RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 C9orf43Q8TAL5 461 aaPredicted RBP10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 ERLEC1Q96DZ1 483 aa10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 SLC47A1Q96FL8 570 aa10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 MMP19Q99542 508 aa10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 NT5C1AQ9BXI3 368 aa10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 ADGRE3Q9BY15 652 aa10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 ACSS3Q9H6R3 686 aa10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 ARL5AQ9Y689 179 aa10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 TP53BP1Q12888 1972 aaPredicted RBP10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 SH3BGRLO75368 114 aa10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 CRTAMO95727 393 aa10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 SHBGP04278 402 aa10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 RPL3P39023 403 aaKnown RBP10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 EFNA5P52803 228 aa10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 ADAM15Q13444 863 aa10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 PIH1D2Q8WWB5 315 aa10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 NECTIN3Q9NQS3 549 aa10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 KCNH4Q9UQ05 1017 aa10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 HSPB11Q9Y547 144 aa10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 JCADQ9P266 1359 aa10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 A0A075B6Q4 140 aa10.33□□□□□ -0.75
SPTBN1-201ENST00000333896 MCIDASD6RGH6 385 aa10.33□□□□□ -0.75
SPTBN1-201ENST00000333896 SGTAO43765 313 aa10.33□□□□□ -0.75
SPTBN1-201ENST00000333896 PPM1AP35813 382 aa10.33□□□□□ -0.75
SPTBN1-201ENST00000333896 ILF3Q12906 894 aaKnown RBP eCLIP10.33□□□□□ -0.754e-10■■■■■ 33.9
SPTBN1-201ENST00000333896 PPP3R2Q96LZ3 170 aa10.33□□□□□ -0.75
SPTBN1-201ENST00000333896 DMRTB1Q96MA1 342 aa10.33□□□□□ -0.75
SPTBN1-201ENST00000333896 ZNF416Q9BWM5 594 aa10.33□□□□□ -0.75
SPTBN1-201ENST00000333896 KBTBD4Q9NVX7 518 aa10.33□□□□□ -0.75
SPTBN1-201ENST00000333896 DPP3Q9NY33 737 aa10.33□□□□□ -0.75
SPTBN1-201ENST00000333896 NCANO14594 1321 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 CYP27B1O15528 508 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 GMFGO60234 142 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 SRCP12931 536 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 SLC7A1P30825 629 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 RGS6P49758 472 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 CIAPIN1Q6FI81 312 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 FOXR2Q6PJQ5 311 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 OAFQ86UD1 273 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 ANKRD13BQ86YJ7 626 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 SMURF2Q9HAU4 748 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 RAVER2Q9HCJ3 691 aaKnown RBP10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 BIN3Q9NQY0 253 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 KIAA1257Q9ULG3 409 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 AURKAO14965 403 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 RPS6KA4O75676 772 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 EPORP19235 508 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 CYP2A7P20853 494 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 RPL10AP62906 217 aaKnown RBP10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 PTPRNQ16849 979 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 TDRPQ86YL5 185 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 OR5T3Q8NGG3 340 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 NDOR1Q9UHB4 597 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 MAGED1Q9Y5V3 778 aaPredicted RBP10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 MSH4O15457 936 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 LINGO3P0C6S8 592 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 PET100P0DJ07 73 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 SLC6A4P31645 630 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 ZNF177Q13360 481 aaPredicted RBP10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 PTAR1Q7Z6K3 402 aaPredicted RBP10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 MMAAQ8IVH4 418 aaKnown RBP10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 ZNF431Q8TF32 576 aaPredicted RBP10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 COL26A1Q96A83 441 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 MKRN2Q9H000 416 aaKnown RBP10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 COPZ2Q9P299 210 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 ARHGAP20Q9P2F6 1191 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 PCDHGC3Q9UN70 934 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 OAS3Q9Y6K5 1087 aaKnown RBP10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 DNAJC13O75165 2243 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 CEBPAP49715 358 aaPredicted RBP10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 GPAT2Q6NUI2 795 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 AHCYL2Q96HN2 611 aaKnown RBP10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 REEP2Q9BRK0 252 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 SPATA5L1Q9BVQ7 753 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 ACTR6Q9GZN1 396 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 TMEM260Q9NX78 707 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 GATBO75879 557 aaKnown RBP10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 MLYCDO95822 493 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 SLC2A2P11168 524 aaPredicted RBP10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 LHCGRP22888 699 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 RAB5CP51148 216 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 ABRQ12979 859 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 LPCAT4Q643R3 524 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 OR4C6Q8NH72 309 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 STOML3Q8TAV4 291 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 RFKQ969G6 155 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 C17orf75Q9HAS0 396 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 SLAIN2Q9P270 581 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 TRAF6Q9Y4K3 522 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 IQSEC2Q5JU85 1478 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 CD83Q01151 205 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 UBXN11Q5T124 520 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 ZNF366Q8N895 744 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 OR56A4Q8NGH8 313 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 MARK4Q96L34 752 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 STRBPQ96SI9 672 aaKnown RBP10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 ATXN3LQ9H3M9 355 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 FANCFQ9NPI8 374 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 FEM1BQ9UK73 627 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms