RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 ZNF565Q8N9K5 539 aa10.32□□□□□ -0.76
SF3B2-201ENST00000322535 OR5B17Q8NGF7 314 aa10.32□□□□□ -0.76
SF3B2-201ENST00000322535 HDAC11Q96DB2 347 aa10.32□□□□□ -0.76
SF3B2-201ENST00000322535 ZNF597Q96LX8 424 aa10.32□□□□□ -0.76
SF3B2-201ENST00000322535 GLT1D1Q96MS3 346 aa10.32□□□□□ -0.76
SF3B2-201ENST00000322535 NT5C1BQ96P26 610 aa10.32□□□□□ -0.76
SF3B2-201ENST00000322535 OPALINQ96PE5 141 aa10.32□□□□□ -0.76
SF3B2-201ENST00000322535 DOK1Q99704 481 aa10.32□□□□□ -0.76
SF3B2-201ENST00000322535 SPATA6Q9NWH7 488 aaPredicted RBP10.32□□□□□ -0.76
SF3B2-201ENST00000322535 LRRC37A2A6NM11 1700 aa10.32□□□□□ -0.76
SF3B2-201ENST00000322535 TRAV20A0A0B4J274 112 aa10.32□□□□□ -0.76
SF3B2-201ENST00000322535 TEX51A0A1B0GUA7 166 aa10.32□□□□□ -0.76
SF3B2-201ENST00000322535 PRSS51A0A1B0GVH4 220 aa10.32□□□□□ -0.76
SF3B2-201ENST00000322535 SLC16A3O15427 465 aaKnown RBP10.32□□□□□ -0.76
SF3B2-201ENST00000322535 NPPAP01160 153 aa10.32□□□□□ -0.76
SF3B2-201ENST00000322535 CCND3P30281 292 aaPredicted RBP10.32□□□□□ -0.76
SF3B2-201ENST00000322535 UQCRC1P31930 480 aa10.32□□□□□ -0.76
SF3B2-201ENST00000322535 KLF1Q13351 362 aaPredicted RBP10.32□□□□□ -0.76
SF3B2-201ENST00000322535 ART3Q13508 389 aa10.32□□□□□ -0.76
SF3B2-201ENST00000322535 SV2AQ7L0J3 742 aa10.32□□□□□ -0.76
SF3B2-201ENST00000322535 CCDC36Q8IYA8 594 aa10.32□□□□□ -0.76
SF3B2-201ENST00000322535 PDIK1LQ8N165 341 aa10.32□□□□□ -0.76
SF3B2-201ENST00000322535 GPD1LQ8N335 351 aa10.32□□□□□ -0.76
SF3B2-201ENST00000322535 KYQ8NBH2 561 aa10.32□□□□□ -0.76
SF3B2-201ENST00000322535 ZNF420Q8TAQ5 688 aaPredicted RBP10.32□□□□□ -0.76
SF3B2-201ENST00000322535 CD99L2Q8TCZ2 262 aa10.32□□□□□ -0.76
SF3B2-201ENST00000322535 DNAJB3Q8WWF6 145 aa10.32□□□□□ -0.76
SF3B2-201ENST00000322535 SGK3Q96BR1 496 aa10.32□□□□□ -0.76
SF3B2-201ENST00000322535 CEP19Q96LK0 163 aa10.32□□□□□ -0.76
SF3B2-201ENST00000322535 OSMRQ99650 979 aa10.32□□□□□ -0.76
SF3B2-201ENST00000322535 RHOBTB2Q9BYZ6 727 aa10.32□□□□□ -0.76
SF3B2-201ENST00000322535 TOR3AQ9H497 397 aa10.32□□□□□ -0.76
SF3B2-201ENST00000322535 SMOXQ9NWM0 555 aa10.32□□□□□ -0.76
SF3B2-201ENST00000322535 IL37Q9NZH6 218 aa10.32□□□□□ -0.76
SF3B2-201ENST00000322535 DTLQ9NZJ0 730 aa10.32□□□□□ -0.76
SF3B2-201ENST00000322535 EIF3LQ9Y262 564 aaKnown RBP10.32□□□□□ -0.76
SF3B2-201ENST00000322535 ARID2Q68CP9 1835 aa10.32□□□□□ -0.76
SF3B2-201ENST00000322535 RNF103-CHMP3A0A140T963 221 aa10.31□□□□□ -0.76
SF3B2-201ENST00000322535 GTPBP10A4D1E9 387 aaKnown RBP10.31□□□□□ -0.76
SF3B2-201ENST00000322535 MSCO60682 206 aa10.31□□□□□ -0.76
SF3B2-201ENST00000322535 CALB1P05937 261 aa10.31□□□□□ -0.76
SF3B2-201ENST00000322535 NCAM1P13591 858 aa10.31□□□□□ -0.76
SF3B2-201ENST00000322535 ME2P23368 584 aa10.31□□□□□ -0.76
SF3B2-201ENST00000322535 FMO4P31512 558 aa10.31□□□□□ -0.76
SF3B2-201ENST00000322535 SLC12A2P55011 1212 aa10.31□□□□□ -0.76
SF3B2-201ENST00000322535 FMO1Q01740 532 aa10.31□□□□□ -0.76
SF3B2-201ENST00000322535 SLC18A2Q05940 514 aa10.31□□□□□ -0.76
SF3B2-201ENST00000322535 VAC14Q08AM6 782 aa10.31□□□□□ -0.76
SF3B2-201ENST00000322535 TRIM25Q14258 630 aaKnown RBP10.31□□□□□ -0.76
SF3B2-201ENST00000322535 GRM7Q14831 915 aa10.31□□□□□ -0.76
SF3B2-201ENST00000322535 WDR44Q5JSH3 913 aa10.31□□□□□ -0.76
SF3B2-201ENST00000322535 GALNT12Q8IXK2 581 aa10.31□□□□□ -0.76
SF3B2-201ENST00000322535 LGI2Q8N0V4 545 aa10.31□□□□□ -0.76
SF3B2-201ENST00000322535 MINDY2Q8NBR6 621 aa10.31□□□□□ -0.76
SF3B2-201ENST00000322535 ZNF784Q8NCA9 323 aaPredicted RBP10.31□□□□□ -0.76
SF3B2-201ENST00000322535 SIMC1Q8NDZ2 872 aa10.31□□□□□ -0.76
SF3B2-201ENST00000322535 LPPQ93052 612 aa10.31□□□□□ -0.76
SF3B2-201ENST00000322535 DGCR6LQ9BY27 220 aa10.31□□□□□ -0.76
SF3B2-201ENST00000322535 PPCSQ9HAB8 311 aa10.31□□□□□ -0.76
SF3B2-201ENST00000322535 RBAKQ9NYW8 714 aaPredicted RBP10.31□□□□□ -0.76
SF3B2-201ENST00000322535 PKD2L2Q9NZM6 624 aa10.31□□□□□ -0.76
SF3B2-201ENST00000322535 SORCS3Q9UPU3 1222 aa10.31□□□□□ -0.76
SF3B2-201ENST00000322535 TESMINQ9Y4I5 508 aa10.31□□□□□ -0.76
SF3B2-201ENST00000322535 PCDHGA7Q9Y5G6 932 aa10.31□□□□□ -0.76
SF3B2-201ENST00000322535 MAGEB16A2A368 324 aa10.31□□□□□ -0.76
SF3B2-201ENST00000322535 RAB19A4D1S5 217 aa10.31□□□□□ -0.76
SF3B2-201ENST00000322535 H0Y858 1186 aa10.31□□□□□ -0.76
SF3B2-201ENST00000322535 DAB1O75553 588 aa10.31□□□□□ -0.76
SF3B2-201ENST00000322535 RFPL2O75678 378 aa10.31□□□□□ -0.76
SF3B2-201ENST00000322535 KCNK2O95069 426 aa10.31□□□□□ -0.76
SF3B2-201ENST00000322535 BPGMP07738 259 aa10.31□□□□□ -0.76
SF3B2-201ENST00000322535 TCF4P15884 667 aa10.31□□□□□ -0.76
SF3B2-201ENST00000322535 MMP8P22894 467 aa10.31□□□□□ -0.76
SF3B2-201ENST00000322535 TRIM23P36406 574 aa10.31□□□□□ -0.76
SF3B2-201ENST00000322535 GMPRP36959 345 aa10.31□□□□□ -0.76
SF3B2-201ENST00000322535 SOX9P48436 509 aa10.31□□□□□ -0.76
SF3B2-201ENST00000322535 CYP24A1Q07973 514 aa10.31□□□□□ -0.76
SF3B2-201ENST00000322535 Q3ZCU0 254 aa10.31□□□□□ -0.76
SF3B2-201ENST00000322535 FBXO43Q4G163 708 aa10.31□□□□□ -0.76
SF3B2-201ENST00000322535 DCUN1D2Q6PH85 259 aa10.31□□□□□ -0.76
SF3B2-201ENST00000322535 DBX2Q6ZNG2 339 aa10.31□□□□□ -0.76
SF3B2-201ENST00000322535 FAM110BQ8TC76 370 aa10.31□□□□□ -0.76
SF3B2-201ENST00000322535 RPRD1BQ9NQG5 326 aaKnown RBP10.31□□□□□ -0.76
SF3B2-201ENST00000322535 SDHAF3Q9NRP4 125 aa10.31□□□□□ -0.76
SF3B2-201ENST00000322535 PAQR5Q9NXK6 330 aaPredicted RBP10.31□□□□□ -0.76
SF3B2-201ENST00000322535 SIRPGQ9P1W8 387 aa10.31□□□□□ -0.76
SF3B2-201ENST00000322535 CXorf49A8MYA2 514 aaPredicted RBP10.3□□□□□ -0.76
SF3B2-201ENST00000322535 PHGDHO43175 533 aaKnown RBP10.3□□□□□ -0.76
SF3B2-201ENST00000322535 KRT37O76014 449 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 VNN1O95497 513 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 CTSHP09668 335 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 ACAT1P24752 427 aaKnown RBP10.3□□□□□ -0.76
SF3B2-201ENST00000322535 GDF10P55107 478 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 UBE3AQ05086 875 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 TARDBPQ13148 414 aaKnown RBP eCLIP10.3□□□□□ -0.76
SF3B2-201ENST00000322535 TBRG1Q3YBR2 411 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 C6orf10Q5SRN2 563 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 IER5Q5VY09 327 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 KIAA1841Q6NSI8 718 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 SLCO6A1Q86UG4 719 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms