RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 RHOP08100 348 aa11.22□□□□□ -0.61
POLR1B-202ENST00000333990 NSG1P42857 185 aa11.22□□□□□ -0.61
POLR1B-202ENST00000333990 CLDN10P78369 228 aa11.22□□□□□ -0.61
POLR1B-202ENST00000333990 ZBTB17Q13105 803 aa11.22□□□□□ -0.61
POLR1B-202ENST00000333990 PAFAH1B3Q15102 231 aaKnown RBP11.22□□□□□ -0.61
POLR1B-202ENST00000333990 TRIP10Q15642 601 aa11.22□□□□□ -0.61
POLR1B-202ENST00000333990 FNBP1LQ5T0N5 605 aa11.22□□□□□ -0.61
POLR1B-202ENST00000333990 HECTD2Q5U5R9 776 aa11.22□□□□□ -0.61
POLR1B-202ENST00000333990 ZCCHC23Q6ZST2 131 aa11.22□□□□□ -0.61
POLR1B-202ENST00000333990 TRABD2AQ86V40 505 aa11.22□□□□□ -0.61
POLR1B-202ENST00000333990 TRPC4APQ8TEL6 797 aa11.22□□□□□ -0.61
POLR1B-202ENST00000333990 SIPA1Q96FS4 1042 aa11.22□□□□□ -0.61
POLR1B-202ENST00000333990 C1orf74Q96LT6 269 aa11.22□□□□□ -0.61
POLR1B-202ENST00000333990 PRICKLE1Q96MT3 831 aaPredicted RBP11.22□□□□□ -0.61
POLR1B-202ENST00000333990 CATSPER2Q96P56 530 aa11.22□□□□□ -0.61
POLR1B-202ENST00000333990 NMUR1Q9HB89 426 aa11.22□□□□□ -0.61
POLR1B-202ENST00000333990 ZNF180Q9UJW8 692 aa11.22□□□□□ -0.61
POLR1B-202ENST00000333990 CROTQ9UKG9 612 aa11.22□□□□□ -0.61
POLR1B-202ENST00000333990 TELO2Q9Y4R8 837 aa11.22□□□□□ -0.61
POLR1B-202ENST00000333990 CACNA1SQ13698 1873 aa11.22□□□□□ -0.61
POLR1B-202ENST00000333990 EDDM13A0A1B0GTR0 161 aa11.21□□□□□ -0.61
POLR1B-202ENST00000333990 TMEM189-UBE2V1I3L0A0 370 aa11.21□□□□□ -0.61
POLR1B-202ENST00000333990 SLC28A1O00337 649 aa11.21□□□□□ -0.61
POLR1B-202ENST00000333990 GABRDO14764 452 aa11.21□□□□□ -0.61
POLR1B-202ENST00000333990 TEX28O15482 410 aa11.21□□□□□ -0.61
POLR1B-202ENST00000333990 TM7SF2O76062 418 aa11.21□□□□□ -0.61
POLR1B-202ENST00000333990 NEK3P51956 506 aa11.21□□□□□ -0.61
POLR1B-202ENST00000333990 DAB2P98082 770 aa11.21□□□□□ -0.61
POLR1B-202ENST00000333990 SPIDRQ14159 915 aa11.21□□□□□ -0.61
POLR1B-202ENST00000333990 LRRC32Q14392 662 aa11.21□□□□□ -0.61
POLR1B-202ENST00000333990 LDLRAP1Q5SW96 308 aa11.21□□□□□ -0.61
POLR1B-202ENST00000333990 GDPD4Q6W3E5 623 aa11.21□□□□□ -0.61
POLR1B-202ENST00000333990 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.21□□□□□ -0.61
POLR1B-202ENST00000333990 TMEM132CQ8N3T6 1108 aa11.21□□□□□ -0.61
POLR1B-202ENST00000333990 CDCA3Q99618 268 aaPredicted RBP11.21□□□□□ -0.61
POLR1B-202ENST00000333990 MIOSQ9NXC5 875 aa11.21□□□□□ -0.61
POLR1B-202ENST00000333990 MRPS33Q9Y291 106 aaKnown RBP11.21□□□□□ -0.61
POLR1B-202ENST00000333990 CCDC154A6NI56 674 aa11.21□□□□□ -0.61
POLR1B-202ENST00000333990 LEFTY2O00292 366 aa11.21□□□□□ -0.61
POLR1B-202ENST00000333990 FCHO1O14526 889 aa11.21□□□□□ -0.61
POLR1B-202ENST00000333990 HDAC3O15379 428 aa11.21□□□□□ -0.61
POLR1B-202ENST00000333990 IPO13O94829 963 aaKnown RBP11.21□□□□□ -0.61
POLR1B-202ENST00000333990 SHBGP04278 402 aa11.21□□□□□ -0.61
POLR1B-202ENST00000333990 IL1R2P27930 398 aa11.21□□□□□ -0.61
POLR1B-202ENST00000333990 GNA13Q14344 377 aa11.21□□□□□ -0.61
POLR1B-202ENST00000333990 C2orf27AQ580R0 203 aa11.21□□□□□ -0.61
POLR1B-202ENST00000333990 MS4A13Q5J8X5 152 aa11.21□□□□□ -0.61
POLR1B-202ENST00000333990 ZNF783Q6ZMS7 281 aa11.21□□□□□ -0.61
POLR1B-202ENST00000333990 CMTM8Q8IZV2 173 aa11.21□□□□□ -0.61
POLR1B-202ENST00000333990 HDDC3Q8N4P3 179 aa11.21□□□□□ -0.61
POLR1B-202ENST00000333990 PWWP2AQ96N64 755 aa11.21□□□□□ -0.61
POLR1B-202ENST00000333990 LMAN2LQ9H0V9 348 aa11.21□□□□□ -0.61
POLR1B-202ENST00000333990 ABCG4Q9H172 646 aa11.21□□□□□ -0.61
POLR1B-202ENST00000333990 WNT6Q9Y6F9 365 aa11.21□□□□□ -0.61
POLR1B-202ENST00000333990 GOLGA4Q13439 2230 aaKnown RBP11.21□□□□□ -0.62
POLR1B-202ENST00000333990 SRRM3A6NNA2 597 aaPredicted RBP11.21□□□□□ -0.62
POLR1B-202ENST00000333990 LATS1O95835 1130 aa11.21□□□□□ -0.62
POLR1B-202ENST00000333990 TYRP14679 529 aa11.21□□□□□ -0.62
POLR1B-202ENST00000333990 PCSK2P16519 638 aa11.21□□□□□ -0.62
POLR1B-202ENST00000333990 GRIA4P48058 902 aa11.21□□□□□ -0.62
POLR1B-202ENST00000333990 SEC13P55735 322 aa11.21□□□□□ -0.62
POLR1B-202ENST00000333990 ACTN3Q08043 901 aaPredicted RBP11.21□□□□□ -0.62
POLR1B-202ENST00000333990 SERINC3Q13530 473 aa11.21□□□□□ -0.62
POLR1B-202ENST00000333990 PDK4Q16654 411 aa11.21□□□□□ -0.62
POLR1B-202ENST00000333990 XKR6Q5GH73 641 aa11.21□□□□□ -0.62
POLR1B-202ENST00000333990 NCBP2-AS2Q69YL0 99 aa11.21□□□□□ -0.62
POLR1B-202ENST00000333990 TTC27Q6P3X3 843 aa11.21□□□□□ -0.62
POLR1B-202ENST00000333990 CLYBLQ8N0X4 340 aa11.21□□□□□ -0.62
POLR1B-202ENST00000333990 DTX3LQ8TDB6 740 aa11.21□□□□□ -0.62
POLR1B-202ENST00000333990 DDX1Q92499 740 aaKnown RBP11.21□□□□□ -0.62
POLR1B-202ENST00000333990 CD101Q93033 1021 aa11.21□□□□□ -0.62
POLR1B-202ENST00000333990 OXNAD1Q96HP4 312 aaPredicted RBP11.21□□□□□ -0.62
POLR1B-202ENST00000333990 WRAP53Q9BUR4 548 aaKnown RBP11.21□□□□□ -0.62
POLR1B-202ENST00000333990 SPATS2LQ9NUQ6 558 aaKnown RBP11.21□□□□□ -0.62
POLR1B-202ENST00000333990 FAF1Q9UNN5 650 aaPredicted RBP11.21□□□□□ -0.62
POLR1B-202ENST00000333990 M0QZQ0 153 aa11.21□□□□□ -0.62
POLR1B-202ENST00000333990 MRASO14807 208 aa11.21□□□□□ -0.62
POLR1B-202ENST00000333990 RASSF9O75901 435 aa11.21□□□□□ -0.62
POLR1B-202ENST00000333990 WDR47O94967 919 aa11.21□□□□□ -0.62
POLR1B-202ENST00000333990 CFHP08603 1231 aa11.21□□□□□ -0.62
POLR1B-202ENST00000333990 FCGR1AP12314 374 aa11.21□□□□□ -0.62
POLR1B-202ENST00000333990 GNSP15586 552 aa11.21□□□□□ -0.62
POLR1B-202ENST00000333990 PFKLP17858 780 aa11.21□□□□□ -0.62
POLR1B-202ENST00000333990 LIMK2P53671 638 aa11.21□□□□□ -0.62
POLR1B-202ENST00000333990 RPL26P61254 145 aaKnown RBP11.21□□□□□ -0.62
POLR1B-202ENST00000333990 TCEAL1Q15170 157 aa11.21□□□□□ -0.62
POLR1B-202ENST00000333990 WLSQ5T9L3 541 aa11.21□□□□□ -0.62
POLR1B-202ENST00000333990 BHLHB9Q6PI77 547 aa11.21□□□□□ -0.62
POLR1B-202ENST00000333990 TMPRSS6Q8IU80 811 aa11.21□□□□□ -0.62
POLR1B-202ENST00000333990 ZBTB2Q8N680 514 aa11.21□□□□□ -0.62
POLR1B-202ENST00000333990 TADA1Q96BN2 335 aa11.21□□□□□ -0.62
POLR1B-202ENST00000333990 MFSD3Q96ES6 412 aa11.21□□□□□ -0.62
POLR1B-202ENST00000333990 TMEM237Q96Q45 408 aa11.21□□□□□ -0.62
POLR1B-202ENST00000333990 WDR6Q9NNW5 1121 aaKnown RBP11.21□□□□□ -0.62
POLR1B-202ENST00000333990 INTS10Q9NVR2 710 aaKnown RBP11.21□□□□□ -0.62
POLR1B-202ENST00000333990 RPL26L1Q9UNX3 145 aaKnown RBP11.21□□□□□ -0.62
POLR1B-202ENST00000333990 MARF1Q9Y4F3 1742 aaKnown RBP11.21□□□□□ -0.62
POLR1B-202ENST00000333990 AKAP11Q9UKA4 1901 aa11.21□□□□□ -0.62
POLR1B-202ENST00000333990 GSAPA4D1B5 854 aa11.2□□□□□ -0.62
POLR1B-202ENST00000333990 HCRTO43612 131 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms