RNA–Protein interactions for RNA: ENST00000334731.6

C9orf85-201, Transcript of chromosome 9 open reading frame 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf85, Length 1,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-201ENST00000334731 RHOT2Q8IXI1 618 aa11.21□□□□□ -0.61
C9orf85-201ENST00000334731 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.21□□□□□ -0.61
C9orf85-201ENST00000334731 ARL10Q8N8L6 244 aa11.21□□□□□ -0.61
C9orf85-201ENST00000334731 GPR156Q8NFN8 814 aa11.21□□□□□ -0.61
C9orf85-201ENST00000334731 SNIP1Q8TAD8 396 aaKnown RBP11.21□□□□□ -0.61
C9orf85-201ENST00000334731 GRAMD1AQ96CP6 724 aa11.21□□□□□ -0.61
C9orf85-201ENST00000334731 NUS1Q96E22 293 aa11.21□□□□□ -0.61
C9orf85-201ENST00000334731 DTD2Q96FN9 168 aa11.21□□□□□ -0.61
C9orf85-201ENST00000334731 CCDC3Q9BQI4 270 aa11.21□□□□□ -0.61
C9orf85-201ENST00000334731 TMEM168Q9H0V1 697 aa11.21□□□□□ -0.61
C9orf85-201ENST00000334731 CYP4F12Q9HCS2 524 aa11.21□□□□□ -0.61
C9orf85-201ENST00000334731 URB1O60287 2271 aaKnown RBP11.21□□□□□ -0.62
C9orf85-201ENST00000334731 TDRD6O60522 2096 aaKnown RBP11.2□□□□□ -0.62
C9orf85-201ENST00000334731 A0A0J9YYE9 177 aa11.2□□□□□ -0.62
C9orf85-201ENST00000334731 A0A1W2PNU3 283 aaPredicted RBP11.2□□□□□ -0.62
C9orf85-201ENST00000334731 PRSS38A1L453 326 aa11.2□□□□□ -0.62
C9orf85-201ENST00000334731 LRRD1A4D1F6 860 aa11.2□□□□□ -0.62
C9orf85-201ENST00000334731 ZNF487B1APH4 448 aa11.2□□□□□ -0.62
C9orf85-201ENST00000334731 AKR1B15C9JRZ8 316 aaPredicted RBP11.2□□□□□ -0.62
C9orf85-201ENST00000334731 NTN3O00634 580 aaPredicted RBP11.2□□□□□ -0.62
C9orf85-201ENST00000334731 TCEA3O75764 348 aa11.2□□□□□ -0.62
C9orf85-201ENST00000334731 PRLP01236 227 aa11.2□□□□□ -0.62
C9orf85-201ENST00000334731 JCHAINP01591 159 aa11.2□□□□□ -0.62
C9orf85-201ENST00000334731 TRBC1P01850 177 aa11.2□□□□□ -0.62
C9orf85-201ENST00000334731 HLA-DQB2P05538 268 aa11.2□□□□□ -0.62
C9orf85-201ENST00000334731 CEACAM5P06731 702 aa11.2□□□□□ -0.62
C9orf85-201ENST00000334731 MYCLP1P12525 358 aaPredicted RBP11.2□□□□□ -0.62
C9orf85-201ENST00000334731 KRT10P13645 584 aa11.2□□□□□ -0.62
C9orf85-201ENST00000334731 ITPKBP27987 946 aa11.2□□□□□ -0.62
C9orf85-201ENST00000334731 CDK3Q00526 305 aa11.2□□□□□ -0.62
C9orf85-201ENST00000334731 PTSQ03393 145 aa11.2□□□□□ -0.62
C9orf85-201ENST00000334731 DPTQ07507 201 aa11.2□□□□□ -0.62
C9orf85-201ENST00000334731 TCEAL1Q15170 157 aa11.2□□□□□ -0.62
C9orf85-201ENST00000334731 LRRC38Q5VT99 294 aa11.2□□□□□ -0.62
C9orf85-201ENST00000334731 TAF8Q7Z7C8 310 aa11.2□□□□□ -0.62
C9orf85-201ENST00000334731 HEATR4Q86WZ0 1026 aa11.2□□□□□ -0.62
C9orf85-201ENST00000334731 VSIG1Q86XK7 387 aa11.2□□□□□ -0.62
C9orf85-201ENST00000334731 CNGA4Q8IV77 575 aa11.2□□□□□ -0.62
C9orf85-201ENST00000334731 CCDC13Q8IYE1 715 aa11.2□□□□□ -0.62
C9orf85-201ENST00000334731 LSMEM2Q8N112 164 aa11.2□□□□□ -0.62
C9orf85-201ENST00000334731 NDUFAF2Q8N183 169 aa11.2□□□□□ -0.62
C9orf85-201ENST00000334731 PLD5Q8N7P1 536 aa11.2□□□□□ -0.62
C9orf85-201ENST00000334731 CCNYQ8ND76 341 aa11.2□□□□□ -0.62
C9orf85-201ENST00000334731 FAM46DQ8NEK8 389 aa11.2□□□□□ -0.62
C9orf85-201ENST00000334731 CCL4L1Q8NHW4 92 aa11.2□□□□□ -0.62
C9orf85-201ENST00000334731 WDR48Q8TAF3 677 aa11.2□□□□□ -0.62
C9orf85-201ENST00000334731 HDAC11Q96DB2 347 aa11.2□□□□□ -0.62
C9orf85-201ENST00000334731 LGMNQ99538 433 aa11.2□□□□□ -0.62
C9orf85-201ENST00000334731 POLR1BQ9H9Y6 1135 aa11.2□□□□□ -0.62
C9orf85-201ENST00000334731 PHPT1Q9NRX4 125 aaPredicted RBP11.2□□□□□ -0.62
C9orf85-201ENST00000334731 RABGEF1Q9UJ41 708 aa11.2□□□□□ -0.62
C9orf85-201ENST00000334731 MOSPD1Q9UJG1 213 aa11.2□□□□□ -0.62
C9orf85-201ENST00000334731 INTUQ9ULD6 942 aa11.2□□□□□ -0.62
C9orf85-201ENST00000334731 CHKBQ9Y259 395 aa11.2□□□□□ -0.62
C9orf85-201ENST00000334731 ENTPD2Q9Y5L3 495 aa11.2□□□□□ -0.62
C9orf85-201ENST00000334731 KCNK1O00180 336 aa11.19□□□□□ -0.62
C9orf85-201ENST00000334731 RRP8O43159 456 aaKnown RBP11.19□□□□□ -0.62
C9orf85-201ENST00000334731 NOBOXO60393 691 aa11.19□□□□□ -0.62
C9orf85-201ENST00000334731 DXOO77932 396 aaKnown RBP11.19□□□□□ -0.62
C9orf85-201ENST00000334731 TEAD1P28347 426 aa11.19□□□□□ -0.62
C9orf85-201ENST00000334731 SLC1A1P43005 524 aa11.19□□□□□ -0.62
C9orf85-201ENST00000334731 PDX1P52945 283 aa11.19□□□□□ -0.62
C9orf85-201ENST00000334731 GABREP78334 506 aa11.19□□□□□ -0.62
C9orf85-201ENST00000334731 PPIDQ08752 370 aaKnown RBP11.19□□□□□ -0.62
C9orf85-201ENST00000334731 LRRC66Q68CR7 880 aa11.19□□□□□ -0.62
C9orf85-201ENST00000334731 SLC9A4Q6AI14 798 aa11.19□□□□□ -0.62
C9orf85-201ENST00000334731 SARM1Q6SZW1 724 aa11.19□□□□□ -0.62
C9orf85-201ENST00000334731 NLRP8Q86W28 1048 aa11.19□□□□□ -0.62
C9orf85-201ENST00000334731 NRROSQ86YC3 692 aa11.19□□□□□ -0.62
C9orf85-201ENST00000334731 SFTPA2Q8IWL1 248 aa11.19□□□□□ -0.62
C9orf85-201ENST00000334731 CNTD1Q8N815 330 aa11.19□□□□□ -0.62
C9orf85-201ENST00000334731 OR6C4Q8NGE1 309 aa11.19□□□□□ -0.62
C9orf85-201ENST00000334731 GPBAR1Q8TDU6 330 aa11.19□□□□□ -0.62
C9orf85-201ENST00000334731 SCAMP4Q969E2 229 aa11.19□□□□□ -0.62
C9orf85-201ENST00000334731 CCDC74AQ96AQ1 378 aa11.19□□□□□ -0.62
C9orf85-201ENST00000334731 ATXN7L3BQ96GX2 97 aa11.19□□□□□ -0.62
C9orf85-201ENST00000334731 CRELD1Q96HD1 420 aa11.19□□□□□ -0.62
C9orf85-201ENST00000334731 HIC2Q96JB3 615 aa11.19□□□□□ -0.62
C9orf85-201ENST00000334731 ZNF578Q96N58 590 aaPredicted RBP11.19□□□□□ -0.62
C9orf85-201ENST00000334731 TDRD1Q9BXT4 1180 aaKnown RBP11.19□□□□□ -0.62
C9orf85-201ENST00000334731 MAK16Q9BXY0 300 aaKnown RBP11.19□□□□□ -0.62
C9orf85-201ENST00000334731 FRMD8Q9BZ67 464 aaPredicted RBP11.19□□□□□ -0.62
C9orf85-201ENST00000334731 ABCG8Q9H221 673 aa11.19□□□□□ -0.62
C9orf85-201ENST00000334731 HAUS2Q9NVX0 235 aa11.19□□□□□ -0.62
C9orf85-201ENST00000334731 CD84Q9UIB8 345 aa11.19□□□□□ -0.62
C9orf85-201ENST00000334731 SLC17A4Q9Y2C5 497 aa11.19□□□□□ -0.62
C9orf85-201ENST00000334731 HYOU1Q9Y4L1 999 aa11.19□□□□□ -0.62
C9orf85-201ENST00000334731 TTLL3Q9Y4R7 772 aa11.19□□□□□ -0.62
C9orf85-201ENST00000334731 HEY1Q9Y5J3 304 aa11.19□□□□□ -0.62
C9orf85-201ENST00000334731 A0A1W2PQM1 296 aa11.18□□□□□ -0.62
C9orf85-201ENST00000334731 GOLGA6CA6NDK9 693 aa11.18□□□□□ -0.62
C9orf85-201ENST00000334731 GOLGA6BA6NDN3 693 aa11.18□□□□□ -0.62
C9orf85-201ENST00000334731 APOL1O14791 398 aa11.18□□□□□ -0.62
C9orf85-201ENST00000334731 SOD1P00441 154 aa11.18□□□□□ -0.62
C9orf85-201ENST00000334731 MMP2P08253 660 aa11.18□□□□□ -0.62
C9orf85-201ENST00000334731 GOLGA6DP0CG33 693 aa11.18□□□□□ -0.62
C9orf85-201ENST00000334731 ZNF30P17039 623 aa11.18□□□□□ -0.62
C9orf85-201ENST00000334731 CA4P22748 312 aa11.18□□□□□ -0.62
C9orf85-201ENST00000334731 ABCG1P45844 678 aa11.18□□□□□ -0.62
C9orf85-201ENST00000334731 GPR1P46091 355 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms