RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 CAPN15O75808 1086 aa9.73□□□□□ -0.85
COL12A1-201ENST00000322507 SPAG4Q9NPE6 437 aa9.73□□□□□ -0.85
COL12A1-201ENST00000322507 SAE1Q9UBE0 346 aaPredicted RBP9.73□□□□□ -0.85
COL12A1-201ENST00000322507 HEATR1Q9H583 2144 aaKnown RBP9.73□□□□□ -0.85
COL12A1-201ENST00000322507 DISC1C4P0D8 188 aa9.73□□□□□ -0.85
COL12A1-201ENST00000322507 ITGA10O75578 1167 aa9.73□□□□□ -0.85
COL12A1-201ENST00000322507 SLC35F3Q8IY50 421 aa9.73□□□□□ -0.85
COL12A1-201ENST00000322507 UPF1Q92900 1129 aaKnown RBP eCLIP9.73□□□□□ -0.85
COL12A1-201ENST00000322507 TSNAXQ99598 290 aaKnown RBP9.73□□□□□ -0.85
COL12A1-201ENST00000322507 CKLFQ9UBR5 152 aa9.73□□□□□ -0.85
COL12A1-201ENST00000322507 CDC42P60953 191 aa9.73□□□□□ -0.85
COL12A1-201ENST00000322507 ERCC6L2Q5T890 1561 aa9.73□□□□□ -0.85
COL12A1-201ENST00000322507 OR6B1O95007 311 aa9.73□□□□□ -0.85
COL12A1-201ENST00000322507 RHOAP61586 193 aa9.73□□□□□ -0.85
COL12A1-201ENST00000322507 MYBPC1Q00872 1141 aa9.73□□□□□ -0.85
COL12A1-201ENST00000322507 SMARCB1Q12824 385 aa9.73□□□□□ -0.85
COL12A1-201ENST00000322507 IL18Q14116 193 aa9.73□□□□□ -0.85
COL12A1-201ENST00000322507 ZNF852Q6ZMS4 543 aa9.73□□□□□ -0.85
COL12A1-201ENST00000322507 TDRPQ86YL5 185 aa9.73□□□□□ -0.85
COL12A1-201ENST00000322507 CBWD2Q8IUF1 395 aa9.73□□□□□ -0.85
COL12A1-201ENST00000322507 ZNF614Q8N883 585 aa9.73□□□□□ -0.85
COL12A1-201ENST00000322507 OR7G2Q8NG99 324 aa9.73□□□□□ -0.85
COL12A1-201ENST00000322507 STAG3L4Q8TBR4 150 aa9.73□□□□□ -0.85
COL12A1-201ENST00000322507 ACTL9Q8TC94 416 aa9.73□□□□□ -0.85
COL12A1-201ENST00000322507 SOCS4Q8WXH5 440 aa9.73□□□□□ -0.85
COL12A1-201ENST00000322507 LRRC4BQ9NT99 713 aa9.73□□□□□ -0.85
COL12A1-201ENST00000322507 URADA6NGE7 173 aa9.73□□□□□ -0.85
COL12A1-201ENST00000322507 IFNA2P01563 188 aa9.73□□□□□ -0.85
COL12A1-201ENST00000322507 TLX1P31314 330 aaPredicted RBP9.73□□□□□ -0.85
COL12A1-201ENST00000322507 DLSTP36957 453 aa9.73□□□□□ -0.85
COL12A1-201ENST00000322507 PGS1Q32NB8 556 aa9.73□□□□□ -0.85
COL12A1-201ENST00000322507 FAM122CQ6P4D5 195 aa9.73□□□□□ -0.85
COL12A1-201ENST00000322507 CFAP97Q9P2B7 532 aa9.73□□□□□ -0.85
COL12A1-201ENST00000322507 ARL5AQ9Y689 179 aa9.73□□□□□ -0.85
COL12A1-201ENST00000322507 C1orf167Q5SNV9 1468 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 CD40LGP29965 261 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 PRKAR1BP31321 381 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 CRTC3Q6UUV7 619 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 FAM83HQ6ZRV2 1179 aaPredicted RBP9.72□□□□□ -0.85
COL12A1-201ENST00000322507 DGLUCYQ7Z3D6 616 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 FUKQ8N0W3 1084 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 ITFG1Q8TB96 612 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 DNAJC16Q9Y2G8 782 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 NUAK1O60285 661 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 GRIK3Q13003 919 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 VWA5B1Q5TIE3 1220 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 TMC7Q7Z402 723 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 DGKBQ9Y6T7 804 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 IL2P60568 153 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 AGKQ53H12 422 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 ASCC1Q8N9N2 400 aaKnown RBP9.72□□□□□ -0.85
COL12A1-201ENST00000322507 FOXN1O15353 648 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 ACADMP11310 421 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 ELF3P78545 371 aaPredicted RBP9.72□□□□□ -0.85
COL12A1-201ENST00000322507 PTSQ03393 145 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 ZDHHC20Q5W0Z9 365 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 ZNF248Q8NDW4 579 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 SYT4Q9H2B2 425 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 ST3GAL5Q9UNP4 418 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 ETS1P14921 441 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 PROZP22891 400 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 NTSP30990 170 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 TIE1P35590 1138 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 CASRP41180 1078 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 GTF2IRD2BQ6EKJ0 949 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 GTF2IRD2Q86UP8 949 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 C3orf49Q96BT1 292 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 MRPL57Q9BQC6 102 aaKnown RBP9.72□□□□□ -0.85
COL12A1-201ENST00000322507 HGH1Q9BTY7 390 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 ZBTB14O43829 449 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 ITGAVP06756 1048 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 CRADDP78560 199 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 COL28A1Q2UY09 1125 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 PIWIL4Q7Z3Z4 852 aaKnown RBP9.72□□□□□ -0.85
COL12A1-201ENST00000322507 GALNT7Q86SF2 657 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 C2orf49Q9BVC5 232 aaPredicted RBP9.72□□□□□ -0.85
COL12A1-201ENST00000322507 FAIM2Q9BWQ8 316 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 IRX2Q9BZI1 471 aaPredicted RBP9.72□□□□□ -0.85
COL12A1-201ENST00000322507 POLR1EQ9GZS1 481 aaKnown RBP9.72□□□□□ -0.85
COL12A1-201ENST00000322507 CPVLQ9H3G5 476 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 PCYOX1Q9UHG3 505 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 CEP170BQ9Y4F5 1589 aaPredicted RBP9.72□□□□□ -0.85
COL12A1-201ENST00000322507 CHST10O43529 356 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 SLC16A8O95907 504 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 DHDDSQ86SQ9 333 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 UNC93AQ86WB7 457 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 SLC41A3Q96GZ6 507 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 UROC1Q96N76 676 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 PRMT8Q9NR22 394 aaPredicted RBP9.72□□□□□ -0.85
COL12A1-201ENST00000322507 TBC1D30Q9Y2I9 924 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 CCL15-CCL14A0A0B4J2E2 113 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 NEDD8-MDP1E9PL57 170 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 PLIN3O60664 434 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 E2F2Q14209 437 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 CCL15Q16663 113 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 NOMO2Q5JPE7 1267 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 TTC7BQ86TV6 843 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 ITPKCQ96DU7 683 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 FAM126AQ9BYI3 521 aaPredicted RBP9.72□□□□□ -0.85
COL12A1-201ENST00000322507 ERVK-11Q9UQG0 969 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms