RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 FADS2O95864 444 aaKnown RBP10.57□□□□□ -0.72
CLN8-201ENST00000331222 PLGP00747 810 aaPredicted RBP10.57□□□□□ -0.72
CLN8-201ENST00000331222 PRKCHP24723 683 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 KCNJ5P48544 419 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 CDH13P55290 713 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 LRP8Q14114 963 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 CARTPTQ16568 116 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 SLC34A3Q8N130 599 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 SLC24A2Q9UI40 661 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 C3orf18Q9UK00 162 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 GIT1Q9Y2X7 761 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 LRRC72A6NJI9 287 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 MAGEC1O60732 1142 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 ULK1O75385 1050 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 RSL1D1O76021 490 aaKnown RBP10.57□□□□□ -0.72
CLN8-201ENST00000331222 FCER2P06734 321 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 ADRA1DP25100 572 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 CORO1AP31146 461 aaKnown RBP10.57□□□□□ -0.72
CLN8-201ENST00000331222 ITGA1P56199 1179 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 CDC42P60953 191 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 USP4Q13107 963 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 GPRIN3Q6ZVF9 776 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 CHST15Q7LFX5 561 aaPredicted RBP10.57□□□□□ -0.72
CLN8-201ENST00000331222 POC5Q8NA72 575 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 MBOAT7Q96N66 472 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 PARPBPQ9NWS1 579 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 TMEM216Q9P0N5 145 aa10.57□□□□□ -0.72
CLN8-201ENST00000331222 MYH15Q9Y2K3 1946 aa10.56□□□□□ -0.72
CLN8-201ENST00000331222 YDJCA8MPS7 323 aa10.56□□□□□ -0.72
CLN8-201ENST00000331222 ZNF879B4DU55 563 aa10.56□□□□□ -0.72
CLN8-201ENST00000331222 C9JVG2 144 aa10.56□□□□□ -0.72
CLN8-201ENST00000331222 GNRH1P01148 92 aa10.56□□□□□ -0.72
CLN8-201ENST00000331222 UGT2B4P06133 528 aa10.56□□□□□ -0.72
CLN8-201ENST00000331222 PPIDQ08752 370 aaKnown RBP10.56□□□□□ -0.72
CLN8-201ENST00000331222 IL18Q14116 193 aa10.56□□□□□ -0.72
CLN8-201ENST00000331222 NR1D2Q14995 579 aa10.56□□□□□ -0.72
CLN8-201ENST00000331222 PARP6Q2NL67 630 aa10.56□□□□□ -0.72
CLN8-201ENST00000331222 TMC3Q7Z5M5 1100 aa10.56□□□□□ -0.72
CLN8-201ENST00000331222 DAGLBQ8NCG7 672 aa10.56□□□□□ -0.72
CLN8-201ENST00000331222 DUS2Q9NX74 493 aaKnown RBP10.56□□□□□ -0.72
CLN8-201ENST00000331222 EVLQ9UI08 416 aaPredicted RBP10.56□□□□□ -0.72
CLN8-201ENST00000331222 PLAGL2Q9UPG8 496 aa10.56□□□□□ -0.72
CLN8-201ENST00000331222 SNRPB2P08579 225 aaKnown RBP10.56□□□□□ -0.72
CLN8-201ENST00000331222 CHRM5P08912 532 aaPredicted RBP10.56□□□□□ -0.72
CLN8-201ENST00000331222 CHKAP35790 457 aa10.56□□□□□ -0.72
CLN8-201ENST00000331222 RPL14P50914 215 aaKnown RBP10.56□□□□□ -0.72
CLN8-201ENST00000331222 SLC13A2Q13183 592 aa10.56□□□□□ -0.72
CLN8-201ENST00000331222 ZNF846Q147U1 533 aa10.56□□□□□ -0.72
CLN8-201ENST00000331222 PCID2Q5JVF3 399 aa10.56□□□□□ -0.72
CLN8-201ENST00000331222 FAM46CQ5VWP2 391 aa10.56□□□□□ -0.72
CLN8-201ENST00000331222 IKBIPQ70UQ0 350 aa10.56□□□□□ -0.72
CLN8-201ENST00000331222 LRRN4CLQ8ND94 238 aa10.56□□□□□ -0.72
CLN8-201ENST00000331222 FAR1Q8WVX9 515 aa10.56□□□□□ -0.72
CLN8-201ENST00000331222 PLEKHA1Q9HB21 404 aa10.56□□□□□ -0.72
CLN8-201ENST00000331222 MYH9P35579 1960 aaKnown RBP10.56□□□□□ -0.72
CLN8-201ENST00000331222 EPHA3P29320 983 aa10.56□□□□□ -0.72
CLN8-201ENST00000331222 TIE1P35590 1138 aa10.56□□□□□ -0.72
CLN8-201ENST00000331222 ZBTB6Q15916 424 aa10.56□□□□□ -0.72
CLN8-201ENST00000331222 PLEKHG4Q58EX7 1191 aa10.56□□□□□ -0.72
CLN8-201ENST00000331222 NAIF1Q69YI7 327 aaPredicted RBP10.56□□□□□ -0.72
CLN8-201ENST00000331222 MZT2BQ6NZ67 158 aa10.56□□□□□ -0.72
CLN8-201ENST00000331222 CHST9Q7L1S5 443 aa10.56□□□□□ -0.72
CLN8-201ENST00000331222 NECTIN3Q9NQS3 549 aa10.56□□□□□ -0.72
CLN8-201ENST00000331222 ZC3H13Q5T200 1668 aaKnown RBP10.56□□□□□ -0.72
CLN8-201ENST00000331222 HCN1O60741 890 aa10.56□□□□□ -0.72
CLN8-201ENST00000331222 GCATO75600 419 aa10.56□□□□□ -0.72
CLN8-201ENST00000331222 MT-ND1P03886 318 aa10.56□□□□□ -0.72
CLN8-201ENST00000331222 ARL3P36405 182 aa10.56□□□□□ -0.72
CLN8-201ENST00000331222 PDX1P52945 283 aa10.56□□□□□ -0.72
CLN8-201ENST00000331222 PLGLB1Q02325 96 aa10.56□□□□□ -0.72
CLN8-201ENST00000331222 OC90Q02509 493 aaPredicted RBP10.56□□□□□ -0.72
CLN8-201ENST00000331222 C2orf80Q0P641 193 aa10.56□□□□□ -0.72
CLN8-201ENST00000331222 PPP1R15BQ5SWA1 713 aa10.56□□□□□ -0.72
CLN8-201ENST00000331222 GPR107Q5VW38 600 aa10.56□□□□□ -0.72
CLN8-201ENST00000331222 OR4L1Q8NH43 312 aa10.56□□□□□ -0.72
CLN8-201ENST00000331222 MTMR9Q96QG7 549 aa10.56□□□□□ -0.72
CLN8-201ENST00000331222 INTS10Q9NVR2 710 aaKnown RBP10.56□□□□□ -0.72
CLN8-201ENST00000331222 ERGIC3Q9Y282 383 aa10.56□□□□□ -0.72
CLN8-201ENST00000331222 A2ML1A8K2U0 1454 aa10.56□□□□□ -0.72
CLN8-201ENST00000331222 CNTNAP1P78357 1384 aa10.56□□□□□ -0.72
CLN8-201ENST00000331222 SLC28A1O00337 649 aa10.56□□□□□ -0.72
CLN8-201ENST00000331222 HSD3B2P26439 372 aa10.56□□□□□ -0.72
CLN8-201ENST00000331222 RXRGP48443 463 aa10.56□□□□□ -0.72
CLN8-201ENST00000331222 RIN1Q13671 783 aa10.56□□□□□ -0.72
CLN8-201ENST00000331222 TMEM86AQ8N2M4 240 aa10.56□□□□□ -0.72
CLN8-201ENST00000331222 Q8N9G6 341 aaPredicted RBP10.56□□□□□ -0.72
CLN8-201ENST00000331222 COPG2Q9UBF2 871 aa10.56□□□□□ -0.72
CLN8-201ENST00000331222 A0A0U1RQJ8 604 aa10.56□□□□□ -0.72
CLN8-201ENST00000331222 HACD1B0YJ81 288 aa10.56□□□□□ -0.72
CLN8-201ENST00000331222 FKBP6O75344 327 aa10.56□□□□□ -0.72
CLN8-201ENST00000331222 FAM155BO75949 473 aa10.56□□□□□ -0.72
CLN8-201ENST00000331222 PRKCGP05129 697 aa10.56□□□□□ -0.72
CLN8-201ENST00000331222 CCNOP22674 350 aa10.56□□□□□ -0.72
CLN8-201ENST00000331222 FLT3LGP49771 235 aa10.56□□□□□ -0.72
CLN8-201ENST00000331222 CBX3Q13185 183 aa10.56□□□□□ -0.72
CLN8-201ENST00000331222 MSLNQ13421 630 aaPredicted RBP10.56□□□□□ -0.72
CLN8-201ENST00000331222 MYBPC3Q14896 1274 aa10.56□□□□□ -0.72
CLN8-201ENST00000331222 TAB1Q15750 504 aa10.56□□□□□ -0.72
CLN8-201ENST00000331222 C2orf27AQ580R0 203 aa10.56□□□□□ -0.72
CLN8-201ENST00000331222 TAPT1Q6NXT6 567 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms