RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 HTR1AP08908 422 aa24.32■■□□□ 1.48
SOX1-201ENST00000330949 MTHFD1P11586 935 aaKnown RBP24.32■■□□□ 1.48
SOX1-201ENST00000330949 CXCR2P25025 360 aa24.32■■□□□ 1.48
SOX1-201ENST00000330949 FOXM1Q08050 763 aa24.32■■□□□ 1.48
SOX1-201ENST00000330949 CARTPTQ16568 116 aa24.32■■□□□ 1.48
SOX1-201ENST00000330949 TTC23Q5W5X9 447 aa24.32■■□□□ 1.48
SOX1-201ENST00000330949 LARP4Q71RC2 724 aaKnown RBP eCLIP24.32■■□□□ 1.48
SOX1-201ENST00000330949 SIX4Q9UIU6 781 aa24.32■■□□□ 1.48
SOX1-201ENST00000330949 SCO2O43819 266 aa24.32■■□□□ 1.48
SOX1-201ENST00000330949 IDH3BO43837 385 aa24.32■■□□□ 1.48
SOX1-201ENST00000330949 STMN1P16949 149 aa24.32■■□□□ 1.48
SOX1-201ENST00000330949 POLD2P49005 469 aa24.32■■□□□ 1.48
SOX1-201ENST00000330949 SLC13A2Q13183 592 aa24.32■■□□□ 1.48
SOX1-201ENST00000330949 UGP2Q16851 508 aa24.32■■□□□ 1.48
SOX1-201ENST00000330949 C6orf141Q5SZD1 244 aa24.32■■□□□ 1.48
SOX1-201ENST00000330949 MICALL2Q8IY33 904 aa24.32■■□□□ 1.48
SOX1-201ENST00000330949 OR13J1Q8NGT2 312 aa24.32■■□□□ 1.48
SOX1-201ENST00000330949 SLC30A3Q99726 388 aa24.32■■□□□ 1.48
SOX1-201ENST00000330949 FXYD1O00168 92 aa24.31■■□□□ 1.48
SOX1-201ENST00000330949 CDH1P12830 882 aa24.31■■□□□ 1.48
SOX1-201ENST00000330949 CYP3A5P20815 502 aa24.31■■□□□ 1.48
SOX1-201ENST00000330949 GP2P55259 537 aaKnown RBP24.31■■□□□ 1.48
SOX1-201ENST00000330949 TPD52P55327 224 aaPredicted RBP24.31■■□□□ 1.48
SOX1-201ENST00000330949 DAG1Q14118 895 aa24.31■■□□□ 1.48
SOX1-201ENST00000330949 TMC5Q6UXY8 1006 aa24.31■■□□□ 1.48
SOX1-201ENST00000330949 EXOC8Q8IYI6 725 aa24.31■■□□□ 1.48
SOX1-201ENST00000330949 ZNF280CQ8ND82 737 aa24.31■■□□□ 1.48
SOX1-201ENST00000330949 RHOXF1Q8NHV9 184 aa24.31■■□□□ 1.48
SOX1-201ENST00000330949 PSMA8Q8TAA3 256 aa24.31■■□□□ 1.48
SOX1-201ENST00000330949 GABPB2Q8TAK5 448 aaPredicted RBP24.31■■□□□ 1.48
SOX1-201ENST00000330949 GLMNQ92990 594 aa24.31■■□□□ 1.48
SOX1-201ENST00000330949 KLHL8Q9P2G9 620 aaPredicted RBP24.31■■□□□ 1.48
SOX1-201ENST00000330949 ALDH7A1P49419 539 aaKnown RBP24.31■■□□□ 1.48
SOX1-201ENST00000330949 TOP3AQ13472 1001 aaPredicted RBP24.31■■□□□ 1.48
SOX1-201ENST00000330949 CAPRIN1Q14444 709 aaKnown RBP24.31■■□□□ 1.48
SOX1-201ENST00000330949 CERCAMQ5T4B2 595 aa24.31■■□□□ 1.48
SOX1-201ENST00000330949 C11orf74Q86VG3 221 aa24.31■■□□□ 1.48
SOX1-201ENST00000330949 PTRH1Q86Y79 214 aaKnown RBP24.31■■□□□ 1.48
SOX1-201ENST00000330949 AFG1LQ8WV93 481 aa24.31■■□□□ 1.48
SOX1-201ENST00000330949 ZNF99A8MXY4 864 aaPredicted RBP24.3■■□□□ 1.48
SOX1-201ENST00000330949 SEC24AO95486 1093 aa24.3■■□□□ 1.48
SOX1-201ENST00000330949 PFKMP08237 780 aa24.3■■□□□ 1.48
SOX1-201ENST00000330949 NPY2RP49146 381 aa24.3■■□□□ 1.48
SOX1-201ENST00000330949 IMPG1Q17R60 797 aa24.3■■□□□ 1.48
SOX1-201ENST00000330949 DPY19L1Q2PZI1 675 aa24.3■■□□□ 1.48
SOX1-201ENST00000330949 LRRC58Q96CX6 371 aa24.3■■□□□ 1.48
SOX1-201ENST00000330949 AURKBQ96GD4 344 aaPredicted RBP24.3■■□□□ 1.48
SOX1-201ENST00000330949 TNFRSF12AQ9NP84 129 aa24.3■■□□□ 1.48
SOX1-201ENST00000330949 FAM49BQ9NUQ9 324 aa24.3■■□□□ 1.48
SOX1-201ENST00000330949 RCOR3Q9P2K3 495 aaPredicted RBP24.3■■□□□ 1.48
SOX1-201ENST00000330949 KIAA1257Q9ULG3 409 aa24.3■■□□□ 1.48
SOX1-201ENST00000330949 UPK1BO75841 260 aa24.3■■□□□ 1.48
SOX1-201ENST00000330949 INMTO95050 263 aa24.3■■□□□ 1.48
SOX1-201ENST00000330949 PGK1P00558 417 aa24.3■■□□□ 1.48
SOX1-201ENST00000330949 KRT8P05787 483 aa24.3■■□□□ 1.48
SOX1-201ENST00000330949 ATXN1P54253 815 aaKnown RBP24.3■■□□□ 1.48
SOX1-201ENST00000330949 VAC14Q08AM6 782 aa24.3■■□□□ 1.48
SOX1-201ENST00000330949 GALNT1Q10472 559 aaPredicted RBP24.3■■□□□ 1.48
SOX1-201ENST00000330949 FAM83EQ2M2I3 478 aa24.3■■□□□ 1.48
SOX1-201ENST00000330949 VPS26BQ4G0F5 336 aa24.3■■□□□ 1.48
SOX1-201ENST00000330949 SCUBE3Q8IX30 993 aa24.3■■□□□ 1.48
SOX1-201ENST00000330949 CLEC4FQ8N1N0 589 aa24.3■■□□□ 1.48
SOX1-201ENST00000330949 NDNFQ8TB73 568 aa24.3■■□□□ 1.48
SOX1-201ENST00000330949 ALG2Q9H553 416 aa24.3■■□□□ 1.48
SOX1-201ENST00000330949 TLL2Q9Y6L7 1015 aa24.3■■□□□ 1.48
SOX1-201ENST00000330949 ALPLP05186 524 aa24.3■■□□□ 1.48
SOX1-201ENST00000330949 EIF2DP41214 584 aaKnown RBP24.3■■□□□ 1.48
SOX1-201ENST00000330949 CASP3P42574 277 aa24.3■■□□□ 1.48
SOX1-201ENST00000330949 CHRNEQ04844 493 aa24.3■■□□□ 1.48
SOX1-201ENST00000330949 SELPLGQ14242 412 aa24.3■■□□□ 1.48
SOX1-201ENST00000330949 ZNF460Q14592 562 aa24.3■■□□□ 1.48
SOX1-201ENST00000330949 GEN1Q17RS7 908 aa24.3■■□□□ 1.48
SOX1-201ENST00000330949 PMF1Q6P1K2 205 aa24.3■■□□□ 1.48
SOX1-201ENST00000330949 SPATA6LQ8N4H0 392 aa24.3■■□□□ 1.48
SOX1-201ENST00000330949 CHAC2Q8WUX2 184 aa24.3■■□□□ 1.48
SOX1-201ENST00000330949 TP53INP1Q96A56 240 aa24.3■■□□□ 1.48
SOX1-201ENST00000330949 RDH12Q96NR8 316 aa24.3■■□□□ 1.48
SOX1-201ENST00000330949 NODALQ96S42 347 aa24.3■■□□□ 1.48
SOX1-201ENST00000330949 TRIM54Q9BYV2 358 aa24.3■■□□□ 1.48
SOX1-201ENST00000330949 CNGB3Q9NQW8 809 aa24.3■■□□□ 1.48
SOX1-201ENST00000330949 ERI2A8K979 691 aaKnown RBP24.29■■□□□ 1.48
SOX1-201ENST00000330949 CAPN15O75808 1086 aa24.29■■□□□ 1.48
SOX1-201ENST00000330949 TNFAIP1Q13829 316 aa24.29■■□□□ 1.48
SOX1-201ENST00000330949 EML3Q32P44 896 aa24.29■■□□□ 1.48
SOX1-201ENST00000330949 ADPRMQ3LIE5 342 aa24.29■■□□□ 1.48
SOX1-201ENST00000330949 DDX59Q5T1V6 619 aaKnown RBP eCLIP24.29■■□□□ 1.48
SOX1-201ENST00000330949 NT5DC4Q86YG4 428 aa24.29■■□□□ 1.48
SOX1-201ENST00000330949 LYSMD2Q8IV50 215 aa24.29■■□□□ 1.48
SOX1-201ENST00000330949 CHDHQ8NE62 594 aaPredicted RBP24.29■■□□□ 1.48
SOX1-201ENST00000330949 TRAPPC12Q8WVT3 735 aa24.29■■□□□ 1.48
SOX1-201ENST00000330949 CENPIQ92674 756 aaPredicted RBP24.29■■□□□ 1.48
SOX1-201ENST00000330949 MED30Q96HR3 178 aa24.29■■□□□ 1.48
SOX1-201ENST00000330949 KCTD14Q9BQ13 255 aaPredicted RBP24.29■■□□□ 1.48
SOX1-201ENST00000330949 CHID1Q9BWS9 393 aa24.29■■□□□ 1.48
SOX1-201ENST00000330949 PRDM12Q9H4Q4 367 aa24.29■■□□□ 1.48
SOX1-201ENST00000330949 ACAD9Q9H845 621 aa24.29■■□□□ 1.48
SOX1-201ENST00000330949 FBRSL1Q9HCM7 1045 aaKnown RBP24.29■■□□□ 1.48
SOX1-201ENST00000330949 PCDHGA8Q9Y5G5 932 aa24.29■■□□□ 1.48
SOX1-201ENST00000330949 PCDHA9Q9Y5H5 950 aa24.29■■□□□ 1.48
SOX1-201ENST00000330949 NEMP2A6NFY4 417 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms