RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 CDKN1CP49918 316 aaPredicted RBP15.38■□□□□ 0.05
PDLIM5-202ENST00000318007 LIPIQ6XZB0 460 aa15.38■□□□□ 0.05
PDLIM5-202ENST00000318007 DPPA4Q7L190 304 aa15.38■□□□□ 0.05
PDLIM5-202ENST00000318007 TMEM135Q86UB9 458 aa15.38■□□□□ 0.05
PDLIM5-202ENST00000318007 GPR26Q8NDV2 337 aa15.38■□□□□ 0.05
PDLIM5-202ENST00000318007 GSDMBQ8TAX9 411 aa15.38■□□□□ 0.05
PDLIM5-202ENST00000318007 CXorf40AQ8TE69 158 aa15.38■□□□□ 0.05
PDLIM5-202ENST00000318007 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.38■□□□□ 0.058e-7■■■■■ 60.7
PDLIM5-202ENST00000318007 LRRC39Q96DD0 335 aa15.38■□□□□ 0.05
PDLIM5-202ENST00000318007 ATXN7L3BQ96GX2 97 aa15.38■□□□□ 0.05
PDLIM5-202ENST00000318007 EPHX3Q9H6B9 360 aa15.38■□□□□ 0.05
PDLIM5-202ENST00000318007 FZD3Q9NPG1 666 aa15.38■□□□□ 0.05
PDLIM5-202ENST00000318007 NCKAP1Q9Y2A7 1128 aa15.38■□□□□ 0.05
PDLIM5-202ENST00000318007 DOCK9Q9BZ29 2069 aa15.38■□□□□ 0.05
PDLIM5-202ENST00000318007 A0A1W2PQ67 120 aa15.38■□□□□ 0.05
PDLIM5-202ENST00000318007 AREL1O15033 823 aa15.38■□□□□ 0.05
PDLIM5-202ENST00000318007 LZTS3O60299 673 aaPredicted RBP15.38■□□□□ 0.05
PDLIM5-202ENST00000318007 UGT1A9O60656 530 aa15.38■□□□□ 0.05
PDLIM5-202ENST00000318007 USP1O94782 785 aa15.38■□□□□ 0.05
PDLIM5-202ENST00000318007 ALDH1A2O94788 518 aa15.38■□□□□ 0.05
PDLIM5-202ENST00000318007 BPIP17213 487 aa15.38■□□□□ 0.05
PDLIM5-202ENST00000318007 ARNTP27540 789 aa15.38■□□□□ 0.05
PDLIM5-202ENST00000318007 MC4RP32245 332 aa15.38■□□□□ 0.05
PDLIM5-202ENST00000318007 RPS9P46781 194 aaKnown RBP15.38■□□□□ 0.05
PDLIM5-202ENST00000318007 PPP2CBP62714 309 aa15.38■□□□□ 0.05
PDLIM5-202ENST00000318007 PPP2CAP67775 309 aa15.38■□□□□ 0.05
PDLIM5-202ENST00000318007 ELP6Q0PNE2 266 aa15.38■□□□□ 0.05
PDLIM5-202ENST00000318007 SKIDA1Q1XH10 827 aa15.38■□□□□ 0.05
PDLIM5-202ENST00000318007 KBTBD12Q3ZCT8 623 aa15.38■□□□□ 0.05
PDLIM5-202ENST00000318007 KCNMB4Q86W47 210 aa15.38■□□□□ 0.05
PDLIM5-202ENST00000318007 RASSF3Q86WH2 238 aa15.38■□□□□ 0.05
PDLIM5-202ENST00000318007 UGT1A7Q9HAW7 530 aa15.38■□□□□ 0.05
PDLIM5-202ENST00000318007 UGT1A10Q9HAW8 530 aa15.38■□□□□ 0.05
PDLIM5-202ENST00000318007 UGT1A8Q9HAW9 530 aa15.38■□□□□ 0.05
PDLIM5-202ENST00000318007 IARS2Q9NSE4 1012 aaKnown RBP15.38■□□□□ 0.05
PDLIM5-202ENST00000318007 TREX1Q9NSU2 369 aa15.38■□□□□ 0.05
PDLIM5-202ENST00000318007 HACD3Q9P035 362 aa15.38■□□□□ 0.05
PDLIM5-202ENST00000318007 IL17CQ9P0M4 197 aa15.38■□□□□ 0.05
PDLIM5-202ENST00000318007 DLGAP2Q9P1A6 1054 aa15.38■□□□□ 0.05
PDLIM5-202ENST00000318007 PPIL1Q9Y3C6 166 aa15.38■□□□□ 0.05
PDLIM5-202ENST00000318007 CCDC162PA2VCL2 907 aa15.37■□□□□ 0.05
PDLIM5-202ENST00000318007 CXorf49A8MYA2 514 aaPredicted RBP15.37■□□□□ 0.05
PDLIM5-202ENST00000318007 POC1B-GALNT4F8VUJ3 575 aa15.37■□□□□ 0.05
PDLIM5-202ENST00000318007 GOT2P00505 430 aaKnown RBP15.37■□□□□ 0.05
PDLIM5-202ENST00000318007 LONRF1Q17RB8 773 aa15.37■□□□□ 0.05
PDLIM5-202ENST00000318007 ZRANB3Q5FWF4 1079 aa15.37■□□□□ 0.05
PDLIM5-202ENST00000318007 TRMT10CQ7L0Y3 403 aaKnown RBP15.37■□□□□ 0.05
PDLIM5-202ENST00000318007 DENND6AQ8IWF6 608 aa15.37■□□□□ 0.05
PDLIM5-202ENST00000318007 PELI3Q8N2H9 469 aa15.37■□□□□ 0.05
PDLIM5-202ENST00000318007 TMEM105Q8N8V8 129 aa15.37■□□□□ 0.05
PDLIM5-202ENST00000318007 CERS2Q96G23 380 aa15.37■□□□□ 0.05
PDLIM5-202ENST00000318007 RANBP9Q96S59 729 aa15.37■□□□□ 0.05
PDLIM5-202ENST00000318007 LYSMD1Q96S90 227 aa15.37■□□□□ 0.05
PDLIM5-202ENST00000318007 FBRSQ9HAH7 460 aa15.37■□□□□ 0.05
PDLIM5-202ENST00000318007 SMYD2Q9NRG4 433 aa15.37■□□□□ 0.05
PDLIM5-202ENST00000318007 PLAAQ9Y263 795 aa15.37■□□□□ 0.05
PDLIM5-202ENST00000318007 CACNA1IQ9P0X4 2223 aa15.37■□□□□ 0.05
PDLIM5-202ENST00000318007 MAGEB16A2A368 324 aa15.36■□□□□ 0.05
PDLIM5-202ENST00000318007 FAM155BO75949 473 aa15.36■□□□□ 0.05
PDLIM5-202ENST00000318007 RECQL5O94762 991 aaPredicted RBP15.36■□□□□ 0.05
PDLIM5-202ENST00000318007 PRAMEF1O95521 474 aa15.36■□□□□ 0.05
PDLIM5-202ENST00000318007 APBB3O95704 486 aa15.36■□□□□ 0.05
PDLIM5-202ENST00000318007 PAK4O96013 591 aaPredicted RBP15.36■□□□□ 0.05
PDLIM5-202ENST00000318007 UGT1A6P19224 532 aa15.36■□□□□ 0.05
PDLIM5-202ENST00000318007 UGT1A1P22309 533 aa15.36■□□□□ 0.05
PDLIM5-202ENST00000318007 UGT1A4P22310 534 aa15.36■□□□□ 0.05
PDLIM5-202ENST00000318007 UGT1A3P35503 534 aa15.36■□□□□ 0.05
PDLIM5-202ENST00000318007 UGT1A5P35504 534 aa15.36■□□□□ 0.05
PDLIM5-202ENST00000318007 CTBP1Q13363 440 aa15.36■□□□□ 0.05
PDLIM5-202ENST00000318007 CASP8Q14790 479 aa15.36■□□□□ 0.05
PDLIM5-202ENST00000318007 SPANXN3Q5MJ09 141 aa15.36■□□□□ 0.05
PDLIM5-202ENST00000318007 CEP128Q6ZU80 1094 aa15.36■□□□□ 0.05
PDLIM5-202ENST00000318007 HCAR2Q8TDS4 363 aa15.36■□□□□ 0.05
PDLIM5-202ENST00000318007 STYXQ8WUJ0 223 aa15.36■□□□□ 0.05
PDLIM5-202ENST00000318007 HNRNPLLQ8WVV9 542 aaKnown RBP15.36■□□□□ 0.05
PDLIM5-202ENST00000318007 TOE1Q96GM8 510 aaKnown RBP15.36■□□□□ 0.05
PDLIM5-202ENST00000318007 CDKN2AIPNLQ96HQ2 116 aa15.36■□□□□ 0.05
PDLIM5-202ENST00000318007 TTC25Q96NG3 672 aa15.36■□□□□ 0.05
PDLIM5-202ENST00000318007 BTBD1Q9H0C5 482 aa15.36■□□□□ 0.05
PDLIM5-202ENST00000318007 TRABDQ9H4I3 376 aa15.36■□□□□ 0.05
PDLIM5-202ENST00000318007 NLE1Q9NVX2 485 aaPredicted RBP15.36■□□□□ 0.05
PDLIM5-202ENST00000318007 MARCH4Q9P2E8 410 aaPredicted RBP15.36■□□□□ 0.05
PDLIM5-202ENST00000318007 LRRK1Q38SD2 2015 aa15.36■□□□□ 0.05
PDLIM5-202ENST00000318007 A0A1W2PQU0 124 aa15.36■□□□□ 0.05
PDLIM5-202ENST00000318007 K7ESM1 405 aa15.36■□□□□ 0.05
PDLIM5-202ENST00000318007 PLRG1O43660 514 aaKnown RBP15.36■□□□□ 0.05
PDLIM5-202ENST00000318007 RPP40O75818 363 aaKnown RBP15.36■□□□□ 0.05
PDLIM5-202ENST00000318007 PAMP19021 973 aa15.36■□□□□ 0.05
PDLIM5-202ENST00000318007 NFKBIAP25963 317 aa15.36■□□□□ 0.05
PDLIM5-202ENST00000318007 CA5AP35218 305 aa15.36■□□□□ 0.05
PDLIM5-202ENST00000318007 PHBP35232 272 aa15.36■□□□□ 0.05
PDLIM5-202ENST00000318007 IFFO1Q0D2I5 559 aa15.36■□□□□ 0.05
PDLIM5-202ENST00000318007 PEX6Q13608 980 aa15.36■□□□□ 0.05
PDLIM5-202ENST00000318007 ZNF470Q6ECI4 717 aa15.36■□□□□ 0.05
PDLIM5-202ENST00000318007 PPM1NQ8N819 430 aa15.36■□□□□ 0.05
PDLIM5-202ENST00000318007 EPS8L3Q8TE67 593 aaKnown RBP15.36■□□□□ 0.05
PDLIM5-202ENST00000318007 ANKRD7Q92527 254 aa15.36■□□□□ 0.05
PDLIM5-202ENST00000318007 SNX19Q92543 992 aa15.36■□□□□ 0.05
PDLIM5-202ENST00000318007 SPOCK2Q92563 424 aa15.36■□□□□ 0.05
PDLIM5-202ENST00000318007 SPATA16Q9BXB7 569 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms