RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 SHDQ96IW2 340 aa18.78■□□□□ 0.6
EXOSC3-201ENST00000327304 LRIG1Q96JA1 1093 aa18.78■□□□□ 0.6
EXOSC3-201ENST00000327304 OSBPL1AQ9BXW6 950 aa18.78■□□□□ 0.6
EXOSC3-201ENST00000327304 IQCGQ9H095 443 aaKnown RBP18.78■□□□□ 0.6
EXOSC3-201ENST00000327304 LTB4R2Q9NPC1 389 aa18.78■□□□□ 0.6
EXOSC3-201ENST00000327304 POLR3BQ9NW08 1133 aaPredicted RBP18.78■□□□□ 0.6
EXOSC3-201ENST00000327304 SLC17A7Q9P2U7 560 aa18.78■□□□□ 0.6
EXOSC3-201ENST00000327304 GRID1Q9ULK0 1009 aa18.78■□□□□ 0.6
EXOSC3-201ENST00000327304 SPO11Q9Y5K1 396 aa18.78■□□□□ 0.6
EXOSC3-201ENST00000327304 A0A1W2PQF6 199 aa18.77■□□□□ 0.6
EXOSC3-201ENST00000327304 ANKRD66B4E2M5 251 aa18.77■□□□□ 0.6
EXOSC3-201ENST00000327304 KPNA3O00505 521 aaPredicted RBP18.77■□□□□ 0.6
EXOSC3-201ENST00000327304 SYNCRIPO60506 623 aaKnown RBP18.77■□□□□ 0.6
EXOSC3-201ENST00000327304 HOXB2P14652 356 aa18.77■□□□□ 0.6
EXOSC3-201ENST00000327304 CTPS1P17812 591 aa18.77■□□□□ 0.6
EXOSC3-201ENST00000327304 COL9A1P20849 921 aa18.77■□□□□ 0.6
EXOSC3-201ENST00000327304 CRHR1P34998 444 aa18.77■□□□□ 0.6
EXOSC3-201ENST00000327304 RPL26P61254 145 aaKnown RBP18.77■□□□□ 0.6
EXOSC3-201ENST00000327304 UBXN2BQ14CS0 331 aa18.77■□□□□ 0.6
EXOSC3-201ENST00000327304 HSP90AA5PQ58FG0 334 aa18.77■□□□□ 0.6
EXOSC3-201ENST00000327304 STRA8Q7Z7C7 330 aa18.77■□□□□ 0.6
EXOSC3-201ENST00000327304 MMAAQ8IVH4 418 aaKnown RBP18.77■□□□□ 0.6
EXOSC3-201ENST00000327304 TMIEQ8NEW7 156 aa18.77■□□□□ 0.6
EXOSC3-201ENST00000327304 ISL2Q96A47 359 aa18.77■□□□□ 0.6
EXOSC3-201ENST00000327304 GRAMD1AQ96CP6 724 aa18.77■□□□□ 0.6
EXOSC3-201ENST00000327304 ZNF778Q96MU6 729 aa18.77■□□□□ 0.6
EXOSC3-201ENST00000327304 SRPK1Q96SB4 655 aaKnown RBP18.77■□□□□ 0.6
EXOSC3-201ENST00000327304 TREX1Q9NSU2 369 aa18.77■□□□□ 0.6
EXOSC3-201ENST00000327304 IL1RAPL1Q9NZN1 696 aa18.77■□□□□ 0.6
EXOSC3-201ENST00000327304 SLC17A6Q9P2U8 582 aa18.77■□□□□ 0.6
EXOSC3-201ENST00000327304 RPL26L1Q9UNX3 145 aaKnown RBP18.77■□□□□ 0.6
EXOSC3-201ENST00000327304 MRPS17Q9Y2R5 130 aaKnown RBP18.77■□□□□ 0.6
EXOSC3-201ENST00000327304 KANSL1LA0AUZ9 987 aa18.77■□□□□ 0.59
EXOSC3-201ENST00000327304 PAPSS2O95340 614 aaPredicted RBP18.77■□□□□ 0.59
EXOSC3-201ENST00000327304 ALPIP09923 528 aa18.77■□□□□ 0.59
EXOSC3-201ENST00000327304 GRIA4P48058 902 aa18.77■□□□□ 0.59
EXOSC3-201ENST00000327304 PSMD8P48556 350 aa18.77■□□□□ 0.59
EXOSC3-201ENST00000327304 LIMK2P53671 638 aa18.77■□□□□ 0.59
EXOSC3-201ENST00000327304 ZNF805Q5CZA5 627 aa18.77■□□□□ 0.59
EXOSC3-201ENST00000327304 LRRC73Q5JTD7 316 aa18.77■□□□□ 0.59
EXOSC3-201ENST00000327304 KIAA0930Q6ICG6 404 aaPredicted RBP18.77■□□□□ 0.59
EXOSC3-201ENST00000327304 CACUL1Q86Y37 369 aa18.77■□□□□ 0.59
EXOSC3-201ENST00000327304 CNTN4Q8IWV2 1026 aa18.77■□□□□ 0.59
EXOSC3-201ENST00000327304 BLOC1S5Q8TDH9 187 aa18.77■□□□□ 0.59
EXOSC3-201ENST00000327304 LRRC8CQ8TDW0 803 aa18.77■□□□□ 0.59
EXOSC3-201ENST00000327304 ARRDC3Q96B67 414 aa18.77■□□□□ 0.59
EXOSC3-201ENST00000327304 LMAN1LQ9HAT1 526 aa18.77■□□□□ 0.59
EXOSC3-201ENST00000327304 PLLPQ9Y342 182 aa18.77■□□□□ 0.59
EXOSC3-201ENST00000327304 TSPAN11A1L157 253 aa18.76■□□□□ 0.59
EXOSC3-201ENST00000327304 IL1BP01584 269 aa18.76■□□□□ 0.59
EXOSC3-201ENST00000327304 ALDOAP04075 364 aaKnown RBP18.76■□□□□ 0.59
EXOSC3-201ENST00000327304 FZD5Q13467 585 aa18.76■□□□□ 0.59
EXOSC3-201ENST00000327304 SEPT6Q14141 434 aa18.76■□□□□ 0.59
EXOSC3-201ENST00000327304 STARD3Q14849 445 aa18.76■□□□□ 0.59
EXOSC3-201ENST00000327304 PARS2Q7L3T8 475 aaKnown RBP18.76■□□□□ 0.59
EXOSC3-201ENST00000327304 NLRP9Q7RTR0 991 aa18.76■□□□□ 0.59
EXOSC3-201ENST00000327304 DSG4Q86SJ6 1040 aa18.76■□□□□ 0.59
EXOSC3-201ENST00000327304 NDUFAF2Q8N183 169 aa18.76■□□□□ 0.59
EXOSC3-201ENST00000327304 SPOCK2Q92563 424 aa18.76■□□□□ 0.59
EXOSC3-201ENST00000327304 AGAP2Q99490 1192 aa18.76■□□□□ 0.59
EXOSC3-201ENST00000327304 MCMBPQ9BTE3 642 aa18.76■□□□□ 0.59
EXOSC3-201ENST00000327304 RSPH9Q9H1X1 276 aaPredicted RBP18.76■□□□□ 0.59
EXOSC3-201ENST00000327304 TBC1D17Q9HA65 648 aa18.76■□□□□ 0.59
EXOSC3-201ENST00000327304 CD248Q9HCU0 757 aa18.76■□□□□ 0.59
EXOSC3-201ENST00000327304 IARS2Q9NSE4 1012 aaKnown RBP18.76■□□□□ 0.59
EXOSC3-201ENST00000327304 FGFR1OP2Q9NVK5 253 aa18.76■□□□□ 0.59
EXOSC3-201ENST00000327304 ATXN2Q99700 1313 aaKnown RBP18.76■□□□□ 0.59
EXOSC3-201ENST00000327304 A0A0J9YYE9 177 aa18.75■□□□□ 0.59
EXOSC3-201ENST00000327304 A0A0U1RQS6 177 aa18.75■□□□□ 0.59
EXOSC3-201ENST00000327304 CCDC78A2IDD5 438 aa18.75■□□□□ 0.59
EXOSC3-201ENST00000327304 FAM170BA6NMN3 283 aa18.75■□□□□ 0.59
EXOSC3-201ENST00000327304 C16orf96A6NNT2 1141 aa18.75■□□□□ 0.59
EXOSC3-201ENST00000327304 SNX3O60493 162 aa18.75■□□□□ 0.59
EXOSC3-201ENST00000327304 TRBC1P01850 177 aa18.75■□□□□ 0.59
EXOSC3-201ENST00000327304 HADHAP40939 763 aa18.75■□□□□ 0.59
EXOSC3-201ENST00000327304 ABL2P42684 1182 aa18.75■□□□□ 0.59
EXOSC3-201ENST00000327304 ARCN1P48444 511 aaKnown RBP18.75■□□□□ 0.59
EXOSC3-201ENST00000327304 COPAP53621 1224 aa18.75■□□□□ 0.59
EXOSC3-201ENST00000327304 PDE1BQ01064 536 aa18.75■□□□□ 0.59
EXOSC3-201ENST00000327304 LAMB3Q13751 1172 aa18.75■□□□□ 0.59
EXOSC3-201ENST00000327304 LRRC32Q14392 662 aa18.75■□□□□ 0.59
EXOSC3-201ENST00000327304 ITIH4Q14624 930 aa18.75■□□□□ 0.59
EXOSC3-201ENST00000327304 ESRP1Q6NXG1 681 aaKnown RBP18.75■□□□□ 0.59
EXOSC3-201ENST00000327304 BRAT1Q6PJG6 821 aa18.75■□□□□ 0.59
EXOSC3-201ENST00000327304 CDHR3Q6ZTQ4 885 aa18.75■□□□□ 0.59
EXOSC3-201ENST00000327304 ANKS4BQ8N8V4 417 aa18.75■□□□□ 0.59
EXOSC3-201ENST00000327304 CCDC197Q8NCU1 140 aa18.75■□□□□ 0.59
EXOSC3-201ENST00000327304 FAM111AQ96PZ2 611 aa18.75■□□□□ 0.59
EXOSC3-201ENST00000327304 ELAC2Q9BQ52 826 aaKnown RBP18.75■□□□□ 0.59
EXOSC3-201ENST00000327304 PCMTD2Q9NV79 361 aa18.75■□□□□ 0.59
EXOSC3-201ENST00000327304 DKK3Q9UBP4 350 aa18.75■□□□□ 0.59
EXOSC3-201ENST00000327304 MMP17Q9ULZ9 603 aa18.75■□□□□ 0.59
EXOSC3-201ENST00000327304 PHTF1Q9UMS5 762 aa18.75■□□□□ 0.59
EXOSC3-201ENST00000327304 VCANP13611 3396 aa18.75■□□□□ 0.59
EXOSC3-201ENST00000327304 PLK4O00444 970 aa18.74■□□□□ 0.59
EXOSC3-201ENST00000327304 TPP1O14773 563 aa18.74■□□□□ 0.59
EXOSC3-201ENST00000327304 AURKAO14965 403 aa18.74■□□□□ 0.59
EXOSC3-201ENST00000327304 TIMP2P16035 220 aa18.74■□□□□ 0.59
EXOSC3-201ENST00000327304 MAGEA12P43365 314 aa18.74■□□□□ 0.59
EXOSC3-201ENST00000327304 ZXDAP98168 799 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms