RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 ADGRF1Q5T601 910 aa11.41□□□□□ -0.58
COL4A5-201ENST00000328300 TAPT1Q6NXT6 567 aa11.41□□□□□ -0.58
COL4A5-201ENST00000328300 UBE2R2Q712K3 238 aaPredicted RBP11.41□□□□□ -0.58
COL4A5-201ENST00000328300 PROSER1Q86XN7 944 aa11.41□□□□□ -0.58
COL4A5-201ENST00000328300 COLGALT2Q8IYK4 626 aa11.41□□□□□ -0.58
COL4A5-201ENST00000328300 ULK2Q8IYT8 1036 aa11.41□□□□□ -0.58
COL4A5-201ENST00000328300 DNAJB8Q8NHS0 232 aa11.41□□□□□ -0.58
COL4A5-201ENST00000328300 PPP1R13LQ8WUF5 828 aa11.41□□□□□ -0.58
COL4A5-201ENST00000328300 IKZF4Q9H2S9 585 aa11.41□□□□□ -0.58
COL4A5-201ENST00000328300 RHBDL2Q9NX52 303 aa11.41□□□□□ -0.58
COL4A5-201ENST00000328300 PNMA8BQ9ULN7 279 aaPredicted RBP11.41□□□□□ -0.58
COL4A5-201ENST00000328300 TPRKBQ9Y3C4 175 aa11.41□□□□□ -0.58
COL4A5-201ENST00000328300 TIAM2Q8IVF5 1701 aa11.41□□□□□ -0.58
COL4A5-201ENST00000328300 PIRO00625 290 aa11.41□□□□□ -0.58
COL4A5-201ENST00000328300 DCXO43602 365 aa11.41□□□□□ -0.58
COL4A5-201ENST00000328300 EDF1O60869 148 aaKnown RBP11.41□□□□□ -0.58
COL4A5-201ENST00000328300 SOD2P04179 222 aa11.41□□□□□ -0.58
COL4A5-201ENST00000328300 MYBL2P10244 700 aa11.41□□□□□ -0.58
COL4A5-201ENST00000328300 HAPLN1P10915 354 aaPredicted RBP11.41□□□□□ -0.58
COL4A5-201ENST00000328300 PTGIRP43119 386 aa11.41□□□□□ -0.58
COL4A5-201ENST00000328300 ALG11Q2TAA5 492 aa11.41□□□□□ -0.58
COL4A5-201ENST00000328300 CASP12Q6UXS9 341 aa11.41□□□□□ -0.58
COL4A5-201ENST00000328300 ZYG11AQ6WRX3 759 aa11.41□□□□□ -0.58
COL4A5-201ENST00000328300 OTOP2Q7RTS6 562 aa11.41□□□□□ -0.58
COL4A5-201ENST00000328300 CELF5Q8N6W0 485 aaKnown RBP11.41□□□□□ -0.58
COL4A5-201ENST00000328300 SNRNP27Q8WVK2 155 aaKnown RBP11.41□□□□□ -0.58
COL4A5-201ENST00000328300 LENG1Q96BZ8 264 aaPredicted RBP11.41□□□□□ -0.58
COL4A5-201ENST00000328300 PCDHGB3Q9Y5G1 929 aa11.41□□□□□ -0.58
COL4A5-201ENST00000328300 LRRN4CLQ8ND94 238 aa11.41□□□□□ -0.58
COL4A5-201ENST00000328300 MRTO4Q9UKD2 239 aaKnown RBP11.41□□□□□ -0.58
COL4A5-201ENST00000328300 UNC5CO95185 931 aa11.4□□□□□ -0.58
COL4A5-201ENST00000328300 TNK2Q07912 1038 aa11.4□□□□□ -0.58
COL4A5-201ENST00000328300 ERICH5Q6P6B1 374 aa11.4□□□□□ -0.58
COL4A5-201ENST00000328300 TRIM40Q6P9F5 258 aa11.4□□□□□ -0.58
COL4A5-201ENST00000328300 FAM151BQ6UXP7 276 aa11.4□□□□□ -0.58
COL4A5-201ENST00000328300 OR4K2Q8NGD2 314 aa11.4□□□□□ -0.58
COL4A5-201ENST00000328300 ZFRQ96KR1 1074 aaKnown RBP11.4□□□□□ -0.58
COL4A5-201ENST00000328300 RHOBTB2Q9BYZ6 727 aa11.4□□□□□ -0.58
COL4A5-201ENST00000328300 R3HDM2Q9Y2K5 976 aaKnown RBP11.4□□□□□ -0.58
COL4A5-201ENST00000328300 ATP6V1G2O95670 118 aa11.4□□□□□ -0.58
COL4A5-201ENST00000328300 CTPS1P17812 591 aa11.4□□□□□ -0.58
COL4A5-201ENST00000328300 LMO2P25791 158 aa11.4□□□□□ -0.58
COL4A5-201ENST00000328300 SERPINB1P30740 379 aa11.4□□□□□ -0.58
COL4A5-201ENST00000328300 TRAF2Q12933 501 aa11.4□□□□□ -0.58
COL4A5-201ENST00000328300 GPM6BQ13491 265 aa11.4□□□□□ -0.58
COL4A5-201ENST00000328300 MAPKAPK3Q16644 382 aa11.4□□□□□ -0.58
COL4A5-201ENST00000328300 NDUFA9Q16795 377 aa11.4□□□□□ -0.58
COL4A5-201ENST00000328300 AAGABQ6PD74 315 aa11.4□□□□□ -0.58
COL4A5-201ENST00000328300 GPR180Q86V85 440 aa11.4□□□□□ -0.58
COL4A5-201ENST00000328300 SPPL2AQ8TCT8 520 aa11.4□□□□□ -0.58
COL4A5-201ENST00000328300 HMCESQ96FZ2 354 aa11.4□□□□□ -0.58
COL4A5-201ENST00000328300 HSD3B7Q9H2F3 369 aa11.4□□□□□ -0.58
COL4A5-201ENST00000328300 CHKBQ9Y259 395 aa11.4□□□□□ -0.58
COL4A5-201ENST00000328300 FAM58BPP0C7Q3 252 aa11.4□□□□□ -0.58
COL4A5-201ENST00000328300 XIAPP98170 497 aa11.4□□□□□ -0.58
COL4A5-201ENST00000328300 GRSF1Q12849 480 aaKnown RBP eCLIP11.4□□□□□ -0.58
COL4A5-201ENST00000328300 CARD16Q5EG05 197 aa11.4□□□□□ -0.58
COL4A5-201ENST00000328300 TJAP1Q5JTD0 557 aa11.4□□□□□ -0.58
COL4A5-201ENST00000328300 C16orf46Q6P387 395 aa11.4□□□□□ -0.58
COL4A5-201ENST00000328300 ZNF786Q8N393 782 aa11.4□□□□□ -0.58
COL4A5-201ENST00000328300 SLC35B2Q8TB61 432 aa11.4□□□□□ -0.58
COL4A5-201ENST00000328300 SLC35F5Q8WV83 523 aa11.4□□□□□ -0.58
COL4A5-201ENST00000328300 ERVK-5Q9HDB9 667 aa11.4□□□□□ -0.58
COL4A5-201ENST00000328300 BPIFA1Q9NP55 256 aa11.4□□□□□ -0.58
COL4A5-201ENST00000328300 DNAAF2Q9NVR5 837 aaKnown RBP11.4□□□□□ -0.58
COL4A5-201ENST00000328300 SLC12A4Q9UP95 1085 aa11.4□□□□□ -0.58
COL4A5-201ENST00000328300 YJEFN3A6XGL0 299 aa11.4□□□□□ -0.58
COL4A5-201ENST00000328300 LATS1O95835 1130 aa11.4□□□□□ -0.58
COL4A5-201ENST00000328300 CRADDP78560 199 aa11.4□□□□□ -0.58
COL4A5-201ENST00000328300 RFX4Q33E94 735 aa11.4□□□□□ -0.58
COL4A5-201ENST00000328300 SULT1C3Q6IMI6 304 aa11.4□□□□□ -0.58
COL4A5-201ENST00000328300 CMTR2Q8IYT2 770 aaKnown RBP11.4□□□□□ -0.58
COL4A5-201ENST00000328300 MICU2Q8IYU8 434 aa11.4□□□□□ -0.58
COL4A5-201ENST00000328300 PCDH19Q8TAB3 1148 aa11.4□□□□□ -0.58
COL4A5-201ENST00000328300 GPR152Q8TDT2 470 aa11.4□□□□□ -0.58
COL4A5-201ENST00000328300 FERD3LQ96RJ6 166 aa11.4□□□□□ -0.58
COL4A5-201ENST00000328300 SH3GL2Q99962 352 aa11.4□□□□□ -0.58
COL4A5-201ENST00000328300 IGKV6-21A0A0C4DH24 114 aa11.4□□□□□ -0.59
COL4A5-201ENST00000328300 CERCAMQ5T4B2 595 aa11.4□□□□□ -0.59
COL4A5-201ENST00000328300 APTXQ7Z2E3 356 aaKnown RBP11.4□□□□□ -0.59
COL4A5-201ENST00000328300 AHI1Q8N157 1196 aa11.4□□□□□ -0.59
COL4A5-201ENST00000328300 OR6Y1Q8NGX8 325 aa11.4□□□□□ -0.59
COL4A5-201ENST00000328300 SEMA3GQ9NS98 782 aa11.4□□□□□ -0.59
COL4A5-201ENST00000328300 LIMD1Q9UGP4 676 aa11.4□□□□□ -0.59
COL4A5-201ENST00000328300 ASF1AQ9Y294 204 aa11.4□□□□□ -0.59
COL4A5-201ENST00000328300 H3BM21 787 aa11.39□□□□□ -0.59
COL4A5-201ENST00000328300 NPHS1O60500 1241 aa11.39□□□□□ -0.59
COL4A5-201ENST00000328300 NSG1P42857 185 aa11.39□□□□□ -0.59
COL4A5-201ENST00000328300 SLC39A4Q6P5W5 647 aa11.39□□□□□ -0.59
COL4A5-201ENST00000328300 ZNF621Q6ZSS3 439 aa11.39□□□□□ -0.59
COL4A5-201ENST00000328300 CAMK1DQ8IU85 385 aa11.39□□□□□ -0.59
COL4A5-201ENST00000328300 PCDH20Q8N6Y1 951 aaKnown RBP11.39□□□□□ -0.59
COL4A5-201ENST00000328300 CDRT15Q96T59 188 aa11.39□□□□□ -0.59
COL4A5-201ENST00000328300 REEP1Q9H902 201 aa11.39□□□□□ -0.59
COL4A5-201ENST00000328300 EIF2S1P05198 315 aaKnown RBP11.39□□□□□ -0.59
COL4A5-201ENST00000328300 UGT2B4P06133 528 aa11.39□□□□□ -0.59
COL4A5-201ENST00000328300 C2P06681 752 aa11.39□□□□□ -0.59
COL4A5-201ENST00000328300 IMPDH2P12268 514 aa11.39□□□□□ -0.59
COL4A5-201ENST00000328300 PTPN5P54829 565 aa11.39□□□□□ -0.59
COL4A5-201ENST00000328300 CTBP1Q13363 440 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms