RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 F11P03951 625 aa12.58□□□□□ -0.39
LIMK1-201ENST00000336180 UGT1A6P19224 532 aa12.58□□□□□ -0.39
LIMK1-201ENST00000336180 UGT1A1P22309 533 aa12.58□□□□□ -0.39
LIMK1-201ENST00000336180 UGT1A4P22310 534 aa12.58□□□□□ -0.39
LIMK1-201ENST00000336180 UGT1A3P35503 534 aa12.58□□□□□ -0.39
LIMK1-201ENST00000336180 UGT1A5P35504 534 aa12.58□□□□□ -0.39
LIMK1-201ENST00000336180 ARL1P40616 181 aaPredicted RBP12.58□□□□□ -0.39
LIMK1-201ENST00000336180 OR4D1Q15615 310 aa12.58□□□□□ -0.39
LIMK1-201ENST00000336180 CCDC6Q16204 474 aa12.58□□□□□ -0.39
LIMK1-201ENST00000336180 RFLNAQ6ZTI6 216 aa12.58□□□□□ -0.39
LIMK1-201ENST00000336180 LYSMD3Q7Z3D4 306 aa12.58□□□□□ -0.39
LIMK1-201ENST00000336180 CNTN4Q8IWV2 1026 aa12.58□□□□□ -0.39
LIMK1-201ENST00000336180 CLDN19Q8N6F1 224 aa12.58□□□□□ -0.39
LIMK1-201ENST00000336180 SIDT2Q8NBJ9 832 aaKnown RBP12.58□□□□□ -0.39
LIMK1-201ENST00000336180 CFAP61Q8NHU2 1237 aa12.58□□□□□ -0.39
LIMK1-201ENST00000336180 USP13Q92995 863 aaPredicted RBP12.58□□□□□ -0.39
LIMK1-201ENST00000336180 ISL2Q96A47 359 aa12.58□□□□□ -0.39
LIMK1-201ENST00000336180 LENG8Q96PV6 779 aaPredicted RBP12.58□□□□□ -0.39
LIMK1-201ENST00000336180 PSKH2Q96QS6 385 aa12.58□□□□□ -0.39
LIMK1-201ENST00000336180 HBEGFQ99075 208 aa12.58□□□□□ -0.39
LIMK1-201ENST00000336180 TCF25Q9BQ70 676 aa12.58□□□□□ -0.39
LIMK1-201ENST00000336180 PRKD2Q9BZL6 878 aa12.58□□□□□ -0.39
LIMK1-201ENST00000336180 ZDHHC4Q9NPG8 344 aa12.58□□□□□ -0.39
LIMK1-201ENST00000336180 TCF7L2Q9NQB0 619 aa12.58□□□□□ -0.39
LIMK1-201ENST00000336180 TAGLN3Q9UI15 199 aa12.58□□□□□ -0.39
LIMK1-201ENST00000336180 PLXNA3P51805 1871 aa12.58□□□□□ -0.4
LIMK1-201ENST00000336180 STX16-NPEPL1H3BU86 382 aa12.58□□□□□ -0.4
LIMK1-201ENST00000336180 CDC7O00311 574 aa12.58□□□□□ -0.4
LIMK1-201ENST00000336180 LRG1P02750 347 aa12.58□□□□□ -0.4
LIMK1-201ENST00000336180 TCN1P20061 433 aaPredicted RBP12.58□□□□□ -0.4
LIMK1-201ENST00000336180 MC4RP32245 332 aa12.58□□□□□ -0.4
LIMK1-201ENST00000336180 RASSF2P50749 326 aa12.58□□□□□ -0.4
LIMK1-201ENST00000336180 PRMT2P55345 433 aa12.58□□□□□ -0.4
LIMK1-201ENST00000336180 RCN1Q15293 331 aa12.58□□□□□ -0.4
LIMK1-201ENST00000336180 PTPRNQ16849 979 aa12.58□□□□□ -0.4
LIMK1-201ENST00000336180 LRRC36Q1X8D7 754 aa12.58□□□□□ -0.4
LIMK1-201ENST00000336180 C18orf21Q32NC0 220 aaPredicted RBP12.58□□□□□ -0.4
LIMK1-201ENST00000336180 LAYNQ6UX15 382 aa12.58□□□□□ -0.4
LIMK1-201ENST00000336180 BADQ92934 168 aa12.58□□□□□ -0.4
LIMK1-201ENST00000336180 ZNF689Q96CS4 500 aaPredicted RBP12.58□□□□□ -0.4
LIMK1-201ENST00000336180 MGME1Q9BQP7 344 aa12.58□□□□□ -0.4
LIMK1-201ENST00000336180 ARNT2Q9HBZ2 717 aa12.58□□□□□ -0.4
LIMK1-201ENST00000336180 GRXCR1A8MXD5 290 aa12.58□□□□□ -0.4
LIMK1-201ENST00000336180 SRP72O76094 671 aaKnown RBP12.58□□□□□ -0.4
LIMK1-201ENST00000336180 ARHGEF15O94989 841 aa12.58□□□□□ -0.4
LIMK1-201ENST00000336180 BAG2O95816 211 aa12.58□□□□□ -0.4
LIMK1-201ENST00000336180 SERPINA6P08185 405 aa12.58□□□□□ -0.4
LIMK1-201ENST00000336180 DNAJB1P25685 340 aa12.58□□□□□ -0.4
LIMK1-201ENST00000336180 TPP2P29144 1249 aaPredicted RBP12.58□□□□□ -0.4
LIMK1-201ENST00000336180 IRS1P35568 1242 aa12.58□□□□□ -0.4
LIMK1-201ENST00000336180 SKIV2L2P42285 1042 aaKnown RBP12.58□□□□□ -0.4
LIMK1-201ENST00000336180 TIAL1Q01085 375 aaKnown RBP eCLIP12.58□□□□□ -0.4
LIMK1-201ENST00000336180 PDAP1Q13442 181 aaKnown RBP12.58□□□□□ -0.4
LIMK1-201ENST00000336180 LRRC49Q8IUZ0 686 aa12.58□□□□□ -0.4
LIMK1-201ENST00000336180 KLHDC8BQ8IXV7 354 aa12.58□□□□□ -0.4
LIMK1-201ENST00000336180 BBS5Q8N3I7 341 aa12.58□□□□□ -0.4
LIMK1-201ENST00000336180 EID2BQ96D98 161 aa12.58□□□□□ -0.4
LIMK1-201ENST00000336180 GPR21Q99679 349 aa12.58□□□□□ -0.4
LIMK1-201ENST00000336180 TDRD1Q9BXT4 1180 aaKnown RBP12.58□□□□□ -0.4
LIMK1-201ENST00000336180 LINC00597Q9H2U6 94 aa12.58□□□□□ -0.4
LIMK1-201ENST00000336180 C11orf49Q9H6J7 331 aa12.58□□□□□ -0.4
LIMK1-201ENST00000336180 ENO4A6NNW6 628 aa12.57□□□□□ -0.4
LIMK1-201ENST00000336180 TARM1B6A8C7 271 aa12.57□□□□□ -0.4
LIMK1-201ENST00000336180 NDUFS3O75489 264 aa12.57□□□□□ -0.4
LIMK1-201ENST00000336180 RPP40O75818 363 aaKnown RBP12.57□□□□□ -0.4
LIMK1-201ENST00000336180 RANBP1P43487 201 aa12.57□□□□□ -0.4
LIMK1-201ENST00000336180 LEPRP48357 1165 aaKnown RBP12.57□□□□□ -0.4
LIMK1-201ENST00000336180 AGTR2P50052 363 aa12.57□□□□□ -0.4
LIMK1-201ENST00000336180 RPL14P50914 215 aaKnown RBP12.57□□□□□ -0.4
LIMK1-201ENST00000336180 CREB5Q02930 508 aa12.57□□□□□ -0.4
LIMK1-201ENST00000336180 RAB33AQ14088 237 aa12.57□□□□□ -0.4
LIMK1-201ENST00000336180 FAM83EQ2M2I3 478 aa12.57□□□□□ -0.4
LIMK1-201ENST00000336180 PLA2G4EQ3MJ16 856 aa12.57□□□□□ -0.4
LIMK1-201ENST00000336180 SEL1L3Q68CR1 1132 aa12.57□□□□□ -0.4
LIMK1-201ENST00000336180 SNX32Q86XE0 403 aa12.57□□□□□ -0.4
LIMK1-201ENST00000336180 PDZD8Q8NEN9 1154 aa12.57□□□□□ -0.4
LIMK1-201ENST00000336180 BRSK1Q8TDC3 778 aa12.57□□□□□ -0.4
LIMK1-201ENST00000336180 C2orf15Q8WU43 125 aaKnown RBP12.57□□□□□ -0.4
LIMK1-201ENST00000336180 INPP5DQ92835 1189 aa12.57□□□□□ -0.4
LIMK1-201ENST00000336180 TRIB3Q96RU7 358 aa12.57□□□□□ -0.4
LIMK1-201ENST00000336180 TTC1Q99614 292 aa12.57□□□□□ -0.4
LIMK1-201ENST00000336180 BOCQ9BWV1 1114 aa12.57□□□□□ -0.4
LIMK1-201ENST00000336180 SLC46A2Q9BY10 475 aa12.57□□□□□ -0.4
LIMK1-201ENST00000336180 BTRCQ9Y297 605 aa12.57□□□□□ -0.4
LIMK1-201ENST00000336180 KRT87PA6NCN2 255 aa12.57□□□□□ -0.4
LIMK1-201ENST00000336180 NPEPPSL1A6NEC2 478 aa12.57□□□□□ -0.4
LIMK1-201ENST00000336180 UBFD1O14562 309 aaKnown RBP12.57□□□□□ -0.4
LIMK1-201ENST00000336180 ATP5HO75947 161 aa12.57□□□□□ -0.4
LIMK1-201ENST00000336180 EFEMP2O95967 443 aa12.57□□□□□ -0.4
LIMK1-201ENST00000336180 FGF1P05230 155 aa12.57□□□□□ -0.4
LIMK1-201ENST00000336180 LTA4HP09960 611 aaKnown RBP12.57□□□□□ -0.4
LIMK1-201ENST00000336180 MAGEA10P43363 369 aaPredicted RBP12.57□□□□□ -0.4
LIMK1-201ENST00000336180 KPNA1P52294 538 aaPredicted RBP12.57□□□□□ -0.4
LIMK1-201ENST00000336180 FOXA1P55317 472 aa12.57□□□□□ -0.4
LIMK1-201ENST00000336180 PKNOX1P55347 436 aa12.57□□□□□ -0.4
LIMK1-201ENST00000336180 TSNQ15631 228 aaKnown RBP12.57□□□□□ -0.4
LIMK1-201ENST00000336180 TECRLQ5HYJ1 363 aa12.57□□□□□ -0.4
LIMK1-201ENST00000336180 TSPAN33Q86UF1 283 aa12.57□□□□□ -0.4
LIMK1-201ENST00000336180 DEFB107AQ8IZN7 70 aa12.57□□□□□ -0.4
LIMK1-201ENST00000336180 FAM156AQ8NDB6 213 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms