RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 SCARF2Q96GP6 870 aaPredicted RBP13.57□□□□□ -0.24
GTF3C6-201ENST00000329970 FCRL3Q96P31 734 aaPredicted RBP13.57□□□□□ -0.24
GTF3C6-201ENST00000329970 LYSMD1Q96S90 227 aa13.57□□□□□ -0.24
GTF3C6-201ENST00000329970 FRMD8Q9BZ67 464 aaPredicted RBP13.57□□□□□ -0.24
GTF3C6-201ENST00000329970 TMEM168Q9H0V1 697 aa13.57□□□□□ -0.24
GTF3C6-201ENST00000329970 MRPL40Q9NQ50 206 aaKnown RBP13.57□□□□□ -0.24
GTF3C6-201ENST00000329970 TRNAU1APQ9NX07 287 aaKnown RBP13.57□□□□□ -0.24
GTF3C6-201ENST00000329970 SIRPGQ9P1W8 387 aa13.57□□□□□ -0.24
GTF3C6-201ENST00000329970 CTTNBP2NLQ9P2B4 639 aa13.57□□□□□ -0.24
GTF3C6-201ENST00000329970 SLC17A4Q9Y2C5 497 aa13.57□□□□□ -0.24
GTF3C6-201ENST00000329970 RAI2Q9Y5P3 530 aa13.57□□□□□ -0.24
GTF3C6-201ENST00000329970 COL6A6A6NMZ7 2263 aa13.56□□□□□ -0.24
GTF3C6-201ENST00000329970 A0A0J9YYE9 177 aa13.56□□□□□ -0.24
GTF3C6-201ENST00000329970 A8MX80 341 aa13.56□□□□□ -0.24
GTF3C6-201ENST00000329970 ATXN7O15265 892 aaPredicted RBP13.56□□□□□ -0.24
GTF3C6-201ENST00000329970 CBFA2T2O43439 604 aa13.56□□□□□ -0.24
GTF3C6-201ENST00000329970 TRBC1P01850 177 aa13.56□□□□□ -0.24
GTF3C6-201ENST00000329970 CEACAM5P06731 702 aa13.56□□□□□ -0.24
GTF3C6-201ENST00000329970 IVLP07476 585 aa13.56□□□□□ -0.24
GTF3C6-201ENST00000329970 ITGA2BP08514 1039 aa13.56□□□□□ -0.24
GTF3C6-201ENST00000329970 TMEM253P0C7T8 217 aa13.56□□□□□ -0.24
GTF3C6-201ENST00000329970 CCNB1P14635 433 aa13.56□□□□□ -0.24
GTF3C6-201ENST00000329970 CA4P22748 312 aa13.56□□□□□ -0.24
GTF3C6-201ENST00000329970 ETV3P41162 512 aa13.56□□□□□ -0.24
GTF3C6-201ENST00000329970 TMPRSS3P57727 454 aa13.56□□□□□ -0.24
GTF3C6-201ENST00000329970 RPL26P61254 145 aaKnown RBP13.56□□□□□ -0.24
GTF3C6-201ENST00000329970 CCDC173Q0VFZ6 552 aa13.56□□□□□ -0.24
GTF3C6-201ENST00000329970 PEX6Q13608 980 aa13.56□□□□□ -0.24
GTF3C6-201ENST00000329970 COL9A2Q14055 689 aaPredicted RBP13.56□□□□□ -0.24
GTF3C6-201ENST00000329970 NR1D2Q14995 579 aa13.56□□□□□ -0.24
GTF3C6-201ENST00000329970 CLPPQ16740 277 aaPredicted RBP13.56□□□□□ -0.24
GTF3C6-201ENST00000329970 SKOR2Q2VWA4 1001 aaPredicted RBP13.56□□□□□ -0.24
GTF3C6-201ENST00000329970 ATP13A4Q4VNC1 1196 aa13.56□□□□□ -0.24
GTF3C6-201ENST00000329970 BROXQ5VW32 411 aa13.56□□□□□ -0.24
GTF3C6-201ENST00000329970 HSD11B1LQ7Z5J1 315 aa13.56□□□□□ -0.24
GTF3C6-201ENST00000329970 TAF8Q7Z7C8 310 aa13.56□□□□□ -0.24
GTF3C6-201ENST00000329970 KCTD6Q8NC69 237 aa13.56□□□□□ -0.24
GTF3C6-201ENST00000329970 KIAA1524Q8TCG1 905 aa13.56□□□□□ -0.24
GTF3C6-201ENST00000329970 KCNE4Q8WWG9 221 aa13.56□□□□□ -0.24
GTF3C6-201ENST00000329970 TMEM74Q96NL1 305 aa13.56□□□□□ -0.24
GTF3C6-201ENST00000329970 GFM1Q96RP9 751 aaKnown RBP13.56□□□□□ -0.24
GTF3C6-201ENST00000329970 SEMA3CQ99985 751 aa13.56□□□□□ -0.24
GTF3C6-201ENST00000329970 TDRD1Q9BXT4 1180 aaKnown RBP13.56□□□□□ -0.24
GTF3C6-201ENST00000329970 LRRN3Q9H3W5 708 aa13.56□□□□□ -0.24
GTF3C6-201ENST00000329970 CYP4F12Q9HCS2 524 aa13.56□□□□□ -0.24
GTF3C6-201ENST00000329970 NT5MQ9NPB1 228 aa13.56□□□□□ -0.24
GTF3C6-201ENST00000329970 ACSL6Q9UKU0 697 aa13.56□□□□□ -0.24
GTF3C6-201ENST00000329970 RPL26L1Q9UNX3 145 aaKnown RBP13.56□□□□□ -0.24
GTF3C6-201ENST00000329970 CAPN8A6NHC0 703 aa13.55□□□□□ -0.24
GTF3C6-201ENST00000329970 MTA2O94776 668 aa13.55□□□□□ -0.24
GTF3C6-201ENST00000329970 SOD1P00441 154 aa13.55□□□□□ -0.24
GTF3C6-201ENST00000329970 RPLP0P05388 317 aaKnown RBP13.55□□□□□ -0.24
GTF3C6-201ENST00000329970 PDHA1P08559 390 aa13.55□□□□□ -0.24
GTF3C6-201ENST00000329970 SSR1P43307 286 aaKnown RBP13.55□□□□□ -0.24
GTF3C6-201ENST00000329970 TAS2R40P59535 323 aa13.55□□□□□ -0.24
GTF3C6-201ENST00000329970 CCL7P80098 99 aa13.55□□□□□ -0.24
GTF3C6-201ENST00000329970 ADAMTSL4Q6UY14 1074 aa13.55□□□□□ -0.24
GTF3C6-201ENST00000329970 Q6ZVL8 140 aa13.55□□□□□ -0.24
GTF3C6-201ENST00000329970 ZNF438Q7Z4V0 828 aa13.55□□□□□ -0.24
GTF3C6-201ENST00000329970 SPRED1Q7Z699 444 aa13.55□□□□□ -0.24
GTF3C6-201ENST00000329970 CCNJLQ8IV13 435 aa13.55□□□□□ -0.24
GTF3C6-201ENST00000329970 PQLC3Q8N755 202 aa13.55□□□□□ -0.24
GTF3C6-201ENST00000329970 FAM46DQ8NEK8 389 aa13.55□□□□□ -0.24
GTF3C6-201ENST00000329970 ARRDC2Q8TBH0 407 aa13.55□□□□□ -0.24
GTF3C6-201ENST00000329970 TMEM159Q96B96 161 aa13.55□□□□□ -0.24
GTF3C6-201ENST00000329970 GSDMCQ9BYG8 508 aa13.55□□□□□ -0.24
GTF3C6-201ENST00000329970 STRADBQ9C0K7 418 aa13.55□□□□□ -0.24
GTF3C6-201ENST00000329970 CARS2Q9HA77 564 aaKnown RBP13.55□□□□□ -0.24
GTF3C6-201ENST00000329970 PCDHGA7Q9Y5G6 932 aa13.55□□□□□ -0.24
GTF3C6-201ENST00000329970 PLD2O14939 933 aa13.54□□□□□ -0.24
GTF3C6-201ENST00000329970 CASC3O15234 703 aaKnown RBP13.54□□□□□ -0.24
GTF3C6-201ENST00000329970 FUCA1P04066 466 aa13.54□□□□□ -0.24
GTF3C6-201ENST00000329970 KDELR1P24390 212 aa13.54□□□□□ -0.24
GTF3C6-201ENST00000329970 ARHGAP25P42331 645 aa13.54□□□□□ -0.24
GTF3C6-201ENST00000329970 INHBCP55103 352 aa13.54□□□□□ -0.24
GTF3C6-201ENST00000329970 PTSQ03393 145 aa13.54□□□□□ -0.24
GTF3C6-201ENST00000329970 ZFP36L1Q07352 338 aaKnown RBP13.54□□□□□ -0.24
GTF3C6-201ENST00000329970 ILF3Q12906 894 aaKnown RBP eCLIP13.54□□□□□ -0.24
GTF3C6-201ENST00000329970 IHHQ14623 411 aa13.54□□□□□ -0.24
GTF3C6-201ENST00000329970 LRRC66Q68CR7 880 aa13.54□□□□□ -0.24
GTF3C6-201ENST00000329970 RAET1GQ6H3X3 334 aa13.54□□□□□ -0.24
GTF3C6-201ENST00000329970 TSPAN33Q86UF1 283 aa13.54□□□□□ -0.24
GTF3C6-201ENST00000329970 NRROSQ86YC3 692 aa13.54□□□□□ -0.24
GTF3C6-201ENST00000329970 RHOT2Q8IXI1 618 aa13.54□□□□□ -0.24
GTF3C6-201ENST00000329970 NRSN1Q8IZ57 195 aa13.54□□□□□ -0.24
GTF3C6-201ENST00000329970 CCL4L1Q8NHW4 92 aa13.54□□□□□ -0.24
GTF3C6-201ENST00000329970 WBP1Q96G27 269 aa13.54□□□□□ -0.24
GTF3C6-201ENST00000329970 RNF157Q96PX1 679 aa13.54□□□□□ -0.24
GTF3C6-201ENST00000329970 PACSIN1Q9BY11 444 aa13.54□□□□□ -0.24
GTF3C6-201ENST00000329970 ABCG8Q9H221 673 aa13.54□□□□□ -0.24
GTF3C6-201ENST00000329970 DPEP2Q9H4A9 486 aa13.54□□□□□ -0.24
GTF3C6-201ENST00000329970 RBM22Q9NW64 420 aaKnown RBP eCLIP13.54□□□□□ -0.24
GTF3C6-201ENST00000329970 SUFUQ9UMX1 484 aa13.54□□□□□ -0.24
GTF3C6-201ENST00000329970 ATMQ13315 3056 aa13.54□□□□□ -0.24
GTF3C6-201ENST00000329970 B4DGG1 531 aa13.53□□□□□ -0.24
GTF3C6-201ENST00000329970 ERVH48-1M5A8F1 160 aa13.53□□□□□ -0.24
GTF3C6-201ENST00000329970 ZW10O43264 779 aa13.53□□□□□ -0.24
GTF3C6-201ENST00000329970 KALRNO60229 2985 aa13.53□□□□□ -0.24
GTF3C6-201ENST00000329970 PRLP01236 227 aa13.53□□□□□ -0.24
GTF3C6-201ENST00000329970 GPR1P46091 355 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 321.4 ms