00000337299 SLC9A8Q9Y2E8 581 aa13.24□□□□□ -0.29
COL2A1-201ENST00000337299 NALCNQ8IZF0 1738 aa13.24□□□□□ -0.29
COL2A1-201ENST00000337299 AKAP12Q02952 1782 aa13.24□□□□□ -0.29
COL2A1-201ENST00000337299 ADM5C9JUS6 153 aa13.24□□□□□ -0.29
COL2A1-201ENST00000337299 ARPC2O15144 300 aa13.24□□□□□ -0.29
COL2A1-201ENST00000337299 SEC22BO75396 215 aa13.24□□□□□ -0.29
COL2A1-201ENST00000337299 PSIP1O75475 530 aaKnown RBP13.24□□□□□ -0.29
COL2A1-201ENST00000337299 IPO13O94829 963 aaKnown RBP13.24□□□□□ -0.29
COL2A1-201ENST00000337299 LRIG2O94898 1065 aa13.24□□□□□ -0.29
COL2A1-201ENST00000337299 GJB1P08034 283 aa13.24□□□□□ -0.29
COL2A1-201ENST00000337299 TSPAN19P0C672 248 aa13.24□□□□□ -0.29
COL2A1-201ENST00000337299 MTPNP58546 118 aa13.24□□□□□ -0.29
COL2A1-201ENST00000337299 TAS2R39P59534 338 aa13.24□□□□□ -0.29
COL2A1-201ENST00000337299 MXD1Q05195 221 aa13.24□□□□□ -0.29
COL2A1-201ENST00000337299 MAPKAPK3Q16644 382 aa13.24□□□□□ -0.29
COL2A1-201ENST00000337299 RABL3Q5HYI8 236 aa13.24□□□□□ -0.29
COL2A1-201ENST00000337299 ZNF544Q6NX49 715 aa13.24□□□□□ -0.29
COL2A1-201ENST00000337299 SYCE2Q6PIF2 218 aa13.24□□□□□ -0.29
COL2A1-201ENST00000337299 TFAP2DQ7Z6R9 452 aa13.24□□□□□ -0.29
COL2A1-201ENST00000337299 B3GALNT2Q8NCR0 500 aa13.24□□□□□ -0.29
COL2A1-201ENST00000337299 ZNF420Q8TAQ5 688 aaPredicted RBP13.24□□□□□ -0.29
COL2A1-201ENST00000337299 ZNF560Q96MR9 790 aa13.24□□□□□ -0.29
COL2A1-201ENST00000337299 SETD4Q9NVD3 440 aa13.24□□□□□ -0.29
COL2A1-201ENST00000337299 PRMT7Q9NVM4 692 aaPredicted RBP13.24□□□□□ -0.29
COL2A1-201ENST00000337299 ADPRHL2Q9NX46 363 aa13.24□□□□□ -0.29
COL2A1-201ENST00000337299 ZNF222Q9UK12 451 aa13.24□□□□□ -0.29
COL2A1-201ENST00000337299 RABL2BQ9UNT1 228 aa13.24□□□□□ -0.29
COL2A1-201ENST00000337299 MYH11P35749 1972 aa13.24□□□□□ -0.29
COL2A1-201ENST00000337299 PDE9AO76083 593 aa13.24□□□□□ -0.29
COL2A1-201ENST00000337299 NTRK1P04629 796 aa13.24□□□□□ -0.29
COL2A1-201ENST00000337299 POLR2EP19388 210 aaKnown RBP13.24□□□□□ -0.29
COL2A1-201ENST00000337299 PRKACGP22612 351 aa13.24□□□□□ -0.29
COL2A1-201ENST00000337299 NMBRP28336 390 aa13.24□□□□□ -0.29
COL2A1-201ENST00000337299 TKTL1P51854 596 aa13.24□□□□□ -0.29
COL2A1-201ENST00000337299 CYP4F8P98187 520 aa13.24□□□□□ -0.29
COL2A1-201ENST00000337299 PPP1R3AQ16821 1122 aa13.24□□□□□ -0.29
COL2A1-201ENST00000337299 DDI2Q5TDH0 399 aa13.24□□□□□ -0.29
COL2A1-201ENST00000337299 RRM2BQ7LG56 351 aa13.24□□□□□ -0.29
COL2A1-201ENST00000337299 CAND1Q86VP6 1230 aaKnown RBP13.24□□□□□ -0.29
COL2A1-201ENST00000337299 TRIM48Q8IWZ4 208 aa13.24□□□□□ -0.29
COL2A1-201ENST00000337299 OR10Q1Q8NGQ4 319 aa13.24□□□□□ -0.29
COL2A1-201ENST00000337299 PNPT1Q8TCS8 783 aaKnown RBP13.24□□□□□ -0.29
COL2A1-201ENST00000337299 AFG1LQ8WV93 481 aa13.24□□□□□ -0.29
COL2A1-201ENST00000337299 MTFMTQ96DP5 389 aaKnown RBP13.24□□□□□ -0.29
COL2A1-201ENST00000337299 CEP295NLQ96MC4 621 aa13.24□□□□□ -0.29
COL2A1-201ENST00000337299 TBL1YQ9BQ87 522 aa13.24□□□□□ -0.29
COL2A1-201ENST00000337299 ACTR8Q9H981 624 aa13.24□□□□□ -0.29
COL2A1-201ENST00000337299 CYP3A43Q9HB55 503 aa13.24□□□□□ -0.29
COL2A1-201ENST00000337299 WDR6Q9NNW5 1121 aaKnown RBP13.24□□□□□ -0.29
COL2A1-201ENST00000337299 SUCOQ9UBS9 1254 aaKnown RBP13.24□□□□□ -0.29
COL2A1-201ENST00000337299 MAFGO15525 162 aa13.23□□□□□ -0.29
COL2A1-201ENST00000337299 ZW10O43264 779 aa13.23□□□□□ -0.29
COL2A1-201ENST00000337299 XPNPEP2O43895 674 aa13.23□□□□□ -0.29
COL2A1-201ENST00000337299 VTNP04004 478 aa13.23□□□□□ -0.29
COL2A1-201ENST00000337299 SMIM18P0DKX4 95 aa13.23□□□□□ -0.29
COL2A1-201ENST00000337299 CLK3P49761 638 aaKnown RBP13.23□□□□□ -0.29
COL2A1-201ENST00000337299 MOB2Q70IA6 237 aa13.23□□□□□ -0.29
COL2A1-201ENST00000337299 MICAL3Q7RTP6 2002 aa13.23□□□□□ -0.29
COL2A1-201ENST00000337299 ABHD11Q8NFV4 315 aa13.23□□□□□ -0.29
COL2A1-201ENST00000337299 SIGLEC10Q96LC7 697 aa13.23□□□□□ -0.29
COL2A1-201ENST00000337299 TMEM74Q96NL1 305 aa13.23□□□□□ -0.29
COL2A1-201ENST00000337299 TTYH2Q9BSA4 534 aa13.23□□□□□ -0.29
COL2A1-201ENST00000337299 DCSTAMPQ9H295 470 aa13.23□□□□□ -0.29
COL2A1-201ENST00000337299 RPF2Q9H7B2 306 aaKnown RBP13.23□□□□□ -0.29
COL2A1-201ENST00000337299 OXSMQ9NWU1 459 aa13.23□□□□□ -0.29
COL2A1-201ENST00000337299 PTBP2Q9UKA9 531 aaKnown RBP13.23□□□□□ -0.29
COL2A1-201ENST00000337299 ERGIC3Q9Y282 383 aa13.23□□□□□ -0.29
COL2A1-201ENST00000337299 SESN1Q9Y6P5 492 aa13.23□□□□□ -0.29
COL2A1-201ENST00000337299 SAGE2PA6NJ88 616 aa13.23□□□□□ -0.29
COL2A1-201ENST00000337299 YDJCA8MPS7 323 aa13.23□□□□□ -0.29
COL2A1-201ENST00000337299 SLC22A3O75751 556 aa13.23□□□□□ -0.29
COL2A1-201ENST00000337299 VNN1O95497 513 aa13.23□□□□□ -0.29
COL2A1-201ENST00000337299 ABCB1P08183 1280 aaPredicted RBP13.23□□□□□ -0.29
COL2A1-201ENST00000337299 DHRS4L1P0CG22 281 aa13.23□□□□□ -0.29
COL2A1-201ENST00000337299 PRKCHP24723 683 aa13.23□□□□□ -0.29
COL2A1-201ENST00000337299 GRIK1P39086 918 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms