RNA–Protein interactions for RNA: ENST00000328111.6

DNMT3B-202, Transcript of DNA methyltransferase 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT3B, Length 4,336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-202ENST00000328111 TRMT11Q7Z4G4 463 aaKnown RBP13.78□□□□□ -0.2
DNMT3B-202ENST00000328111 PPM1MQ96MI6 270 aa13.78□□□□□ -0.2
DNMT3B-202ENST00000328111 TMEM39AQ9NV64 488 aa13.78□□□□□ -0.2
DNMT3B-202ENST00000328111 PRKAG3Q9UGI9 489 aa13.78□□□□□ -0.2
DNMT3B-202ENST00000328111 DDX60Q8IY21 1712 aaKnown RBP13.77□□□□□ -0.2
DNMT3B-202ENST00000328111 SLC22A3O75751 556 aa13.77□□□□□ -0.2
DNMT3B-202ENST00000328111 ALDOAP04075 364 aaKnown RBP13.77□□□□□ -0.2
DNMT3B-202ENST00000328111 SPATA31D3P0C874 917 aa13.77□□□□□ -0.2
DNMT3B-202ENST00000328111 HOXA11P31270 313 aaPredicted RBP13.77□□□□□ -0.2
DNMT3B-202ENST00000328111 RAP1GDS1P52306 607 aa13.77□□□□□ -0.2
DNMT3B-202ENST00000328111 CAMK2GQ13555 558 aaPredicted RBP13.77□□□□□ -0.2
DNMT3B-202ENST00000328111 IKBKEQ14164 716 aa13.77□□□□□ -0.2
DNMT3B-202ENST00000328111 GRB14Q14449 540 aa13.77□□□□□ -0.2
DNMT3B-202ENST00000328111 C16orf72Q14CZ0 275 aa13.77□□□□□ -0.2
DNMT3B-202ENST00000328111 POM121L1PQ3SYA9 428 aa13.77□□□□□ -0.2
DNMT3B-202ENST00000328111 RBM44Q6ZP01 1051 aaKnown RBP13.77□□□□□ -0.2
DNMT3B-202ENST00000328111 SPATA31D4Q6ZUB0 917 aa13.77□□□□□ -0.2
DNMT3B-202ENST00000328111 NECAB2Q7Z6G3 386 aa13.77□□□□□ -0.2
DNMT3B-202ENST00000328111 TP53INP2Q8IXH6 220 aa13.77□□□□□ -0.2
DNMT3B-202ENST00000328111 DDHD1Q8NEL9 900 aa13.77□□□□□ -0.2
DNMT3B-202ENST00000328111 STYXQ8WUJ0 223 aa13.77□□□□□ -0.2
DNMT3B-202ENST00000328111 ROGDIQ9GZN7 287 aa13.77□□□□□ -0.2
DNMT3B-202ENST00000328111 PAIP1Q9H074 479 aaKnown RBP13.77□□□□□ -0.2
DNMT3B-202ENST00000328111 SLC7A4O43246 635 aa13.77□□□□□ -0.21
DNMT3B-202ENST00000328111 POLD2P49005 469 aa13.77□□□□□ -0.21
DNMT3B-202ENST00000328111 GDF6Q6KF10 455 aaPredicted RBP13.77□□□□□ -0.21
DNMT3B-202ENST00000328111 SPPL2CQ8IUH8 684 aa13.77□□□□□ -0.21
DNMT3B-202ENST00000328111 FAM47BQ8NA70 645 aa13.77□□□□□ -0.21
DNMT3B-202ENST00000328111 ERLEC1Q96DZ1 483 aa13.77□□□□□ -0.21
DNMT3B-202ENST00000328111 H3BMM5 538 aa13.77□□□□□ -0.21
DNMT3B-202ENST00000328111 DDX5P17844 614 aaKnown RBP13.77□□□□□ -0.21
DNMT3B-202ENST00000328111 CXCR3P49682 368 aa13.77□□□□□ -0.21
DNMT3B-202ENST00000328111 AQP4P55087 323 aa13.77□□□□□ -0.21
DNMT3B-202ENST00000328111 PFKPQ01813 784 aa13.77□□□□□ -0.21
DNMT3B-202ENST00000328111 TSNQ15631 228 aaKnown RBP13.77□□□□□ -0.21
DNMT3B-202ENST00000328111 SLC5A9Q2M3M2 681 aa13.77□□□□□ -0.21
DNMT3B-202ENST00000328111 C6orf52Q5T4I8 152 aa13.77□□□□□ -0.21
DNMT3B-202ENST00000328111 CHADLQ6NUI6 762 aa13.77□□□□□ -0.21
DNMT3B-202ENST00000328111 PAOXQ6QHF9 649 aa13.77□□□□□ -0.21
DNMT3B-202ENST00000328111 SPESP1Q6UW49 350 aa13.77□□□□□ -0.21
DNMT3B-202ENST00000328111 USP45Q70EL2 814 aa13.77□□□□□ -0.21
DNMT3B-202ENST00000328111 CACUL1Q86Y37 369 aa13.77□□□□□ -0.21
DNMT3B-202ENST00000328111 ADCY4Q8NFM4 1077 aa13.77□□□□□ -0.21
DNMT3B-202ENST00000328111 TPD52L3Q96J77 140 aa13.77□□□□□ -0.21
DNMT3B-202ENST00000328111 EBF3Q9H4W6 596 aa13.77□□□□□ -0.21
DNMT3B-202ENST00000328111 ATP13A3Q9H7F0 1226 aa13.77□□□□□ -0.21
DNMT3B-202ENST00000328111 GTF2IRD1Q9UHL9 959 aa13.77□□□□□ -0.21
DNMT3B-202ENST00000328111 FAM149AA5PLN7 773 aa13.76□□□□□ -0.21
DNMT3B-202ENST00000328111 DLX3O60479 287 aa13.76□□□□□ -0.21
DNMT3B-202ENST00000328111 KCNH1O95259 989 aa13.76□□□□□ -0.21
DNMT3B-202ENST00000328111 OTCP00480 354 aa13.76□□□□□ -0.21
DNMT3B-202ENST00000328111 HCAR3P49019 387 aa13.76□□□□□ -0.21
DNMT3B-202ENST00000328111 PGGT1BP53609 377 aa13.76□□□□□ -0.21
DNMT3B-202ENST00000328111 NR1H2P55055 460 aa13.76□□□□□ -0.21
DNMT3B-202ENST00000328111 NRG1Q02297 640 aaPredicted RBP13.76□□□□□ -0.21
DNMT3B-202ENST00000328111 PCLAFQ15004 111 aa13.76□□□□□ -0.21
DNMT3B-202ENST00000328111 MBLAC2Q68D91 279 aa13.76□□□□□ -0.21
DNMT3B-202ENST00000328111 FUT10Q6P4F1 479 aa13.76□□□□□ -0.21
DNMT3B-202ENST00000328111 SYT12Q8IV01 421 aa13.76□□□□□ -0.21
DNMT3B-202ENST00000328111 DBF4BQ8NFT6 615 aa13.76□□□□□ -0.21
DNMT3B-202ENST00000328111 OR13C4Q8NGS5 318 aa13.76□□□□□ -0.21
DNMT3B-202ENST00000328111 GLMNQ92990 594 aa13.76□□□□□ -0.21
DNMT3B-202ENST00000328111 ZNF558Q96NG5 402 aa13.76□□□□□ -0.21
DNMT3B-202ENST00000328111 TCF12Q99081 682 aa13.76□□□□□ -0.21
DNMT3B-202ENST00000328111 TEX12Q9BXU0 123 aa13.76□□□□□ -0.21
DNMT3B-202ENST00000328111 OSBPL2Q9H1P3 480 aa13.76□□□□□ -0.21
DNMT3B-202ENST00000328111 GNPTGQ9UJJ9 305 aa13.76□□□□□ -0.21
DNMT3B-202ENST00000328111 BTAF1O14981 1849 aa13.76□□□□□ -0.21
DNMT3B-202ENST00000328111 SMIM31A0A1B0GVY4 71 aa13.76□□□□□ -0.21
DNMT3B-202ENST00000328111 J3KR12 359 aa13.76□□□□□ -0.21
DNMT3B-202ENST00000328111 LIN7AO14910 233 aaPredicted RBP13.76□□□□□ -0.21
DNMT3B-202ENST00000328111 CHI3L1P36222 383 aaPredicted RBP13.76□□□□□ -0.21
DNMT3B-202ENST00000328111 NDST2P52849 883 aa13.76□□□□□ -0.21
DNMT3B-202ENST00000328111 MLLT6P55198 1093 aaPredicted RBP13.76□□□□□ -0.21
DNMT3B-202ENST00000328111 XIAPP98170 497 aa13.76□□□□□ -0.21
DNMT3B-202ENST00000328111 GALNT2Q10471 571 aa13.76□□□□□ -0.21
DNMT3B-202ENST00000328111 B3GNT6Q6ZMB0 384 aa13.76□□□□□ -0.21
DNMT3B-202ENST00000328111 C11orf74Q86VG3 221 aa13.76□□□□□ -0.21
DNMT3B-202ENST00000328111 SLC7A6OSQ96CW6 309 aaPredicted RBP13.76□□□□□ -0.21
DNMT3B-202ENST00000328111 ZNF570Q96NI8 536 aa13.76□□□□□ -0.21
DNMT3B-202ENST00000328111 MRPL17Q9NRX2 175 aaKnown RBP13.76□□□□□ -0.21
DNMT3B-202ENST00000328111 DYRK1BQ9Y463 629 aa13.76□□□□□ -0.21
DNMT3B-202ENST00000328111 ACSL4O60488 711 aa13.76□□□□□ -0.21
DNMT3B-202ENST00000328111 SIX3O95343 332 aaPredicted RBP13.76□□□□□ -0.21
DNMT3B-202ENST00000328111 PSMB9P28065 219 aa13.76□□□□□ -0.21
DNMT3B-202ENST00000328111 SNRPD1P62314 119 aaKnown RBP13.76□□□□□ -0.21
DNMT3B-202ENST00000328111 RPS24P62847 133 aaKnown RBP13.76□□□□□ -0.21
DNMT3B-202ENST00000328111 CLCQ05315 142 aa13.76□□□□□ -0.21
DNMT3B-202ENST00000328111 TXNDC11Q6PKC3 985 aa13.76□□□□□ -0.21
DNMT3B-202ENST00000328111 TMEM132CQ8N3T6 1108 aa13.76□□□□□ -0.21
DNMT3B-202ENST00000328111 PRR11Q96HE9 360 aaPredicted RBP13.76□□□□□ -0.21
DNMT3B-202ENST00000328111 PPP3R2Q96LZ3 170 aa13.76□□□□□ -0.21
DNMT3B-202ENST00000328111 ZDHHC2Q9UIJ5 367 aa13.76□□□□□ -0.21
DNMT3B-202ENST00000328111 STX16-NPEPL1H3BU86 382 aa13.76□□□□□ -0.21
DNMT3B-202ENST00000328111 ALOX15P16050 662 aaPredicted RBP13.76□□□□□ -0.21
DNMT3B-202ENST00000328111 S100A5P33763 92 aa13.76□□□□□ -0.21
DNMT3B-202ENST00000328111 GPC1P35052 558 aa13.76□□□□□ -0.21
DNMT3B-202ENST00000328111 CSTF3Q12996 717 aaKnown RBP13.76□□□□□ -0.21
DNMT3B-202ENST00000328111 TIFABQ6ZNK6 161 aa13.76□□□□□ -0.21
DNMT3B-202ENST00000328111 ARHGAP36Q6ZRI8 547 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms